| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4587871 = | NA (NA) | 11 (0.100) | 6/162 | NT | NA | intergenic (+8/+38) | mrr/yjiA | methylated adenine and cytosine restriction protein/metal‑binding GTPase |
| ? | NC_000913 | 4587900 = | NA (NA) | intergenic (+37/+9) | mrr/yjiA | methylated adenine and cytosine restriction protein/metal‑binding GTPase | |||||
ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4587977‑4587871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggccCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC > NC_000913/4587900‑4587998 ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCA > 1:429027/1‑100 GGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCAT > 1:2822260/1‑99 GTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCC > 2:1832875/1‑100 GTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCC > 2:1771142/1‑100 GTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGG > 2:449428/1‑100 AGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCG > 1:2862154/1‑100 ttccgatctGGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGA < 2:1257985/91‑1 GGGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATA > 1:1453671/1‑100 GGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGAagatcggaa > 1:1257981/1‑91 GGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAA > 2:760646/1‑100 GGCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAA > 2:2285937/1‑100 GCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAA > 2:1239500/1‑100 GCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAA > 1:1612023/1‑100 GCCGGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGAAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAA > 2:322891/1‑100 GGATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACAC > 1:3130223/1‑100 GATAAGGCGCAGCCGCATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACC > 2:1889750/1‑100 ATCCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTT > 2:1524810/1‑100 CCGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTT > 2:958120/1‑100 CCGGCCCATAACCCCTTACTTCATCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTT > 1:1981806/1‑100 CGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTT > 2:360253/1‑100 CGGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTT < 1:2664976/100‑1 GGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTC > 2:1351234/1‑100 GGCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTC > 2:865582/1‑100 GCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCA < 1:1753358/100‑1 GCCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCA < 2:3180774/100‑1 CCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCAT > 2:2232419/1‑100 CCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCAT > 2:2556186/1‑100 CCCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCAT < 2:3313834/100‑1 CCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC > 2:1444482/1‑100 CCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC < 2:388157/100‑1 CCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC < 2:532549/100‑1 ATGGTGTTTATCGGGATCCAGCTGCCGGAGGAAGAGATTCGGGCTGCGTTTGCGGGGTTGAGGAAGTAAGGGGTTATGGGCCGGATAAGGCGCAGCCGCATCCGGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4587977‑4587871‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggccCATAACCCCTTACTTCCTCAACCCCGCAAACGCAGCCCGAATCTCTTCCTCCGGCAGCTGGATCCCGATAAACACCATCGTGCTATGCGGTTTTTCATC > NC_000913/4587900‑4587998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |