| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4599652 = | 116 (0.940) | 6 (0.050) | 6/164 | NT | 5.6% | intergenic (‑211/+43) | opgB/yjjA | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein |
| ? | NC_000913 | 4599685 = | 96 (0.850) | intergenic (‑244/+10) | opgB/yjjA | OPG periplasmic biosynthetic phosphoglycerol transferases I (membrane‑bound) and II (soluble)/putative DUF2501 family periplasmic protein | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
GAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4599757‑4599652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcggcGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGT > NC_000913/4599685‑4599780 GAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGA > 1:3141450/1‑100 GGTGAAAACCAACGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGG > 2:2251213/1‑100 GTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGC < 2:2057179/100‑1 AACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACA > 2:2434508/1‑100 CCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTT > 1:2546550/1‑100 GCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGG > 1:2892112/1‑100 AAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTT > 2:2019976/1‑100 AACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTATTAACACCAGATCGCAGGCTTTGGTTT > 1:1638076/1‑99 GCCGCGTTTTAGCTGTTACCCGGCTGACGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCAC > 1:3094435/1‑100 CGCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGAT > 2:938748/1‑100 GCGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATG < 1:1257041/100‑1 CGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGT > 1:713013/1‑100 CGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGT < 2:1559059/100‑1 CGGCGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGT > 2:1975362/1‑100 GAAAAGGTGAAAACCAAAGCCTGCGATCTGGTGTTAAAACAGGGGCTGAACTTCATTTCCTGAACCGCGAAACGCCGCGTTTTAGCTGTTACCCGGCTGACGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/4599757‑4599652‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑acgcggcGTTTCGCGGTTCAGGAAATGAAGTTCAGCCCCTGTTTTAACACCAGATCGCAGGCTTTGGTTTTCACCTTTTCTGCCAGCGGAGTTGTTCCGATGT > NC_000913/4599685‑4599780 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |