| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 881937 = | NA (NA) | 7 (0.060) | 6/156 | NT | NA | intergenic (+8/+39) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6a/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx |
| ? | NC_000913 | 881970 = | NA (NA) | intergenic (+41/+6) | dacC/deoR | D‑alanyl‑D‑alanine carboxypeptidase; penicillin‑binding protein 6a/deoxyribose‑5‑phosphate‑inducible deoxyribose operon transcriptional repressor; repressor of nupG and tsx | |||||
GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/882045‑881937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG > NC_000913/881970‑882068 GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCA > 1:1101307/1‑100 GCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCAT < 1:298233/99‑1 CGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCC < 2:3341040/100‑1 GATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCG < 2:1906476/100‑1 GATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCG > 2:1582939/1‑100 ATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGG < 1:137979/100‑1 ATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGG < 1:1880740/100‑1 TTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 2:1608907/100‑1 TTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGT < 1:3332837/100‑1 TGTTGCCTGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATAACGTTTCGCGCCATCCGGTT < 1:1082495/100‑1 GTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTA > 1:2530525/1‑100 TTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT > 1:2459941/1‑100 CGTATAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGG > 2:1989265/1‑100 atcTAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGC < 2:1158210/97‑1 TATAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCA > 1:1008652/1‑100 TAACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAAC > 1:943525/1‑100 AACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAgat > 1:1158206/1‑97 ACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAA > 2:523589/1‑100 ACCGGATGACGTTTCGCGCCATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAA > 2:2529659/1‑100 CATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAA < 2:3197846/100‑1 CATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAA > 1:2480610/1‑100 CATCCGGTTATACGTCATTAATACATCAACTTAATGCGCCGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAA < 1:574469/100‑1 ataCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAA > 1:2549725/4‑100 ATCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAA < 1:180141/100‑1 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG < 1:3093702/100‑1 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG > 2:3263595/1‑100 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG > 2:3093719/1‑100 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG > 2:2949355/1‑100 TCCGGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAG < 2:1609344/100‑1 aCGGTTATACGTCATTAATACATCTACTTAATGCGCTGCGTCTGCGCGTACTTCCCATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGC < 1:2039524/99‑1 gggTATACGTCATGAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATGGCTCACCACAATATCAAAGCG > 1:2566273/4‑99 GGTTATACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGT < 2:103535/100‑1 TACGTCATTAATACATCAACTTAATGCGCTGGGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCCCCACAATATCAAAGCGTTTCAG < 1:949636/100‑1 TACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG > 2:1474655/1‑100 GAGCGATTGTTGCCCGGAAGATGAGTATGTGAAGTACGCGCAGACGCAGCGCATTAAGTTGATGTATTAATGACGTATAACCGGATGACGTTTCGCGCCATCCGGTTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/882045‑881937‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑catccggttatACGTCATTAATACATCAACTTAATGCGCTGCGTCTGCGCGTACTTCACATACTCATCTTCCGGGCAACAATCGCTCACCACAATATCAAAGCGTTTCAG > NC_000913/881970‑882068 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |