New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620116NA (NA)9 (0.080) 6/166 NT 100% coding (925/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620152 0 (0.000)coding (961/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

ACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATA  >  NC_000913/3620048‑3620212
                                                                    |                                                                                                
aCAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACG                                                                   >  1:2546621‑M2/1‑100 (MQ=255)
 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                  <  2:682744‑M2/100‑1 (MQ=255)
 cAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGC                                                                  >  2:300127‑M2/1‑100 (MQ=255)
  tacGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACG                                                                   >  1:1480918‑M2/2‑98 (MQ=255)
  aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                 <  1:74697‑M2/100‑1 (MQ=255)
  aaCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                 >  2:2693303‑M2/1‑100 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                <  1:930028‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                <  2:1217930‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                <  2:1769853‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGG                                                                <  2:2212509‑M2/100‑1 (MQ=255)
   aCGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGAAGCCACG                                                                   <  2:1480924‑M2/97‑1 (MQ=255)
    cGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCACCGCTGGTGCGCTATGGCTGGACGCCACGCG                                                                 <  1:2134187‑M2/98‑1 (MQ=255)
                                                      agaATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggc             <  1:2618525‑M2/100‑50 (MQ=255)
                                                       gaATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggca            <  2:1543330‑M2/100‑51 (MQ=255)
                                                            tACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacag       <  2:2436505‑M2/100‑56 (MQ=255)
                                                              ccTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacggatg      <  2:1749921‑M2/100‑58 (MQ=255)
                                                               cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacg    <  1:2983021‑M2/100‑59 (MQ=255)
                                                               cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacg    <  2:1627939‑M2/100‑59 (MQ=255)
                                                               cTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacg    <  1:1315667‑M2/100‑59 (MQ=255)
                                                                 gccgcgccgcTGGTGCGCTATGGCTGGACGCCACGCGGCGcggcaggtaaattctccgggtattccgggtcgtgcgtcagccacacggcagacagacgga  <  2:2563634‑M2/100‑61 (MQ=255)
                                                                    |                                                                                                
ACAACGGCATCCGTCTGTCTGCCGTGTGGCTGACGCACGACCCGGAATACCCGGAGAATTTACCTGCCGCGCCGCTGGTGCGCTATGGCTGGACGCCACGCGGCGAACTGGCGGTGGTGTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATA  >  NC_000913/3620048‑3620212

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.