New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4457231NA (NA)18 (0.160) 10/164 NT NA noncoding (47/84 nt) REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 = 4457264 NA (NA)noncoding (80/84 nt) REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences REP337 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 189 total aligned reads displayed.

CGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCG  >  NC_000913/4457133‑4457330
                                                                                                  |                                                                                                   
cGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTg                                                                                                    >  1:1377996‑M1/1‑99 (MQ=255)
  aagaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcc                                                                                                  <  2:2542564‑M1/100‑4 (MQ=255)
  aagaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcc                                                                                                  <  2:794852‑M1/100‑4 (MQ=255)
   agaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcct                                                                                                 <  2:2747825‑M1/100‑5 (MQ=255)
   agaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcct                                                                                                 >  2:137819‑M1/1‑96 (MQ=255)
   agaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcct                                                                                                 <  2:3085175‑M1/100‑5 (MQ=255)
    gaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctg                                                                                                >  2:2214072‑M1/1‑95 (MQ=255)
    gaagGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctg                                                                                                <  2:3160864‑M1/100‑6 (MQ=255)
       ggCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATg                                                                                             <  1:2317698/100‑1 (MQ=255)
        gCGGAAGCCGCGGAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGGCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctg                                                                                                <  1:2025315‑M1/96‑6 (MQ=255)
        gCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                                                            <  1:1079823/100‑1 (MQ=255)
        gCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGc                                                                                            >  1:2684994/1‑100 (MQ=255)
           gAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGAc                                                                                         <  2:290602/100‑1 (MQ=255)
               ccGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCtt                                                                                     >  2:3397296/1‑100 (MQ=255)
               ccGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCtt                                                                                     <  2:543740/100‑1 (MQ=255)
                  cgcAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGAt                                                                                  <  2:3336850/100‑1 (MQ=255)
                   gcAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATg                                                                                 <  2:134989/100‑1 (MQ=255)
                         aTTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCtt                                                                           <  1:1409306/100‑1 (MQ=255)
                            cGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATC                                                                        >  1:3100374‑M2/1‑100 (MQ=255)
                            cGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTAT                                                                         >  1:615763‑M2/1‑99 (MQ=255)
                             ggCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgatgcgacgcatcaagcgtcgcatca                                                                       <  2:1050958‑M1/100‑31 (MQ=255)
                               ccTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGG                                                                     >  2:71881‑M2/1‑100 (MQ=255)
                                cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggc                                                                    <  2:900364‑M1/100‑34 (MQ=255)
                                cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggc                                                                    <  1:1630762‑M1/100‑34 (MQ=255)
                                cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggc                                                                    <  1:3252050‑M1/100‑34 (MQ=255)
                                cTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggc                                                                    <  2:2572727‑M1/100‑34 (MQ=255)
                                 ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggca                                                                   <  1:303612‑M1/100‑35 (MQ=255)
                                 ttAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                                                                   <  2:1506543/100‑1 (MQ=255)
                                 ttAGCCAGACCTAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGACTCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGcc                                                                   <  1:2040559/100‑1 (MQ=25)
                                  tAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggcac                                                                  <  2:538920‑M1/100‑36 (MQ=255)
                                    gCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTAc                                                                >  1:3052551/1‑100 (MQ=255)
                                    gCCAGATATAGTATGCGTAGGCCGGATAAGGCATTCACGCCGAATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTAc                                                                <  1:2399568/100‑1 (MQ=255)
                                     ccAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACa                                                               <  1:1924669/100‑1 (MQ=255)
                                       aggtatagtaCGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgacaacacgcatcaagcgtcgcatcaggcactatgc                                                             <  1:2253603‑M1/97‑41 (MQ=255)
                                       aGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTgcctgataagacgcatcaagcgtcgcatcaggcactatgc                                                             <  1:802295‑M1/100‑41 (MQ=255)
                                       aGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAgg                                                             <  1:2167505/100‑1 (MQ=255)
                                        gATATAGTATGCGTAGGCCGGATAAGGAGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACCCTTGATGCGTCTTATCAGGcc                                                                   >  1:2744316/1‑93 (MQ=255)
                                         atatAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTg                                                           <  2:171316/100‑1 (MQ=255)
                                          tataGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGc                                                          >  1:2883212/1‑100 (MQ=255)
                                          tataGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGc                                                          >  2:2344658/1‑100 (MQ=255)
                                              gTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCg                                                      >  1:2499102/1‑100 (MQ=255)
                                              gTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCg                                                      >  2:3106033/1‑100 (MQ=255)
                                               tATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGt                                                     <  1:920574/100‑1 (MQ=255)
                                                  gCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATc                                                  >  1:2005348/1‑100 (MQ=255)
                                                     tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCgg                                               <  2:198597/100‑1 (MQ=255)
                                                     tAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCgg                                               <  1:300533/100‑1 (MQ=255)
                                                      aGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGc                                              >  2:3313408/1‑100 (MQ=255)
                                                      aGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCATCAAGCGTCGCATCAGGCactatgctcaaatgccggatgc                                              >  1:1434691‑M2/1‑78 (MQ=255)
                                                       tgCCGGATGCGGCGTGAACGCCTTATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCa                                             >  1:1184904/2‑100 (MQ=21)
                                                       ggCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCa                                             >  1:44465/1‑100 (MQ=255)
                                                        ggcgtaTAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATTCGACGCTTGATGCGTCTTATCAGGCCTACATGTGCACCGTATCCgg                                               <  1:2775486/92‑1 (MQ=25)
                                                        gCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaa                                            >  1:318914/1‑100 (MQ=255)
                                                        gCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaa                                            >  1:2120907/1‑100 (MQ=255)
                                                        gCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaa                                            >  1:282546/1‑100 (MQ=255)
                                                        gCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaa                                            <  2:11809/100‑1 (MQ=255)
                                                        gCCGGATAAGGCGGTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACTGTATCCTGCa                                             >  2:2215547/1‑99 (MQ=255)
                                                         ccGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGATGCACCGTATCCGGCaaa                                           >  1:3414088/1‑100 (MQ=255)
                                                          cGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAAc                                          <  1:2954100/100‑1 (MQ=255)
                                                           ggATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCaaa                                           <  2:1883604/98‑1 (MQ=255)
                                                           ggATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAAcc                                         <  2:2379910/100‑1 (MQ=255)
                                                            gATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtg                                        <  2:2000344‑M2/100‑29 (MQ=255)
                                                              tAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCGAACCATa                                      >  1:1742925/1‑100 (MQ=255)
                                                               aaGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATAc                                     <  2:643541/100‑1 (MQ=255)
                                                                aGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACt                                    <  2:2653406/100‑1 (MQ=255)
                                                                aGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACt                                    <  2:2138112/100‑1 (MQ=255)
                                                                aGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACt                                    >  2:2116370/1‑100 (MQ=255)
                                                                 ggCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTc                                   >  1:523211/1‑100 (MQ=255)
                                                                 ggCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTc                                   >  2:1642295/1‑100 (MQ=255)
                                                                 ggCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTc                                   >  2:3076309/1‑100 (MQ=255)
                                                                 ggCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTc                                   <  2:1261082/100‑1 (MQ=255)
                                                                 ggCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTc                                   >  1:880017/1‑100 (MQ=255)
                                                                  gCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTca                                  <  1:564579/100‑1 (MQ=255)
                                                                   cgatctcgccgcATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcac                                 <  1:1251675/94‑1 (MQ=255)
                                                                   cGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcac                                 <  2:1566376/100‑1 (MQ=255)
                                                                    gTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcaca                                <  1:557409/100‑1 (MQ=255)
                                                                    gTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcaca                                >  2:2180676/1‑100 (MQ=255)
                                                                    gTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcaca                                <  2:3257938/100‑1 (MQ=255)
                                                                      tCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATc                              >  1:1295834/1‑100 (MQ=255)
                                                                      tCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATc                              <  1:1049122/100‑1 (MQ=255)
                                                                       cACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATca                             >  2:2482195/1‑100 (MQ=255)
                                                                        aCGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGCCGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATcaa                            <  1:758747/100‑1 (MQ=255)
                                                                         cgccgcATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTcacagatcg                           >  2:1251679/1‑95 (MQ=255)
                                                                                 ccGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGaaaa                   >  1:2627447/1‑100 (MQ=255)
                                                                                  cGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAAt                  >  2:3415708/1‑100 (MQ=255)
                                                                                      aTTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTAcc              >  2:96608/1‑100 (MQ=255)
                                                                                       tttGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTAc               <  1:383054/98‑1 (MQ=255)
                                                                                        ttGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCt            <  1:3110502/100‑1 (MQ=255)
                                                                                         tGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCtt           >  1:283959/1‑100 (MQ=255)
                                                                                         tGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCtt           >  1:2703308/1‑100 (MQ=255)
                                                                                            gCATAGTGCCTGATGCGACGCTTGATGCGTGTTGTCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcgtactatacct        <  1:2253603‑M2/100‑61 (MQ=255)
                                                                                            gCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGt        <  2:1434919/100‑1 (MQ=255)
                                                                                             cATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcatactatatctg       <  1:653505‑M2/100‑62 (MQ=255)
                                                                                             cATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcatactatatctg       <  2:20368‑M2/100‑62 (MQ=255)
                                                                                                aGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcatactatatctggct    <  1:1795878‑M2/100‑65 (MQ=255)
                                                                                                 gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcatactatatctggcta   <  1:432783‑M2/100‑66 (MQ=255)
                                                                                                 gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCactatgctcaaatgccggatgcggcgtgaacgccttatccggcctacgcatactatatctggcta   <  1:3375200‑M2/100‑66 (MQ=255)
                                                                                                 gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTcc   <  2:282548/100‑1 (MQ=255)
                                                                                                 gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTcc   >  1:1725653/1‑100 (MQ=255)
                                                                                                 gTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTcc   <  2:283457/100‑1 (MQ=255)
                                                                                                  tGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCg  <  1:2692769/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
CGAAGAAGGCGGAAGCCGCGCAGTAATTCGGCCTTAGCCAGATATAGTATGCGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCATTTGAGCATAGTGCCTGATGCGACGCTTGATGCGTCTTATCAGGCCTACAGGTGCACCGTATCCGGCAAACCATACTCACATCAACAACGAAAATTACCCTTCGTTCTCCG  >  NC_000913/4457133‑4457330

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.