New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 463832998 (0.790)6 (0.050) 5/168 NT 5.8% coding (152/1353 nt) creD inner membrane protein
?NC_000913 = 4638348 104 (0.890)coding (171/1353 nt) creD inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 133 total aligned reads displayed.

TGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAT  >  NC_000913/4638230‑4638428
                                                                                                   |                                                                                                   
tGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGG                                                                                                     <  2:2165805‑M1/100‑1 (MQ=255)
 gCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCggg                                                                                                    >  1:2120328/1‑100 (MQ=255)
  cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGc                                                                                                   >  2:3406594/1‑100 (MQ=255)
  cTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGc                                                                                                   <  2:849663/100‑1 (MQ=255)
    gttgttGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCg                                                                                                 >  1:3345669/1‑100 (MQ=255)
     ttgttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCg                                                                                                 <  1:3001439/99‑1 (MQ=255)
       gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCg                                                                                                 >  1:535099/1‑97 (MQ=255)
       gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaa                                                                                              >  2:2994243/1‑100 (MQ=255)
       gttgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaa                                                                                              >  1:2452186/1‑100 (MQ=255)
         tgtttCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaa                                                                                            <  1:3620/97‑1 (MQ=255)
         tgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaa                                                                                            <  1:173212/100‑1 (MQ=255)
         tgATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCaaaa                                                                                            >  2:2379562/1‑100 (MQ=255)
            ttCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACt                                                                                         >  1:1068079/1‑100 (MQ=255)
              ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCCAAAACt                                                                                         >  1:3102093/1‑98 (MQ=255)
              ccGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCg                                                                                       >  2:1972783/1‑100 (MQ=255)
                gATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGtt                                                                                     <  2:3102111/100‑1 (MQ=255)
                   aaTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTggg                                                                                  <  2:2972855/100‑1 (MQ=255)
                   aaTGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTgg                                                                                   <  1:74212/99‑1 (MQ=255)
                     tGCTGATTCGGCAGGTGATTGTAGAACGTACTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCCAGGTACCAGCGGGCCGCAAAAAAACGTTGGGc                                                                                 <  1:1176489‑M2/99‑2 (MQ=255)
                      gttgaTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGAGATGTGTAAGATGTGATTTGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTTGGccg                                                                               <  1:1336196‑M2/98‑4 (MQ=255)
                       cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                              >  2:3319244‑M2/1‑96 (MQ=255)
                       cTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgc                                                                              <  2:1072067‑M2/100‑5 (MQ=255)
                        tGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgct                                                                             <  1:1869244‑M1/100‑25 (MQ=255)
                         gATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctg                                                                            <  1:18522‑M1/100‑26 (MQ=255)
                          aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctgg                                                                           <  1:603302‑M1/100‑27 (MQ=255)
                          aTTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCa                                                                           <  2:2188809/100‑1 (MQ=255)
                           ttCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctggt                                                                          <  1:589477‑M1/100‑28 (MQ=255)
                           ttCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctggn                                                                          <  1:32069‑M1/100‑28 (MQ=255)
                            tCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATc                                                                         <  2:1507625/100‑1 (MQ=255)
                             cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                        <  2:2353772/100‑1 (MQ=255)
                             cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                        <  1:2646619/100‑1 (MQ=255)
                             cGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCg                                                                        >  2:149987/1‑100 (MQ=255)
                              ggCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGc                                                                       <  1:1519899/100‑1 (MQ=255)
                               gCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCt                                                                      <  2:1785187/100‑1 (MQ=255)
                                  ggTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGcccaacgagtttttgcggcccgctggtactttgg                                                                   <  1:910538‑M1/100‑35 (MQ=255)
                                  ggTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTAtt                                                                   >  1:1738045/1‑100 (MQ=255)
                                    tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                 <  2:3228800/100‑1 (MQ=255)
                                    tGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTcc                                                                 >  1:2423597/1‑100 (MQ=255)
                                        tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                             <  1:1021406/100‑1 (MQ=255)
                                        tGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgtg                                                             <  2:494321/100‑1 (MQ=255)
                                         gTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCtg                                                               <  1:231026/97‑1 (MQ=255)
                                           cGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGAcc                                                          <  2:383983/100‑1 (MQ=255)
                                            gAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCg                                                         >  2:262226/1‑100 (MQ=255)
                                            gAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCg                                                         >  1:1453374/1‑100 (MQ=255)
                                              aCGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACAAAAAAAAAAAAAAAACTCGTTGGGCCGCTCATCGCTATTCCtgt                                                              <  1:2691624/93‑1 (MQ=255)
                                               cGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGc                                                      >  2:744767/1‑100 (MQ=255)
                                                gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                     <  2:578601/100‑1 (MQ=255)
                                                gTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCt                                                     >  1:512812/1‑100 (MQ=255)
                                                 tGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCtt                                                    >  2:3156866/1‑100 (MQ=255)
                                                   cttaatACCGAAGCGATGTGGAAGCGGGTCTTCGCCAAATGACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                  <  1:2811484/95‑1 (MQ=255)
                                                   cTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTta                                                  >  2:2118540/1‑100 (MQ=255)
                                                     gATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTtata                                                >  1:2863588/1‑100 (MQ=255)
                                                      aTTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATAc                                               <  1:447004/100‑1 (MQ=255)
                                                       ttACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACg                                              >  2:903400/1‑100 (MQ=255)
                                                        tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                             <  2:3209969/100‑1 (MQ=255)
                                                        tACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACgg                                             <  1:1372059/100‑1 (MQ=255)
                                                         aCCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGt                                            >  2:1225628/1‑100 (MQ=255)
                                                          ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                           <  1:1730404/100‑1 (MQ=255)
                                                          ccGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTg                                           <  1:1697067/100‑1 (MQ=255)
                                                            gTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCa                                         <  2:3222946/100‑1 (MQ=255)
                                                              aGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGa                                      <  2:733347/100‑1 (MQ=255)
                                                              aGCGATGTGGAAGATGCAATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAgg                                       <  1:2636845/100‑1 (MQ=255)
                                                                 gATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAag                                    >  1:3307525/1‑100 (MQ=255)
                                                                   tgtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAagag                                  <  2:458604/100‑1 (MQ=255)
                                                                    gtgGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAgg                                 <  2:1269111/100‑1 (MQ=255)
                                                                      ggACGATGCGGTTCGGGAGAGTACCAGCGGGCCGCAAAAACGCGTTGGGCAGCTCATCGCTGTTCCGGGGACCGAGCTTGATACAGTGCAGGAaggg                                  >  1:2988435/1‑95 (MQ=255)
                                                                      ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                               >  1:1912240/1‑100 (MQ=255)
                                                                      ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                               <  2:2732857/100‑1 (MQ=255)
                                                                      ggAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGAt                               >  1:2826757/1‑100 (MQ=255)
                                                                       gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                              >  2:739814/1‑100 (MQ=255)
                                                                       gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                              >  2:2876238/1‑100 (MQ=255)
                                                                       gAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATa                              >  2:1588230/1‑100 (MQ=255)
                                                                           aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATaaatc                          <  2:2307505/100‑3 (MQ=255)
                                                                           aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                          <  1:2994227/100‑1 (MQ=255)
                                                                           aTGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCGGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAAc                          >  1:754702/1‑100 (MQ=255)
                                                                              cGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGt                       >  1:1397476/1‑100 (MQ=255)
                                                                                 ttCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGa                    >  2:1899505/1‑100 (MQ=255)
                                                                                   cGCCAAAGTACCAGCGGGCCGCCAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGgcgc                  >  1:998961/1‑100 (MQ=255)
                                                                                    gCCAAAGTACCAGCGGGCCGCAAAAACTCGTTTGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCg                 <  1:1681395/100‑1 (MQ=255)
                                                                                     ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacc                <  1:910538‑M2/100‑67 (MQ=255)
                                                                                     ccAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCgg                <  1:1875807/100‑1 (MQ=255)
                                                                                      cAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGa               >  1:83518/1‑100 (MQ=255)
                                                                                        aaGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGaaa             <  2:512814/100‑1 (MQ=255)
                                                                                        aaGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGaaa             >  2:1477419/1‑100 (MQ=255)
                                                                                          gTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACg           >  2:2420301/1‑100 (MQ=255)
                                                                                           tACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGa          >  1:1615669/1‑100 (MQ=255)
                                                                                            nccaGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaa         <  1:32069‑M2/99‑74 (MQ=255)
                                                                                            aCCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGaa         <  2:1580959/100‑1 (MQ=255)
                                                                                             ccAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaat        <  1:603302‑M2/100‑75 (MQ=255)
                                                                                             ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg        <  2:477640/100‑1 (MQ=255)
                                                                                             ccAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAg        <  2:1738053/100‑1 (MQ=255)
                                                                                              cAGCGGGCCGCAAAAACTCGTTGGGccgctggtactttggcgaatcgcatcttccacatcgctacggtaatcagcacgttcgacaatcacctgccgaatc       <  1:18522‑M2/100‑76 (MQ=255)
                                                                                              cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt       <  1:3406570/100‑1 (MQ=255)
                                                                                              cAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGt       >  1:618712/1‑100 (MQ=255)
                                                                                               aGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGtt      >  2:3067338/1‑100 (MQ=255)
                                                                                                gCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGttt     <  2:3345693/100‑1 (MQ=255)
                                                                                                 cGGccaaacgagtttttgcggcccgctggtactttggcaaatcacatcttacacatctctacggtaatcagcacgttcgacaatcacctgccgaatcaac    <  1:1336196‑M1/100‑98 (MQ=255)
                                                                                                  gggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTa   <  1:3311935/100‑1 (MQ=255)
                                                                                                   ggCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAt  >  2:945626/1‑100 (MQ=255)
                                                                                                   gcccaacgtttttttgcggcccgctggtacctgggcgaatcgcatcttccacatcgctacggtaatcagtacgttctacaatcacctgccgaatcagca   <  1:1176489‑M1/99‑99 (MQ=255)
                                                                                                   |                                                                                                   
TGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGATTGTCGAACGTGCTGATTACCGTAGCGATGTGGAAGATGCGATTCGCCAAAGTACCAGCGGGCCGCAAAAACTCGTTGGGCCGCTCATCGCTATTCCTGTGACCGAGCTTTATACGGTGCAGGAAGAGGATAAAACCGTGGAGCGGAAACGAAGTTTTAT  >  NC_000913/4638230‑4638428

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.