New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 361916NA (NA)8 (0.070) 4/164 NT NA noncoding (34/34 nt) REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences REP30 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 1944249 = NA (NA)noncoding (31/127 nt) REP138 (repetitive extragenic palindromic) element; contains 3 REP sequences REP138 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 191 total aligned reads displayed.

AATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGC  >  NC_000913/361817‑362015
                                                                                                   |                                                                                                   
    gCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattg                                                                                                 >  2:1109417/1‑100 (MQ=255)
    gCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattg                                                                                                 >  2:10114/1‑100 (MQ=255)
        gCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACattgattg                                                                                             <  2:2522348/100‑1 (MQ=255)
         ccTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGc                                                                                            >  2:347663/1‑100 (MQ=255)
          cTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCt                                                                                           <  1:388348/100‑1 (MQ=255)
           tGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGTCGCTCGCGCCGCATCCGACATTGATTGCtt                                                                                          <  2:810591/100‑1 (MQ=255)
            gCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTa                                                                                         <  1:2216920/100‑1 (MQ=255)
            gCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTa                                                                                         >  2:671755/1‑100 (MQ=255)
             ctctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTaa                                                                                        >  1:1084819/1‑100 (MQ=255)
              tctTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAg                                                                                       >  1:519820/1‑100 (MQ=255)
                ttATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAgag                                                                                     >  1:892150/1‑98 (MQ=255)
                ttATTCTTTCGGTCATTGGCATGTTCAAGGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCg                                                                                     <  1:3291170/100‑1 (MQ=255)
                   ttCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACt                                                                                  >  2:1365469/1‑100 (MQ=255)
                    tCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACtt                                                                                 <  2:1720926/100‑1 (MQ=255)
                     cTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttc                                                                                >  1:1170445/1‑100 (MQ=255)
                        tCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGTGCTCGCGCCGCATCCGACATTGATTGCTCAAGCGACttcatt                                                                             <  2:2309670/100‑1 (MQ=255)
                         cGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattc                                                                            >  2:8867/1‑100 (MQ=255)
                          ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattca                                                                           >  2:1712622/1‑100 (MQ=255)
                          ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattca                                                                           <  2:3332692/100‑1 (MQ=255)
                          ggTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACttcattca                                                                           <  2:2878562/100‑1 (MQ=255)
                            tCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCAcc                                                                         <  2:1084822/100‑1 (MQ=255)
                                   cATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTgacgac                                                                  >  1:2641537/1‑100 (MQ=255)
                                    aTGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGacgacg                                                                 <  1:135611/100‑1 (MQ=255)
                                    aTGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGacgacg                                                                 <  1:3205912/100‑1 (MQ=255)
                                     tGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgc                                                                >  1:197139/1‑100 (MQ=255)
                                      gTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgca                                                               >  1:714577/1‑100 (MQ=255)
                                        tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                             <  1:79909/100‑1 (MQ=255)
                                        tCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACgcagc                                                             <  2:1528935/100‑1 (MQ=255)
                                            tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                         <  2:1204873/100‑1 (MQ=255)
                                            tGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAggg                                                         >  2:2221843/1‑100 (MQ=255)
                                              cGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaa                                                       >  2:2593078/1‑100 (MQ=255)
                                               gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCCTTCACCTGACGACGCAGCAGGGaa                                                       >  1:1200290/1‑99 (MQ=255)
                                               gATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGaaa                                                      >  2:728385/1‑100 (MQ=255)
                                                aTCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAg                                                     >  2:857683/1‑100 (MQ=255)
                                                 tCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGc                                                    <  2:492028/100‑1 (MQ=255)
                                                   aCTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgg                                                  <  1:659531/100‑1 (MQ=255)
                                                    cTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCggg                                                 <  2:3146651/100‑1 (MQ=255)
                                                     tCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggc                                                <  1:2875420/100‑1 (MQ=255)
                                                            tGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGAGTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                         <  2:3080057/100‑1 (MQ=255)
                                                            gatcttGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggcc                                         <  1:908871/95‑1 (MQ=255)
                                                              caatcaatgTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCgggccggggccg                                        >  1:482098/9‑99 (MQ=21)
                                                               tatGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCt                                      >  2:635009/1‑100 (MQ=255)
                                                                 tGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTaa                                    >  1:1446064/1‑100 (MQ=255)
                                                                  gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAg                                   >  2:2606503/1‑100 (MQ=255)
                                                                  gTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttc                                   <  1:1038614/100‑4 (MQ=38)
                                                                    tGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 >  2:991017/1‑100 (MQ=255)
                                                                    atgTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGc                                  >  2:3355661/3‑99 (MQ=37)
                                                                    atgTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCg                                 >  1:534118/3‑100 (MQ=37)
                                                                    atgTCGGATGCGGCGCGAGCGCCTTATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGACCGCTCAGCg                                 >  1:1698534/3‑100 (MQ=25)
                                                                      gTCGGATAAGGCGCTCGCGCCGCATCCGACctacggttcggtatctctggtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgcc                               >  1:1814004‑M1/1‑30 (MQ=255)
                                                                      gTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                               <  2:2761522/100‑1 (MQ=255)
                                                                      gTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                               >  2:1047987/1‑100 (MQ=255)
                                                                      gTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTg                               <  2:1852431/100‑1 (MQ=255)
                                                                      gTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGCCCCGGCCCGCtttccct                                <  2:3250301/99‑7 (MQ=38)
                                                                       tCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                              <  2:3216712/100‑1 (MQ=255)
                                                                        cGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGaa                             >  1:1284776/1‑100 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCTTATCCGACctacggttcggtatctctgtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccggat                            >  1:539667‑M1/1‑27 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCGCATCCGACctacggttcggtatctctggtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccgga                            >  1:310680‑M1/1‑27 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                            <  2:1157008/100‑1 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                            >  2:2547671/1‑100 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAac                            <  2:459465/100‑1 (MQ=255)
                                                                         ggATAAGGCGCTCGCGCCGCATCCGACATGGAATGCTTAAGCGACTTCATTCAACTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGa                              <  1:1610332/98‑1 (MQ=255)
                                                                          gATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAaca                           <  1:2451519/100‑1 (MQ=255)
                                                                           aTAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAacac                          <  2:1391861/100‑1 (MQ=255)
                                                                            tAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                         <  2:16689/100‑1 (MQ=255)
                                                                            tAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACg                         <  1:2518168/100‑1 (MQ=255)
                                                                              aGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGa                       >  1:1489746/1‑100 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTCAGCGTGAACACGGaa                      >  2:3362701/1‑100 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                      >  2:1575565/1‑100 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                      <  2:974460/100‑1 (MQ=255)
                                                                               ggCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                      >  2:3000279/1‑100 (MQ=255)
                                                                                gcgcTCGCGCCGCATCCGACATTGATTGCTTAAGCTACTTCATTCACCTGTCGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGaa                      <  2:1560466/99‑1 (MQ=255)
                                                                                 cgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAt                    >  2:2074127/1‑100 (MQ=255)
                                                                                 cgcTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAAt                    >  2:944228/1‑100 (MQ=255)
                                                                                    gagcgccttaTCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTaa                 <  2:1247071/91‑1 (MQ=255)
                                                                                     cgcgCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAg                >  1:2114715/1‑100 (MQ=255)
                                                                                       cgccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGt              <  1:1109414/100‑1 (MQ=255)
                                                                                        gccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGNAGGGAAAGCGGGNCGGGGCCGCTAAGCGTNAACACGGAAATTAAgg               <  1:2721012/98‑1 (MQ=255)
                                                                                         ccgcATCCGACATTGATTGCTTAAGCTACTTCATCCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACCGAAATTAAGGTg             <  1:2291748/99‑1 (MQ=255)
                                                                                         ccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGa            <  1:991015/100‑1 (MQ=255)
                                                                                         ccgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGa            <  1:1712614/100‑1 (MQ=255)
                                                                                          cgcATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGaa           <  2:901488/100‑1 (MQ=255)
                                                                                            cATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGATCACGGAAATTAAGGTGAAGc         <  1:2092019/100‑1 (MQ=255)
                                                                                            cATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGc         <  1:3313422/100‑1 (MQ=255)
                                                                                            cATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGc         <  2:2806067/100‑1 (MQ=255)
                                                                                             aTCCGACctacggttcggtatctctggtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccggatgcggcgcgagcgaccaatc        >  2:2726652‑M1/1‑7 (MQ=255)
                                                                                             aTCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAGAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGcc        >  1:2997318/1‑100 (MQ=255)
                                                                                             aTCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGACGGGGCCGCTAAGCGTGAACACGGAAATGAAGGGGa            >  1:2840364/1‑96 (MQ=255)
                                                                                              tCCGACctacggttcggtatctctggtagtccgggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccggatgcggcgcgagcgaccaatcc       >  2:2404‑M1/1‑6 (MQ=255)
                                                                                              tCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGccc       <  2:2488447/100‑1 (MQ=255)
                                                                                               ccGACctacggttcggtatctctggtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccggatgcggcgcgagcgaccaatccg      >  2:1772232‑M1/1‑5 (MQ=255)
                                                                                               ccGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCa      >  2:1471979/1‑100 (MQ=255)
                                                                                                cGACctacggttcggtatctctggtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccggatgcggcgcgagcgaccaatccga     >  2:2271930‑M1/1‑4 (MQ=255)
                                                                                                cGACctacggttcggtatctctggtagtcctggtaagacgcgaacagcgtcgcatcaggcatattgccagtgccggatgcggcgcgagcgaccaatccg      >  1:2152311‑M1/1‑4 (MQ=255)
                                                                                                cGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAg     >  1:276625/1‑100 (MQ=255)
                                                                                                cGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAg     >  1:601554/1‑100 (MQ=255)
                                                                                                cGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAg     <  2:1306371/100‑1 (MQ=255)
                                                                                                 gACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgc    <  2:2395333/100‑1 (MQ=255)
                                                                                                  aCATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGTCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcg   <  2:451091/100‑1 (MQ=255)
                                                                                                   cATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAgcgc  >  2:784756/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AATAGCTTGCCTGCTCTTATTCTTTCGGTCATTGGCATGTTCAATGCGATCACTCCGTTATGATATGTTGGTCGGATAAGGCGCTCGCGCCGCATCCGACATTGATTGCTTAAGCGACTTCATTCACCTGACGACGCAGCAGGGAAAGCGGGCCGGGGCCGCTAAGCGTGAACACGGAAATTAAGGTGAAGCCCAGCGC  >  NC_000913/361817‑362015

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.