BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	731060 =	NA (NA)	3 (0.030)	3/166	NT	NA	coding (1478/4194 nt)	rhsC	Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor
*	?	NC_000913	731092 =	NA (NA)	3 (0.030)	3/166	NT	NA	coding (1510/4194 nt)	rhsC	Rhs protein with putative toxin domain; putative neighboring cell growth inhibitor

Only 100 of 119 total aligned reads displayed.

ATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCC  >  NC_000913/730961‑731154

aTGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATgggg                                                                                                <  2:1643028/100‑1 (MQ=255)

 tGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGc                                                                                               <  2:705264/100‑1 (MQ=255)

 tGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGc                                                                                               >  2:1961047/1‑100 (MQ=255)

 tGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGc                                                                                               <  2:3172013/100‑1 (MQ=255)

 tGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGc                                                                                               <  2:252849/100‑1 (MQ=255)

   gCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCg                                                                                             <  2:687818/100‑1 (MQ=255)

   gCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCg                                                                                             <  2:290535/100‑1 (MQ=255)

   gCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCg                                                                                             >  2:2468375/1‑100 (MQ=255)

    cAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGt                                                                                            >  2:2987676/1‑100 (MQ=255)

    cAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGt                                                                                            >  2:3170636/1‑100 (MQ=255)

      gggCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGATGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGCCt                                                                                          >  2:707465/1‑100 (MQ=255)

       ggCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTg                                                                                         >  1:3341255/1‑100 (MQ=255)

           tCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGATATACGCCGGGAATATGATGAATGGGGCCGTCTGATTc                                                                                     >  1:2308708/1‑100 (MQ=255)

            cGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCa                                                                                    <  1:212802/100‑1 (MQ=255)

             ggCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAg                                                                                   <  2:1607281/100‑1 (MQ=255)

             ggCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAg                                                                                   <  2:2577983/100‑1 (MQ=255)

              gCGTTTTACTATCACCACCCAAGCCAGCTACCGCCAGCCACAGGGGCTGTCGGGCTGGAAATACGCCGAGAATATGATGAATGGGGTCGGCTGAtttatg                                                                                  <  1:1990631/100‑5 (MQ=255)

                gTTTTACTAGAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGaa                                                                                <  2:377188/100‑1 (MQ=255)

                   ttACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACt                                                                             >  1:95643/1‑100 (MQ=255)

                    tACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTg                                                                            >  2:1827882/1‑100 (MQ=255)

                     aacataACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGAGCTGGAAATACGACGGGAATATGATGAATGGGGCCGTCTGATTCAGGaaa                                                                               <  1:1836912/93‑1 (MQ=255)

                      cTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcc                                                                          >  2:2247837/1‑100 (MQ=255)

                        ataACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc                                                                        <  2:2471873/100‑1 (MQ=255)

                        ataACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc                                                                        >  1:1104600/1‑100 (MQ=255)

                        ataACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc                                                                        <  2:1734858/100‑1 (MQ=255)

                        ataACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc                                                                        <  1:214824/100‑1 (MQ=255)

                         tatccaccaTAGCCATTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGcccc                                                                        <  2:477344/96‑1 (MQ=255)

                         taACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCt                                                                       <  1:2594797/100‑1 (MQ=255)

                          aaCCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACCGCCCCTg                                                                      <  2:1801069/100‑1 (MQ=255)

                           accaccACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGa                                                                     >  2:1463781/1‑100 (MQ=255)

                              accacAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACgg                                                                  <  1:3266090/100‑1 (MQ=255)

                               ccacAGCCAGTTAACGTCAGTCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGc                                                                 <  2:703708/100‑1 (MQ=255)

                                cacaGCCAGTTAAGGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCg                                                                >  2:2299407/1‑100 (MQ=255)

                                cacaGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCg                                                                >  2:584056/1‑100 (MQ=255)

                                cacaGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCg                                                                >  1:1881171/1‑100 (MQ=255)

                                 acaGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGa                                                               >  2:1121686/1‑100 (MQ=255)

                                    gCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGatat                                                            >  1:3375239/1‑100 (MQ=255)

                                    gCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGatat                                                            <  2:2245763/100‑1 (MQ=255)

                                      cAGTTAACGTCAGCCACCGGACCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCa                                                          <  2:1715935/100‑1 (MQ=255)

                                       aGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAc                                                         <  2:3392222/100‑1 (MQ=255)

                                       aGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAc                                                         >  1:2175620/1‑100 (MQ=255)

                                        gTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCAcc                                                        <  2:3117065/100‑1 (MQ=255)

                                           aaCGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGc                                                     <  1:2734196/100‑1 (MQ=40)

                                             cGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTa                                                   >  2:3369390/1‑100 (MQ=255)

                                              gTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTAc                                                  >  2:2172569/1‑100 (MQ=255)

                                                cAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCCCCCGCTACCg                                                >  2:1659535/1‑100 (MQ=255)

                                                  gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                              >  1:2645983/1‑100 (MQ=255)

                                                  gCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGtt                                              >  2:3111059/1‑100 (MQ=255)

                                                   ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa                                             <  2:3375263/100‑1 (MQ=255)

                                                   ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa                                             <  2:476994/100‑1 (MQ=255)

                                                   ccACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTa                                             <  1:2933693/100‑1 (MQ=40)

                                                     aCCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATg                                           <  2:2845730/100‑1 (MQ=40)

                                                      ccGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGa                                          <  2:958076/100‑1 (MQ=255)

                                                       cGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGAt                                         >  1:1868087/1‑100 (MQ=255)

                                                       cGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGAt                                         <  2:2555826/100‑1 (MQ=255)

                                                       cGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGAt                                         <  2:1028057/100‑1 (MQ=255)

                                                        gggacggACGGGCTGGAAATACGACGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGAt                                         <  1:1525367/93‑1 (MQ=255)

                                                         ggCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATaa                                       >  2:2939888/1‑100 (MQ=255)

                                                           ccTGACGGGCTGGAAATACTCCGTGAATATCATGAATGGGCCCGTCTGATTCAGGAAACTGCCCCTGCCGGCGATATCACCCGCTACCGTTATGATaagc                                     <  1:1013644/100‑3 (MQ=14)

                                                           ccTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATc                                     >  2:1926824/1‑100 (MQ=255)

                                                           ccTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATc                                     <  1:553267/100‑1 (MQ=255)

                                                            cTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATcc                                    <  2:933260/100‑1 (MQ=255)

                                                             tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCca                                   >  1:3032786/1‑100 (MQ=40)

                                                             tGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCca                                   >  2:873106/1‑100 (MQ=255)

                                                              gACGGGCTGGAAATACGCCGGGAATATGCTGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCcac                                  >  2:434090/1‑100 (MQ=255)

                                                                  ggCTGGAAATACGCCGGGAATATGATGAATGGGGTCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAg                              <  1:1805047/100‑1 (MQ=255)

                                                                  ggCTGGAAATACGCCGGGAATATGATGAATGGGGTCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAg                              <  1:1805098/100‑1 (MQ=255)

                                                                   gCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGt                             <  1:2350769/100‑1 (MQ=255)

                                                                   gCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGt                             >  2:432234/1‑100 (MQ=255)

                                                                   gCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGt                             >  1:2666728/1‑100 (MQ=255)

                                                                    cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                            <  1:1271577/100‑1 (MQ=255)

                                                                    cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                            >  2:953909/1‑100 (MQ=255)

                                                                    cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                            >  2:950805/1‑100 (MQ=255)

                                                                    cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                            >  1:2919135/1‑100 (MQ=255)

                                                                    cTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTg                            <  2:3063984/100‑1 (MQ=40)

                                                                     tGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAATCTGCCCCTGCCGGCGATATCACCCGCTACCGTTATGCTAATCCACACAGTGa                           <  1:2890939/100‑1 (MQ=255)

                                                                       gAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACt                         >  1:2199689/1‑100 (MQ=40)

                                                                          aTACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTa                       >  1:3420123/1‑99 (MQ=38)

                                                                          aTACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAc                      <  2:3220378/100‑1 (MQ=38)

                                                                           tACGACGGGAATATGATGAATGGGGGCGTCTGATTGAGGAAACTGCCCCTGACGGCGATATTACACGATAGGGTTATGATGATCCAGACAGTGGGTTAc                      >  1:2130439/1‑99 (MQ=11)

                                                                            aCGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAccc                    <  1:2247825/100‑1 (MQ=35)

                                                                            aCGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTAccc                    <  1:935015/100‑1 (MQ=35)

                                                                             cGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCt                   >  2:1669884/1‑100 (MQ=32)

                                                                              gCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTg                  <  1:2548257/100‑1 (MQ=32)

                                                                               ccGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTgc                 >  2:2128425/1‑100 (MQ=33)

                                                                                  ggAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCa              <  2:2953506/100‑1 (MQ=33)

                                                                                     atatGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACg           <  2:3419086/100‑1 (MQ=33)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTTCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa        <  1:1533763/100‑1 (MQ=18)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATCATCCACACAGTGACTTACCCTGAGCAACGaaa        >  1:3024268/1‑100 (MQ=255)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa        >  2:1735320/1‑100 (MQ=33)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa        <  2:2258614/100‑1 (MQ=33)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa        >  2:276405/1‑100 (MQ=33)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa        >  2:2579584/1‑100 (MQ=33)

                                                                                        tgatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGaa        >  2:1363267/1‑100 (MQ=33)

                                                                                         gatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAg       >  1:3155840/1‑100 (MQ=32)

                                                                                         gatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAg       <  2:1881180/100‑1 (MQ=33)

                                                                                         gatgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGAGCAACGGAAg       >  1:2236699/1‑100 (MQ=18)

                                                                                           tgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGAt     <  1:1489724/100‑1 (MQ=32)

                                                                                           tgaATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGAt     >  1:2484698/1‑100 (MQ=33)

                                                                                              aTGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGcc  >  2:652941/1‑100 (MQ=32)

ATGGCAGGGCATCGGCGTTTTACTATAACCACCACAGCCAGTTAACGTCAGCCACCGGGCCTGACGGGCTGGAAATACGCCGGGAATATGATGAATGGGGCCGTCTGATTCAGGAAACTGCCCCTGACGGCGATATCACCCGCTACCGTTATGATAATCCACACAGTGACTTACCCTGCGCAACGGAAGATGCC  >  NC_000913/730961‑731154

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.