| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 39151 = | NA (NA) | 12 (0.110) | 7/164 | NT | NA | noncoding (1/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences |
| ? | NC_000913 | 39181 = | NA (NA) | noncoding (31/82 nt) | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP4 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
Only 100 of 175 total aligned reads displayed.
TACCGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGG > NC_000913/39052‑39250 | acgctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagg > 2:2231607‑M1/100‑100 (MQ=255)acgctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagg > 2:1126487‑M1/100‑100 (MQ=255) cgctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagg < 1:1167094‑M1/1‑1 (MQ=255) cgctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGc > 2:2528729‑M1/99‑100 (MQ=255) ctgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCg < 2:1294727‑M1/4‑1 (MQ=255) tgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCgg > 2:408101‑M1/96‑100 (MQ=255) tgggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatggagGCCgg > 2:1794637‑M1/96‑100 (MQ=255) ggAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCgg > 1:401614/1‑100 (MQ=255) ggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGAt > 1:2066244‑M1/94‑100 (MQ=255) ggtcgtgcggtgctgaagcaataccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGAt < 1:2568456‑M1/7‑1 (MQ=255) gaagaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATg < 2:717330/100‑1 (MQ=255) gaagaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATg < 1:3059290/100‑1 (MQ=255) agaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcg > 2:861739/1‑100 (MQ=255) agaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcg > 1:2508125/1‑100 (MQ=255) gaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcgg < 1:1343504/100‑1 (MQ=255) gaCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcag < 2:2315980/100‑3 (MQ=255) aCAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcggc > 1:576310/1‑100 (MQ=255) cAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcggcg < 2:2387394/100‑1 (MQ=255) cAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATgcggcg > 1:1173373/1‑100 (MQ=255) cgcgCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTaa > 2:2618675/1‑100 (MQ=255) gcgcAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTaaa > 1:1048659/1‑100 (MQ=255) aaTCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCt < 2:204625/100‑1 (MQ=255) ccGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTa > 2:2463362/1‑100 (MQ=255) ggCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATc > 1:1017955/1‑100 (MQ=255) ccAACGGCCCGAATTTCGGCATGGGTGGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATcc < 1:1854950/99‑1 (MQ=255) ccAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCg < 2:1462875/100‑1 (MQ=255) cAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCgg < 1:1529833/100‑1 (MQ=255) cAACGGCCCGAATTGCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCgg < 1:2677059/100‑1 (MQ=255) ccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGc > 1:1154366‑M1/71‑100 (MQ=255) ccgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGc > 2:3205909‑M1/71‑100 (MQ=255) aaCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:401616/100‑1 (MQ=255) aaCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:2597604/100‑1 (MQ=255) aaCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:1504099/100‑1 (MQ=255) aaCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:673850/100‑1 (MQ=255) aaCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:1185145/100‑1 (MQ=255) cgctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGcc > 2:1903458‑M1/70‑100 (MQ=255) aCGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGcc < 2:47718/100‑1 (MQ=255) gctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCt > 1:1614546‑M1/69‑100 (MQ=255) gctaagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCt > 1:2588980‑M1/69‑100 (MQ=255) cGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGc < 2:2997165/98‑1 (MQ=255) ggCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCGGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTa < 1:2826510/100‑1 (MQ=255) taagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCTAc > 1:2841287‑M1/67‑100 (MQ=255) taagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCTAc > 1:475753‑M1/67‑100 (MQ=255) taagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGACGGATGCGGCGTAAACGCTTTATCCGGCCTAc > 2:3241171‑M1/67‑100 (MQ=255) aagtccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACa > 1:3036757‑M1/66‑100 (MQ=255) ccgtgcgctgcctgatgcgacgctgatgcgtcttatcaggcctacgggagcacgaatgtagGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTc > 2:1890583‑M1/62‑99 (MQ=255) tttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTg < 2:3304724/100‑1 (MQ=255) tttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTg < 1:1502847/100‑1 (MQ=255) ttCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGc < 2:2355104/100‑1 (MQ=255) ggCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTcc > 1:1090589/1‑100 (MQ=255) cATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCTGGCCTACATTCGTGCTCCCg > 2:1538324/1‑100 (MQ=255) cATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCg > 1:566024/1‑100 (MQ=255) cATGGGTAGATGATCCATTAATTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGTGTCAACGCTTTATCCGGCCTACATCCGTGCTCCCg > 1:1264696/1‑100 (MQ=38) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg < 1:826405/100‑1 (MQ=255) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg > 2:3164368/1‑100 (MQ=255) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg < 1:2274525/100‑1 (MQ=255) ggTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAgg < 2:620013/100‑1 (MQ=255) gTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGc > 1:3347578/1‑100 (MQ=255) tAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGcc < 2:207973/100‑1 (MQ=255) aGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCt > 2:939863/1‑100 (MQ=255) aGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCt > 2:3227987/1‑100 (MQ=255) gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTg > 1:3188934/1‑100 (MQ=255) gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTg > 2:2855451/1‑100 (MQ=255) gatgatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTg < 1:2815233/100‑1 (MQ=255) gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa > 2:3043971/1‑100 (MQ=255) gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa < 2:2196326/100‑1 (MQ=255) gatCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa < 1:732725/100‑1 (MQ=255) gatCCATTATTGGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATa > 1:2623481/1‑100 (MQ=255) ccATTATTTGCTCCTGCAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGa > 1:2033136/1‑100 (MQ=255) cATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc < 2:734923/100‑1 (MQ=255) attattTGCTCCGGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGAc < 2:2712606/99‑1 (MQ=255) tattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCa < 1:2975561/100‑1 (MQ=255) tattTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCa < 2:1709731/100‑1 (MQ=255) attTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCAt < 2:3188952/100‑1 (MQ=255) tttGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATc < 1:982775/100‑1 (MQ=255) gCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGc > 1:1761146/1‑100 (MQ=255) cTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCg > 2:1335210/1‑100 (MQ=255) cTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCCCCCGTAGGCCTGATAACACGCATCAGCg > 1:804236/1‑100 (MQ=255) tCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGt < 1:2028907/100‑1 (MQ=255) cTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCg < 2:3145339/100‑1 (MQ=255) gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCa > 1:1277297/1‑100 (MQ=255) gAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCa < 1:1323879/100‑1 (MQ=255) aaaaaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCAt > 1:1861092/1‑100 (MQ=255) aaTTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAg < 1:1373052/100‑1 (MQ=255) tttATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGc < 2:3397726/100‑1 (MQ=255) aTGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgc < 2:602005/100‑1 (MQ=255) tGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcg < 1:2877690/100‑1 (MQ=255) gTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAgcgc < 2:626950/100‑1 (MQ=255) gtccgtgcgcTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCAc < 1:215512/91‑1 (MQ=255) gcgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACg > 1:728768/1‑100 (MQ=255) cgcATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACgg > 2:2836137/1‑100 (MQ=255) tGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACtt > 2:1004703/1‑100 (MQ=255) gACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTa > 2:2628409/1‑100 (MQ=255) gACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTa < 2:566026/100‑1 (MQ=255) gACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTACCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCACCGCACGGCCt > 1:3272378/1‑98 (MQ=255) cTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGATGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc < 2:2413025/100‑1 (MQ=255) cTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc > 2:1132350/1‑100 (MQ=255) cTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGc > 1:174391/1‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg > 1:805646‑M1/1‑100 (MQ=255) GCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCgg < 2:1311780‑M1/100‑1 (MQ=255) | TACCGGAGAAGACAACGCGCAATCCGGCCAACGGCCCGAATTTCGGCATGGGTAGATGATCCATTATTTGCTCCTGAAAAATTTATGTAGCGCATGACTGCCGGATGCGGCGTAAACGCTTTATCCGGCCTACATTCGTGCTCCCGTAGGCCTGATAAGACGCATCAGCGTCGCATCAGGCAGCGCACGGACTTAGCGG > NC_000913/39052‑39250 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |