New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2252796 =NA (NA)12 (0.110) 7/164 NT NA noncoding (1/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2252829 = NA (NA)noncoding (34/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 176 total aligned reads displayed.

TAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACT  >  NC_000913/2252697‑2252895
                                                                                                   |                                                                                                   
accattgccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagg                                                                                                     <  1:1598095‑M1/1‑1 (MQ=255)
 aGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGc                                                                                                    >  1:1618019/1‑100 (MQ=255)
  gCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGcc                                                                                                   >  2:2719838/1‑100 (MQ=255)
  gCCTGCGCGGCAATTTCGCGCGCCAACGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGcc                                                                                                   >  1:2333045/1‑100 (MQ=255)
   ccTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCg                                                                                                  <  2:1096042/100‑1 (MQ=255)
     tgccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGa                                                                                                <  1:1961021‑M1/6‑1 (MQ=255)
      gccgggttctttattggtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGAt                                                                                               >  2:3167876‑M1/94‑100 (MQ=255)
        gcgGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGc                                                                                             >  1:698614/1‑100 (MQ=255)
         cgGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCg                                                                                            <  2:2032800/100‑1 (MQ=255)
          ggCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGa                                                                                           <  1:1761692/100‑1 (MQ=255)
           gCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGAc                                                                                          >  2:1505250/1‑100 (MQ=255)
           gCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGAc                                                                                          >  1:1197566/1‑100 (MQ=255)
            cAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACg                                                                                         >  1:298873/1‑100 (MQ=255)
                  cgcgcgCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAc                                                                                   <  2:557825/100‑1 (MQ=255)
                   gcgcgcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAcg                                                                                  <  2:3026028/100‑1 (MQ=255)
                   gcgcgcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAcg                                                                                  <  1:3008548/100‑1 (MQ=255)
                    cgcgcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAcgc                                                                                 >  1:3093119/1‑100 (MQ=255)
                     gcgcCAGCGGCAGCTTAAACAACCCTACCCTGTGTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAAcgcg                                                                                >  1:2259404/1‑100 (MQ=255)
                      gtttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGt                                                                               >  2:1700771‑M1/78‑100 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAGCGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGt                                                                               <  1:2950978/99‑1 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTATCAATGTTGCCGGATGCGCCGCTTAAcgcggc                                                                              <  2:2303179/100‑3 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTc                                                                              >  1:2578080/1‑100 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTc                                                                              >  2:2510518/1‑100 (MQ=255)
                       gcCAGCGGCAGCTTAAACAACCCTACCCTGACTACCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGATTAACGCGTc                                                                              >  1:2241284/1‑100 (MQ=255)
                        ttagcttgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATAAGACGCTTAACGCGTCt                                                                             >  1:1166034‑M1/76‑100 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             >  2:2811077/1‑100 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             >  1:2960703/1‑100 (MQ=255)
                        ccAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCt                                                                             >  1:155355/1‑100 (MQ=255)
                            cGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATc                                                                         <  2:634230/100‑1 (MQ=255)
                             ggCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATcc                                                                        <  2:2940054/100‑1 (MQ=255)
                              tgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCg                                                                       >  2:2226837‑M1/70‑100 (MQ=255)
                              tgagtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCg                                                                       >  2:1184532‑M1/70‑100 (MQ=255)
                              gCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCg                                                                       <  2:3037799/100‑1 (MQ=255)
                               cAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCgg                                                                      <  2:915113/100‑1 (MQ=255)
                               cAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCgg                                                                      <  1:2888350/100‑1 (MQ=255)
                                 gtgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    >  1:187305‑M1/67‑100 (MQ=255)
                                 gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    <  2:2523077/100‑1 (MQ=255)
                                 gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                    >  2:126553/1‑100 (MQ=255)
                                  cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                   >  1:3262012/1‑100 (MQ=255)
                                  cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                   >  1:1280657/1‑100 (MQ=255)
                                  cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                   >  1:1368497/1‑100 (MQ=255)
                                    tAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTAc                                                                 <  2:1908028/100‑1 (MQ=255)
                                    tAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTAc                                                                 >  2:790475/1‑100 (MQ=255)
                                     cattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACa                                                                >  2:399302‑M1/63‑100 (MQ=255)
                                      nttgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTAtccggccagatc                                                               <  1:1288556‑M1/39‑6 (MQ=255)
                                         aacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATc                                                            <  2:3337693/100‑1 (MQ=255)
                                          accctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCa                                                           <  2:2945065/100‑1 (MQ=255)
                                           ctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                          >  1:955669‑M1/57‑100 (MQ=255)
                                           ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                          <  2:1686950/100‑1 (MQ=255)
                                           ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                          >  2:2266820/1‑100 (MQ=255)
                                           ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                          <  2:361243/100‑1 (MQ=255)
                                           ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                          <  1:2312768/100‑1 (MQ=255)
                                            cctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgg                                                         <  2:2495402/100‑1 (MQ=255)
                                             ctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGc                                                        >  1:2337505/1‑100 (MQ=255)
                                             ctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGc                                                        <  2:1112995/100‑1 (MQ=255)
                                              taccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCa                                                       >  1:2017494/1‑100 (MQ=255)
                                                ccctGTCTGCAGATAACGCGCTTTCATCAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAt                                                     <  1:3196143/100‑1 (MQ=255)
                                                 cctGTCGGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAt                                                     <  2:1236902/99‑1 (MQ=255)
                                                   tGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTc                                                  >  2:1890550/1‑100 (MQ=255)
                                                     tCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAg                                                <  1:440014/100‑1 (MQ=255)
                                                      cTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGc                                               <  1:773790/100‑1 (MQ=255)
                                                         ccGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAg                                            <  2:2912854/100‑1 (MQ=255)
                                                          cGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCAGGCCTACAAATCAGGAAATTTCAGCAAGt                                           >  1:2719439/1‑100 (MQ=255)
                                                               aCGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATg                                      >  1:2158136/1‑100 (MQ=255)
                                                               aCGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATg                                      <  1:2455321/100‑1 (MQ=255)
                                                                cgcgCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGt                                     >  1:254270/1‑100 (MQ=255)
                                                                  cgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAg                                   <  1:1600821/100‑1 (MQ=255)
                                                                   gcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAgg                                  <  1:2756114/100‑1 (MQ=255)
                                                                   gcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAgg                                  <  1:547096/100‑1 (MQ=255)
                                                                    cTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGc                                 <  1:2501153/100‑1 (MQ=255)
                                                                     tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                <  1:1158167/100‑1 (MQ=255)
                                                                     tttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGcc                                <  2:1802783/100‑1 (MQ=255)
                                                                       tCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTg                              >  1:172820/1‑100 (MQ=255)
                                                                       tCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTg                              >  2:388356/1‑100 (MQ=255)
                                                                         aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                            >  1:387879/1‑100 (MQ=255)
                                                                         aTTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAt                            >  1:2932128/1‑100 (MQ=255)
                                                                          ttAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATa                           <  2:1728923/100‑1 (MQ=255)
                                                                            aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                         >  1:2461496/1‑100 (MQ=255)
                                                                             gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGc                        >  2:572997/1‑100 (MQ=255)
                                                                              tGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCt                       <  1:949276/100‑1 (MQ=255)
                                                                              tGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCt                       <  2:2698314/100‑1 (MQ=255)
                                                                              tGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCt                       <  2:2017505/100‑1 (MQ=255)
                                                                               gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                      >  2:1365888/1‑100 (MQ=255)
                                                                                ccAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTg                     <  1:1676928/100‑1 (MQ=255)
                                                                                 cAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgc                    >  2:2614284/1‑100 (MQ=255)
                                                                                 cAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgc                    >  1:449995/1‑100 (MQ=255)
                                                                                 cAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgc                    >  1:3304709/1‑100 (MQ=255)
                                                                                  aaTGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcg                   <  2:3189858/100‑1 (MQ=255)
                                                                                  aaTGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcg                   <  2:1531619/100‑1 (MQ=255)
                                                                                  aaTGGTGTAACAATGTTGCCGGATGCGACGCATAACGTGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgcg                   <  1:2301432/100‑1 (MQ=255)
                                                                                       tgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCa              >  2:1315093/1‑100 (MQ=255)
                                                                                       tgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCa              <  1:453249/100‑1 (MQ=255)
                                                                                        gtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg             <  1:509351/100‑1 (MQ=255)
                                                                                        gtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg             <  1:578860/100‑1 (MQ=255)
                                                                                          aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc           <  1:300915/100‑1 (MQ=255)
                                                                                           aCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCa          >  1:1006136/1‑100 (MQ=255)
                                                                                           aCAATGTTGCCGGATGCGACGCTTAACGCATCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCa          <  1:725647/100‑1 (MQ=255)
                                                                                              aTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATg       <  2:940676/100‑1 (MQ=255)
                                                                                                 ttGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGaca    <  1:2654109/100‑1 (MQ=255)
                                                                                                  tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac   >  2:568943/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TAGCCTGCGCGGCAATTTCGCGCGCCAGCGGCAGCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACT  >  NC_000913/2252697‑2252895

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.