New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2662541NA (NA)11 (0.100) 6/164 NT NA noncoding (233/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 = 2662574 NA (NA)noncoding (266/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 129 total aligned reads displayed.

TCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGG  >  NC_000913/2662442‑2662640
                                                                                                   |                                                                                                   
tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAg                                                                                                     <  2:202025/100‑1 (MQ=11)
 cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGg                                                                                                    >  2:799793‑M1/1‑99 (MQ=255)
 cACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGg                                                                                                    >  2:2500213‑M1/1‑99 (MQ=255)
  aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgc                                                                                                   <  2:1015015‑M1/100‑3 (MQ=255)
  aCTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgc                                                                                                   <  1:1377558‑M1/100‑3 (MQ=255)
   cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcc                                                                                                  <  2:284487‑M1/100‑4 (MQ=255)
   cTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCCGTTCACTGTAGgcc                                                                                                  <  1:1763900‑M1/100‑4 (MQ=255)
    tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcct                                                                                                 <  1:2168697‑M1/100‑5 (MQ=255)
    tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcct                                                                                                 <  1:3193304‑M1/100‑5 (MQ=255)
    tGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcct                                                                                                 >  2:1741868‑M1/1‑96 (MQ=255)
     gTAGGCCTGATGAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  1:2602390‑M1/100‑6 (MQ=255)
     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  2:203480‑M1/100‑6 (MQ=255)
     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  2:1775628‑M1/100‑6 (MQ=255)
     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  2:3392343‑M1/100‑6 (MQ=255)
     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctg                                                                                                <  1:2733915‑M1/100‑6 (MQ=255)
     gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcct                                                                                                 <  1:1030262‑M1/99‑5 (MQ=255)
        ggCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatg                                                                                             >  2:2532672‑M1/1‑92 (MQ=255)
        ggCCTGAGAAGACGCATTACGCGTCGCCTCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatn                                                                                             <  1:310214‑M1/100‑9 (MQ=255)
          ccTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgttagg                                                                                           >  1:943597‑M1/1‑90 (MQ=255)
                              gTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatca                                                                       <  2:2218431‑M1/100‑31 (MQ=255)
                                cGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcagg                                                                     <  1:1719682‑M1/100‑33 (MQ=255)
                                 gCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggc                                                                    <  2:2582195‑M1/100‑34 (MQ=255)
                                 gCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggc                                                                    <  1:79302‑M1/100‑34 (MQ=255)
                                  cATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggcc                                                                   <  2:1070026‑M1/100‑35 (MQ=255)
                                  cATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggcc                                                                   <  1:3149285‑M1/100‑35 (MQ=255)
                                  cATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggc                                                                    <  1:660644‑M1/99‑34 (MQ=255)
                                            cGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt                                                          <  1:957689/99‑1 (MQ=11)
                                            cGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGtt                                                          >  2:144422/1‑99 (MQ=11)
                                                tGTCGGATGCGGCGTGAACGCCTTATCCGACCTAGGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                     <  1:689662/100‑1 (MQ=25)
                                                tGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCg                                                     <  1:2082910/100‑1 (MQ=35)
                                                 gTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAtttg                                                     >  1:3268870/1‑97 (MQ=18)
                                                  tctgATGCCGCGTGAACGCCTTATCCCACCTTCGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg                                                    <  1:2819051/96‑1 (MQ=11)
                                                    ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGttggacg                                                     >  1:391712/1‑91 (MQ=1)
                                                    ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCgg                                                    <  1:1741860/97‑1 (MQ=38)
                                                    ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                 <  1:840281/100‑1 (MQ=40)
                                                    ggATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCt                                                 <  2:132775/100‑1 (MQ=40)
                                                     gATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgaacagaaccgta                                                <  2:1749506‑M1/100‑54 (MQ=255)
                                                       tGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGt                                              <  2:849003/100‑1 (MQ=255)
                                                        gcggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt                                             <  2:2805028/100‑1 (MQ=255)
                                                        gcggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGtt                                             >  1:1340150/1‑100 (MQ=255)
                                                         cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                            <  1:1207066/100‑1 (MQ=255)
                                                         cggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTa                                            >  1:1318032/1‑100 (MQ=255)
                                                          ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAc                                           >  2:2839601/1‑100 (MQ=255)
                                                          ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAc                                           >  1:1258012/1‑100 (MQ=255)
                                                          ggcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTCTAGGCCTGATAAGACGCATTACGCGTCGCATCATGCAACGGCTGGTGTTCGGGCTTg                                               >  1:2914161/1‑96 (MQ=11)
                                                           gcgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTAcc                                          <  2:3268890/100‑1 (MQ=255)
                                                            cgTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCt                                         >  2:2948980/1‑100 (MQ=255)
                                                             gTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCtt                                        <  2:2261311/100‑1 (MQ=255)
                                                              tGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCttt                                       >  2:785662/1‑100 (MQ=255)
                                                               gAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                                      >  1:1056314/1‑100 (MQ=255)
                                                               gAACGCCATATCCGACGTACGGTTCTGTACACTGTAGCCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTa                                      <  1:2976106/100‑1 (MQ=17)
                                                                aaCGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTAt                                     <  1:763938/100‑1 (MQ=255)
                                                                  agCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTc                                   >  1:1524863/2‑100 (MQ=255)
                                                                   gCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct                                  <  2:705393/100‑1 (MQ=255)
                                                                    ccatATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATACGGCCTTGTTACCTTTATTctg                                 >  1:319518/4‑100 (MQ=11)
                                                                    ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                 <  1:2822045/100‑1 (MQ=255)
                                                                    ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                 >  2:653724/1‑100 (MQ=255)
                                                                    ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctg                                 >  2:653704/1‑100 (MQ=255)
                                                                    ccTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTct                                  >  2:705366/1‑99 (MQ=255)
                                                                     cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                                >  2:747572/1‑100 (MQ=255)
                                                                     cTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                                <  2:1318038/100‑1 (MQ=255)
                                                                      ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                               <  1:362074/100‑1 (MQ=255)
                                                                      ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                               <  2:1258016/100‑1 (MQ=255)
                                                                      ttATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgc                                <  1:1627568/99‑1 (MQ=255)
                                                                       tATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTctgct                               >  1:2888096/1‑99 (MQ=255)
                                                                          ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTc                           <  2:1874373/100‑1 (MQ=255)
                                                                          ccGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCATCCGCGCTGGTTACCCCTATTctgctgtac                           >  1:2948452/1‑97 (MQ=11)
                                                                           cGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa                          >  2:3678/1‑100 (MQ=255)
                                                                           cGACCTACGGTTCTGTTCACTGTAGGCCGGATAAGACGCATTAAGCGGCGAATCGGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa                          >  1:3031500/1‑100 (MQ=21)
                                                                            gACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCa                          <  2:143519/99‑1 (MQ=255)
                                                                            gACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTAGTCGGCCTGGTTACCTTTTTTCTGCTGCTc                           >  1:2912838/1‑98 (MQ=255)
                                                                             aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt                        <  1:737139/100‑1 (MQ=255)
                                                                             aCCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAAt                        <  2:855994/100‑1 (MQ=255)
                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       >  2:3391510/1‑100 (MQ=255)
                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       <  2:316710/100‑1 (MQ=255)
                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       <  2:3239322/100‑1 (MQ=255)
                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       >  1:3307685/1‑100 (MQ=255)
                                                                              ccTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATa                       <  1:1611615/100‑1 (MQ=255)
                                                                                tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa                     >  2:932377/1‑100 (MQ=255)
                                                                                tACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGa                     >  1:2449603/1‑100 (MQ=255)
                                                                                  cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCTTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg                   <  1:144421/100‑1 (MQ=255)
                                                                                  cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg                   >  1:1465160/1‑100 (MQ=255)
                                                                                  cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg                   <  1:2151177/100‑1 (MQ=255)
                                                                                  cGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTAGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAg                   >  1:3286211/1‑100 (MQ=255)
                                                                                   ggTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGc                  >  2:1418829/1‑100 (MQ=255)
                                                                                      tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg               <  1:1414409/100‑1 (MQ=255)
                                                                                      tCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAg               <  1:65325/100‑1 (MQ=255)
                                                                                       cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa              >  1:286781/1‑100 (MQ=255)
                                                                                       cTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGa              <  1:3048345/100‑1 (MQ=255)
                                                                                         gTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAAt            <  2:3230398/100‑1 (MQ=255)
                                                                                           tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc          <  2:2257186/100‑1 (MQ=255)
                                                                                           tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc          <  1:3411505/100‑1 (MQ=255)
                                                                                           tCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATcc          <  1:2208923/100‑1 (MQ=255)
                                                                                            cACTGTAGGCCTGATAAGACGCATTACGCGTCGCCTCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATccc         >  2:2035771/1‑100 (MQ=255)
                                                                                                gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc     >  1:1241091/1‑100 (MQ=255)
                                                                                                gTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCgcgc     <  1:3391486/100‑1 (MQ=255)
                                                                                                  aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg   <  1:1030014/100‑1 (MQ=255)
                                                                                                  aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg   >  1:1505714/1‑100 (MQ=255)
                                                                                                  aGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAg   <  1:2569135/100‑1 (MQ=255)
                                                                                                   ggCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAgg  >  1:2101037/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGGCGTGAACGCCTTATCCGACCTACGGTTCTGTTCACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTTATTCGGCCTTGTTACCTTTATTCTGCTGCTCAATAGAAGCCAGAATCCCGCGCAGG  >  NC_000913/2662442‑2662640

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.