New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2888334 =NA (NA)6 (0.050) 5/164 NT NA noncoding (1/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2888367 = NA (NA)noncoding (34/37 nt) REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences REP200 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 153 total aligned reads displayed.

GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGC  >  NC_000913/2888235‑2888433
                                                                                                   |                                                                                                   
ggCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttg                                                                                                     <  2:894260/100‑1 (MQ=255)
ggCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttg                                                                                                     >  1:2856426/1‑100 (MQ=255)
 gCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgc                                                                                                    >  2:2192791/1‑100 (MQ=255)
 gCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgc                                                                                                    >  2:3247059/1‑100 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   <  2:941100/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   <  2:808287/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   <  1:3018221/100‑1 (MQ=255)
  cGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTttgccttgcc                                                                                                   <  2:3086039/100‑1 (MQ=255)
  aaggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGcc                                                                                                   >  1:2765902‑M1/98‑100 (MQ=255)
    ggcttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTg                                                                                                 <  1:896391‑M1/5‑1 (MQ=255)
     tAGTTTCCGCCAGCGCCAGAATGCGATCTACCGTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGa                                                                                                <  2:1443081/100‑1 (MQ=255)
     gcttcggcgactttacggtgcgtgcgggcatcattctcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGa                                                                                                >  2:2395921‑M1/95‑100 (MQ=255)
      cttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCctgtt                                                                                               >  2:2306730‑M1/94‑98 (MQ=255)
      cttcggcgactttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTg                                                                                                 <  1:2962764‑M1/5‑1 (MQ=255)
      aGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGAt                                                                                               >  2:3090731/1‑100 (MQ=255)
       ttcggcgacgttacggtgcgtgcgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGatt                                                                                              >  2:3402900‑M1/93‑99 (MQ=255)
       gTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAATTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATg                                                                                              >  1:1826244/1‑100 (MQ=255)
        tttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGc                                                                                             <  2:2141376/100‑1 (MQ=255)
        tgtCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGc                                                                                             <  1:289236/98‑1 (MQ=255)
         ttCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCg                                                                                            >  1:2955916/1‑100 (MQ=255)
             gccagcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTACTCACTTTTTGCCTTGCCTGATGCGACGc                                                                                        >  2:2432990/1‑100 (MQ=255)
                agcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCa                                                                                     <  1:1652734/100‑1 (MQ=255)
                 gcgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAc                                                                                    <  1:116999/100‑1 (MQ=255)
                  cgccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcg                                                                                   <  2:754060/100‑1 (MQ=255)
                   gccagAATGCGCTCTACCTTCGGCAGTTCGTTCCGGGCGTTTAGATAGAGTCTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAc                                                                                    <  1:1353484/98‑1 (MQ=255)
                   gccagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCAcgc                                                                                  <  2:2092315/100‑1 (MQ=255)
                     cagAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGt                                                                                <  1:2290034/100‑1 (MQ=255)
                      agAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGtt                                                                               >  1:2427568/1‑100 (MQ=255)
                       gAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTc                                                                              <  1:2557748/100‑1 (MQ=255)
                       gAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTc                                                                              <  1:423730/100‑1 (MQ=255)
                       gAAGGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCCGGTTTGGACATAGACTCGTAACGGTCTGCCTTGCCTTATGCGACGCTCCCGCGTTc                                                                              <  1:696069/100‑1 (MQ=255)
                         aTGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCtt                                                                            <  1:34672/100‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  2:1614309/100‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  2:1813093/100‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATc                                                                         <  1:1576674/100‑1 (MQ=255)
                            cGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTATTTGCCTTGCCTGACGCGACGCTCACGCGTTCTTATc                                                                         >  1:2301717/1‑100 (MQ=255)
                             gATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCa                                                                        >  1:1258855/1‑100 (MQ=255)
                             cgggcatcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCa                                                                        >  1:1385796‑M1/71‑100 (MQ=255)
                                 tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    <  2:1738102/100‑1 (MQ=255)
                                 tACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    >  2:2698778/1‑100 (MQ=255)
                                 catcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGcc                                                                    >  1:148458‑M1/67‑100 (MQ=255)
                                  atcattcgcccggtgctcgatccggcgcgtgatttgtgggattaaccatcagcccggtcttgtagGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCt                                                                   >  2:3087392‑M1/66‑100 (MQ=255)
                                    cTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTAc                                                                 >  2:358769/1‑100 (MQ=255)
                                    cTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTAc                                                                 >  1:38371/1‑100 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                <  2:2198330/100‑1 (MQ=255)
                                     ttCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACa                                                                <  2:98283/100‑1 (MQ=255)
                                       tcttccgatcttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGACTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAg                                                              <  1:2101438/90‑1 (MQ=38)
                                           aGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCg                                                          >  2:3089717/1‑100 (MQ=255)
                                            gttcgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCgg                                                         >  1:3264069/1‑100 (MQ=255)
                                               cgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGc                                                       >  1:1718562/1‑99 (MQ=255)
                                               cgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCt                                                      <  1:1049168/100‑1 (MQ=255)
                                               cgttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCt                                                      <  2:1580321/100‑1 (MQ=255)
                                                nttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTg                                                     >  2:1580084/2‑100 (MQ=255)
                                                gttcAGGGCGTTTAGATCGAGTTTGGTCATAGATTCCTCACTGTTTGCCTTCCCTGATGCGACGCCCACGCGTTCTTCTGAGGCGTACAAGACCGGGc                                                       >  1:839601/1‑98 (MQ=255)
                                                gttcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTCCAAGACCGGGCTg                                                     >  1:839261/1‑100 (MQ=255)
                                                  tcAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGAt                                                   <  2:2862173/100‑1 (MQ=255)
                                                    aGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATgg                                                 >  1:1255192/1‑100 (MQ=255)
                                                    aGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATgg                                                 >  2:1924174/1‑100 (MQ=255)
                                                     gggCGTTTAGCTCGAGTTTGGACATAGATTAATGACTGTTTGCCTTGCCTGATGCGGCGCTGACGCGTTCTTATCAGGCCTACAAGACCGGGCTGCTGGt                                                >  1:1513685/1‑100 (MQ=25)
                                                     gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                >  2:1084921/1‑100 (MQ=255)
                                                     gggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGt                                                <  2:2975830/100‑1 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  1:130279/100‑1 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  2:66321/100‑1 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               >  2:2007028/1‑100 (MQ=255)
                                                      ggCGTTTAGATCGAGTTTGGACATAGATCCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  1:3339736/100‑1 (MQ=255)
                                                       gCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGtt                                               <  1:773797/99‑1 (MQ=255)
                                                       gCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTa                                              <  1:3090714/100‑1 (MQ=255)
                                                        cGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTaa                                             >  1:2383974/1‑100 (MQ=255)
                                                          tttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAAt                                            >  2:1183442/1‑99 (MQ=255)
                                                           ttAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATcc                                          <  2:539528/100‑1 (MQ=255)
                                                              gATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcac                                       <  1:2653858/100‑1 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      >  1:1382536/1‑100 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      <  2:844451/100‑1 (MQ=255)
                                                               aTCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCcaca                                      <  1:2579716/100‑1 (MQ=255)
                                                                  gAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAAt                                   <  2:732227/100‑1 (MQ=255)
                                                                   aGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATc                                  <  2:1520331/100‑1 (MQ=255)
                                                                   aGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCCCTCTTATCAGGCCTACACGACCGGGCTGCCGGTTAATCCCACAAAt                                   >  1:530068/1‑99 (MQ=38)
                                                                      ttGGACATAGATTCCTCGCTGTTTGCCGTGCCTGATGCGACGCTCACGCATTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcg                               <  1:1117920/100‑1 (MQ=255)
                                                                       tGGACATAGATCCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCa                                 <  1:2155372/97‑1 (MQ=255)
                                                                        ggACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCCCGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCAcgcg                             <  1:2192020/100‑1 (MQ=255)
                                                                           cATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGcc                           >  2:933088/1‑99 (MQ=255)
                                                                           cATAGATTCCTCACTGTTTGCCTGGCCTGATGCTACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGcc                           <  1:515880/99‑1 (MQ=255)
                                                                            aTAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCgg                         >  1:2104310/1‑100 (MQ=255)
                                                                              aGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGAt                       >  2:779655/1‑100 (MQ=255)
                                                                               gATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATc                      <  2:1048927/100‑1 (MQ=255)
                                                                                aTTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCg                     <  2:2150385/100‑1 (MQ=255)
                                                                                   ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                  >  1:1045955/1‑100 (MQ=255)
                                                                                   ccTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGc                  >  1:404270/1‑100 (MQ=255)
                                                                                     tCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCAc                >  1:3166975/1‑100 (MQ=255)
                                                                                     tCACTGGTTGCCTTGCCTGATGCGAAGGTCACGCGTACTGATCAGGGCTAGAAGAGGGGGCTATTGGTTAATCACACAAATGACGCGCCGGATCGAg                   >  1:3328703/1‑97 (MQ=255)
                                                                                       aCTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCg              <  2:2288079/100‑1 (MQ=255)
                                                                                        cTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCgg             >  2:2691976/1‑100 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           >  2:433531/1‑100 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           >  2:408689/1‑100 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           <  2:1826252/100‑1 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           >  1:1560124/1‑100 (MQ=255)
                                                                                          gTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGc           <  2:2033620/100‑1 (MQ=255)
                                                                                               ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg      >  1:3307091/1‑100 (MQ=255)
                                                                                               ccttgcctGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAatg      <  2:1286533/100‑1 (MQ=255)
                                                                                                   GCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGc  <  2:1834951‑M1/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GGCGTTAGTTTCCGCCAGCGCCAGAATGCGATCTACCTTCGGCAGTTCGTTCAGGGCGTTTAGATCGAGTTTGGACATAGATTCCTCACTGTTTGCCTTGCCTGATGCGACGCTCACGCGTTCTTATCAGGCCTACAAGACCGGGCTGATGGTTAATCCCACAAATCACGCGCCGGATCGAGCACCGGGCGAATGATGC  >  NC_000913/2888235‑2888433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.