New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 3620220NA (NA)9 (0.080) 8/166 NT 100% coding (1029/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
?NC_000913 = 3620255 0 (0.000)coding (1064/4236 nt) rhsB Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

GTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCAC  >  NC_000913/3620166‑3620354
                                                                                         |                                                                                                   
gtATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatt                                                                                             <  1:2759982‑M2/98‑9 (MQ=255)
                           cAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgt                                                                <  1:2365964‑M2/100‑38 (MQ=255)
                                            atAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcata                                               <  2:3256848‑M2/100‑55 (MQ=255)
                                             tAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCAGGCCccggtattgagcatcggaagtaaagctgcgcacctgtttgccactacggtcatac                                              <  2:503834‑M2/100‑56 (MQ=255)
                                               aaTACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacac                                            <  1:2190925‑M2/100‑58 (MQ=255)
                                                  aCCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccac                                         <  2:700267‑M2/100‑61 (MQ=255)
                                                    cGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccg                                       <  2:689725‑M2/100‑63 (MQ=255)
                                                      gggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgcc                                     <  1:3227057‑M2/100‑65 (MQ=255)
                                                      gggCCGGATGGTGGCGCACCGTCACACGGGCCGGCCccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgcc                                     <  2:2756956‑M2/100‑65 (MQ=255)
                                                                                    ccggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgc       >  2:3253040‑M2/1‑6 (MQ=255)
                                                                                    ccggccccggtatctatcaccgtaagcaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtcgcgtccagccatagcg        >  1:3243322‑M2/1‑6 (MQ=255)
                                                                                     cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgca      >  2:2167350‑M2/1‑5 (MQ=255)
                                                                                     cggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgc       <  1:713568‑M2/99‑95 (MQ=255)
                                                                                      ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     <  2:2282067‑M2/100‑97 (MQ=255)
                                                                                      ggccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcac     >  2:54718‑M2/1‑4 (MQ=255)
                                                                                       gccccggtatttatcatcgtaagtaaagctgcgcacctgttttccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    >  1:2404540‑M2/1‑3 (MQ=255)
                                                                                       gccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    >  2:3321950‑M2/1‑3 (MQ=255)
                                                                                       gccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacc    <  2:937279‑M2/100‑98 (MQ=255)
                                                                                        ccccggtatttatcatcgtaagtaaagctgcggacctgtctgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   >  1:2399471‑M2/1‑2 (MQ=255)
                                                                                        ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  2:2674809‑M2/100‑99 (MQ=255)
                                                                                        ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  1:1927535‑M2/100‑99 (MQ=255)
                                                                                        ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  2:1131722‑M2/100‑99 (MQ=255)
                                                                                        ccccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   >  2:3393624‑M2/1‑2 (MQ=255)
                                                                                        ccccggtatttatcatcgtaagtaaagctgcgaacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcacca   <  2:3241797‑M2/100‑99 (MQ=255)
                                                                                         cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccatccatagcgcacca   <  1:2357886‑M2/99‑99 (MQ=255)
                                                                                         cccggtatttatcatcgtaagtaaagctgcgcacctgtttgccactacggtcatacaccaccgccagttcgccgcgtggcgtccagccatagcgcaccag  >  1:343969‑M2/1‑1 (MQ=255)
                                                                                         |                                                                                                   
GTATGACCGTAGTGGCAAACAGGTGCGCAGCTTTACTTACGATGATAAATACCGGGGCCGGATGGTGGCGCACCGTCACACGGGCCGGCCGGAAATCCGTTACCGTTACGACAGCGACGGGCGGGTGACAGAACAGCTAAACCCGGCAGGCTTAAGCTACACGTATCAGTATGAGAAAGACCGCATCAC  >  NC_000913/3620166‑3620354

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.