BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4245169	NA (NA)	3 (0.030)	3/162	NT	NA	noncoding (78/126 nt)	REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences
*	?	NC_000913	= 4245182	NA (NA)	3 (0.030)	3/162	NT	NA	noncoding (91/126 nt)	REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences	REP315 (repetitive extragenic palindromic) element; contains 3 REP sequences

Only 100 of 167 total aligned reads displayed.

TTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGA  >  NC_000913/4245083‑4245280

ttcCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGttt                                                                                                    <  1:2519793/100‑1 (MQ=255)

  ccTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtg                                                                                                  >  1:112815‑M2/1‑98 (MQ=255)

  ccTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtg                                                                                                  <  1:2564226‑M2/100‑3 (MQ=255)

   ntcATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgt                                                                                                 <  1:2757385‑M2/99‑4 (MQ=255)

   cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgt                                                                                                 >  1:539995‑M2/1‑97 (MQ=255)

   cTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgt                                                                                                 >  1:1885446‑M2/1‑97 (MQ=255)

    tCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgta                                                                                                >  1:1127730‑M2/1‑96 (MQ=255)

     cATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgtag                                                                                               >  1:1303265‑M2/1‑95 (MQ=255)

     cATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgtag                                                                                               >  1:3025826‑M2/1‑95 (MQ=255)

      aTTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgtagg                                                                                              <  1:3254863‑M2/100‑7 (MQ=255)

          cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCgg                                                                                          >  1:1320952/1‑100 (MQ=255)

          cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCgg                                                                                          >  1:1962363/1‑100 (MQ=255)

          cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCgg                                                                                          <  1:676727/100‑1 (MQ=255)

          cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCgg                                                                                          <  1:1526015/100‑1 (MQ=255)

          cAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCCTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCg                                                                                           >  1:1549781/1‑99 (MQ=255)

             gACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACa                                                                                       >  2:663536/1‑100 (MQ=255)

               ccgATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCGACATACGTTTCGGTTTTGTAGGCCgg                                                                                          <  1:3055347/93‑1 (MQ=255)

               cGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAg                                                                                     >  2:90404/1‑100 (MQ=255)

                ggATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAgg                                                                                    >  2:2032774/1‑100 (MQ=255)

                ggATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAgg                                                                                    <  1:3061506/100‑1 (MQ=255)

                    aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGtt                                                                                >  1:848255/1‑100 (MQ=255)

                    aaGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGtt                                                                                <  2:3348061/100‑1 (MQ=255)

                      ggCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCa                                                                              <  2:798708/100‑1 (MQ=255)

                      ggCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCa                                                                              <  2:961104/100‑1 (MQ=255)

                        cTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcg                                                                            >  2:1163607/1‑100 (MQ=255)

                        attagaCGCCGTATCCGACAACAACTGCCTGATGCGGCGCTGACGCGTCTGATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcg                                                                            <  1:1820142/95‑1 (MQ=39)

                         tttCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcgc                                                                           >  2:3654/1‑100 (MQ=255)

                          ttCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcgcc                                                                          <  2:667630/100‑1 (MQ=255)

                          tgaaagCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCAcgcc                                                                          >  2:726397/6‑100 (MQ=255)

                          tgaaagCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGATTTGTAGGCCGGACAAGGCGTTCAcg                                                                            >  1:414951/6‑98 (MQ=255)

                             aCGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCa                                                                       <  1:1917043/100‑1 (MQ=255)

                              cGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCAt                                                                      >  1:2294638/1‑100 (MQ=255)

                              cGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCAt                                                                      >  1:1473469/1‑100 (MQ=255)

                              cGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCAt                                                                      >  1:3140501/1‑100 (MQ=255)

                              cGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCAt                                                                      >  1:2042615/1‑100 (MQ=255)

                               gCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCCGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACCCCGCATc                                                                     >  2:1047431/1‑100 (MQ=255)

                                ccTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATcc                                                                    >  1:2366819/1‑100 (MQ=255)

                                ccTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATcc                                                                    >  1:3080284/1‑100 (MQ=255)

                                 cTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCg                                                                   <  2:2922011/100‑1 (MQ=255)

                                    aTCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCa                                                                <  1:2906536/100‑1 (MQ=255)

                                    aTCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCa                                                                >  2:1608440/1‑100 (MQ=255)

                                     tCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAt                                                               <  2:2572292/100‑1 (MQ=255)

                                      ccGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAtt                                                              <  2:2361827/100‑1 (MQ=255)

                                       cGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGTCCTACATACGTTGCGGGGTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAttt                                                             >  2:2346935/1‑100 (MQ=25)

                                       cGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCAttt                                                             <  2:1587216/100‑1 (MQ=255)

                                         acaacaACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGTATCCGGCAtttaa                                                           <  2:2322456/100‑3 (MQ=255)

                                            acaacTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGACGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAg                                                        <  1:1821486/100‑1 (MQ=255)

                                                cTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGACGTTCACGCCGCATCCGGCATTTCACAGCAtt                                                    >  1:2493647/1‑100 (MQ=255)

                                                  gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTGGGCCGGACAAGGCGTTCAAGACGCATCCGGCTTTTCACAGCa                                                      >  1:3245799/1‑96 (MQ=25)

                                                  gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTAc                                                  >  2:787021/1‑100 (MQ=255)

                                                  gCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTAc                                                  >  2:837016/1‑100 (MQ=255)

                                                    cTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACtt                                                >  1:2081753/1‑100 (MQ=255)

                                                     tGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTg                                               >  2:1826578/1‑100 (MQ=255)

                                                       aTGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGt                                             <  2:2186465/100‑1 (MQ=255)

                                                        tGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTg                                            <  2:623709/100‑1 (MQ=255)

                                                         gCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGa                                           <  2:2574050/100‑1 (MQ=255)

                                                          cGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTtgtaggcctgataagacgcgtcagcgtcgcatcaggcagttgttgtcggataaggcgt                                          <  1:3198160‑M2/100‑59 (MQ=255)

                                                          cGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGAt                                          >  1:2748677/1‑100 (MQ=255)

                                                           gACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                                         >  2:1057093/1‑100 (MQ=255)

                                                           gACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                                         <  2:2234330/100‑1 (MQ=255)

                                                           gACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                                         >  1:1747091/1‑100 (MQ=255)

                                                           gACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATa                                         <  2:1785047/100‑1 (MQ=255)

                                                              gCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGa                                      >  2:2840352/1‑100 (MQ=255)

                                                              gCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGa                                      >  2:474413/1‑100 (MQ=255)

                                                               cTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAg                                     >  1:1446955/1‑100 (MQ=255)

                                                               cTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAg                                     <  1:1608433/100‑1 (MQ=255)

                                                               cTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAg                                     <  1:77829/100‑1 (MQ=255)

                                                                 gACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTc                                   >  2:3323017/1‑100 (MQ=255)

                                                                 gACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTc                                   <  1:139364/100‑1 (MQ=255)

                                                                 gACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTc                                   <  2:2672974/100‑1 (MQ=255)

                                                                   cgcgTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTg                                 >  1:263659/1‑100 (MQ=255)

                                                                       tCTTATCAGGCCTACATACGTTTCGGTTATGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGGCTGcgcg                             >  2:75787/1‑100 (MQ=255)

                                                                        cTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGt                            >  2:2427025/1‑100 (MQ=255)

                                                                          tATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCt                          >  2:1328498/1‑100 (MQ=255)

                                                                          tATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCt                          >  2:1952888/1‑100 (MQ=255)

                                                                          tATCAGGCCTACATACGATTCGAATTTGTAGGCCAGACGAGTCGTTCACGCTGCATCCGGCATTTCTCATCATTAATTGGTGATCCGa                                      >  1:2037392/1‑88 (MQ=19)

                                                                            tCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCttt                        <  2:1696582/100‑1 (MQ=255)

                                                                             cAGGCCTACATACGTTTCGGTTTtgtaggcctgataagacgcgtcagcgtcgcatcaggcagttgttgtcggataaggcgtgaacgccttatccgtcctg                       <  1:2885191‑M2/100‑78 (MQ=255)

                                                                             cAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTc                       <  2:1039749/100‑1 (MQ=255)

                                                                             cAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTc                       >  2:1748302/1‑100 (MQ=255)

                                                                               ggCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAg                     >  2:2693542/1‑100 (MQ=255)

                                                                                gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                    <  2:3183568/100‑1 (MQ=255)

                                                                                gCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                    <  1:554572/100‑1 (MQ=255)

                                                                                 ccTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAggg                   <  2:2748694/100‑1 (MQ=255)

                                                                                 ccTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAgg                    <  1:554573/99‑1 (MQ=255)

                                                                                   tACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCt                 >  1:2940738/1‑100 (MQ=255)

                                                                                       tACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCAt             >  1:35872/1‑100 (MQ=255)

                                                                                          gTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGa          >  1:1162045/1‑100 (MQ=255)

                                                                                          gTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGa          >  2:563797/1‑100 (MQ=255)

                                                                                          gTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGa          >  2:493892/1‑100 (MQ=255)

                                                                                          gTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGa          >  2:2518483/1‑100 (MQ=255)

                                                                                          gTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGa          >  2:2867989/1‑100 (MQ=255)

                                                                                           tttCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGAc         <  1:2840132/100‑1 (MQ=255)

                                                                                           tttCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGAc         <  2:1962374/100‑1 (MQ=255)

                                                                                           tttCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGAc         <  1:866219/100‑1 (MQ=255)

                                                                                              cGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGt      >  1:2235729/1‑100 (MQ=255)

                                                                                              cGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGt      >  2:239709/1‑100 (MQ=255)

                                                                                               ggTTTTGTAGGCCGGACAAGGATTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTc     <  1:3101785/100‑1 (MQ=255)

                                                                                                 ttttGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTg   <  2:1275203/100‑1 (MQ=255)

                                                                                                  tttGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTga  >  2:2371910/1‑100 (MQ=255)

TTCCTCATTCCAGGACGGATAAGGCTTTCACGCCTTATCCGACAACAACTGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACATACGTTTCGGTTTTGTAGGCCGGACAAGGCGTTCACGCCGCATCCGGCATTTCACAGCATTACTTGGTGATACGAGTCTGCGCGTCTTTCAGGGCTTCATCGACAGTCTGA  >  NC_000913/4245083‑4245280

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.