New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4602159 =109 (0.880)10 (0.090) 4/164 NT 9.4% coding (700/771 nt) yjjP DUF1212 family inner membrane protein
?NC_000913 4602186 = 93 (0.820)coding (673/771 nt) yjjP DUF1212 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 137 total aligned reads displayed.

TCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTGGGGGT  >  NC_000913/4602088‑4602285
                                                                                                  |                                                                                                   
tctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCg                                                                                                    >  2:248026‑M1/72‑100 (MQ=255)
 ctgctgttattgtcgtgctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCg                                                                                                    >  1:1955278‑M1/71‑99 (MQ=255)
 ctgctgctagtgccgggctttccgttgattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                                                   >  1:104354‑M1/71‑100 (MQ=255)
 cacaCCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                                                   <  1:719768/100‑1 (MQ=255)
  tggtgctagtgccgggctttccgttgattaatgccgtcgacgatatgtttaaaggccacatcaatacctGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                                                   >  1:1907189‑M1/70‑99 (MQ=255)
  tgctgctagtgccgggctttccgttgattaatgccgtcgccggtatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCGGt                                                                                                  >  1:2404336‑M1/70‑100 (MQ=255)
  acacCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTACCAGTCCGGt                                                                                                  >  2:646497/1‑100 (MQ=255)
   gctgctagtgccgggctttccgtggattaatgccgtcgccgatatgtttaaaggccacatcaataccgGACTGGCGATCGCCCAGCGTGCCAGTCCgg                                                                                                   >  1:960490‑M1/69‑98 (MQ=255)
   cacCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTa                                                                                                 >  2:1128180/1‑100 (MQ=255)
   cacCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTa                                                                                                 >  1:3009826/1‑100 (MQ=255)
     cccATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTAtt                                                                                               >  1:252240/1‑100 (MQ=255)
      ccATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTg                                                                                              <  1:2174831/100‑1 (MQ=255)
      ccATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTg                                                                                              >  1:317980/1‑100 (MQ=255)
       cATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGa                                                                                             >  1:1368180/1‑100 (MQ=255)
         tCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtg                                                                                           <  1:2240786/100‑1 (MQ=255)
         tCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtg                                                                                           <  2:3319974/100‑1 (MQ=255)
          ccGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtgt                                                                                          <  2:935895/100‑1 (MQ=255)
           cgcgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtgtg                                                                                         <  1:3144961/100‑1 (MQ=255)
           cgcgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGAtgtg                                                                                         <  2:1425123/100‑1 (MQ=255)
             cgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGc                                                                                       >  2:1884984/1‑100 (MQ=255)
             cgTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGc                                                                                       <  2:2752064/100‑1 (MQ=255)
                 gCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCttt                                                                                   <  1:1753312/100‑1 (MQ=255)
                 gCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCttt                                                                                   <  2:3170562/100‑1 (MQ=255)
                  cccccAAATCGTCAGTGCCAGCACTACGCCGACGCAGGGAGCCAGTGTCAGCAGACTGGCGATCGCCCGGCGTGCCAGTCCGGTATTGATGTGGCCttt                                                                                   <  1:122736/99‑1 (MQ=255)
                   ccccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaa                                                                                 >  2:1297106/1‑100 (MQ=255)
                    cccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTaaa                                                                                <  2:1717987/100‑1 (MQ=255)
                     ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                                               >  1:866061/1‑100 (MQ=255)
                     ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                                               <  1:536296/100‑1 (MQ=255)
                     ccAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAAc                                                                               <  2:2902610/100‑1 (MQ=255)
                     ccAAATCGTCAGTGCCATCACTAAGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGGATTGATGTGGCCTTTAAAc                                                                               >  1:578011/1‑100 (MQ=255)
                      cAAACCCTCAGTGCCATCACTACGCCAACGCAGGTAGCCAGGGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTAATGTGGCCTTTAAACa                                                                              <  1:2301597/100‑1 (MQ=255)
                          tCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATc                                                                          >  2:1804994/1‑100 (MQ=255)
                           cGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCg                                                                         <  1:2948405/100‑1 (MQ=255)
                             tCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGc                                                                       <  2:1827385/100‑1 (MQ=255)
                                gTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGAc                                                                    >  1:1149743/1‑100 (MQ=255)
                                 tGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACg                                                                   <  1:243492/100‑1 (MQ=255)
                                  gCCATCACAAAGCCGACACAGGTAGCCAGCGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGACCGGTATAGAAGTGGCCTCAAAACatatgagagacg                                                                   >  1:2644397/1‑91 (MQ=255)
                                   ccATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGc                                                                 <  1:1847966/100‑1 (MQ=255)
                                   ccATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGc                                                                 <  1:465563/100‑1 (MQ=255)
                                    cATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCa                                                                >  1:3255749/1‑100 (MQ=255)
                                    cATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCa                                                                <  1:401136/100‑1 (MQ=255)
                                     aTCACTACGCCGACGCAGGTAGCTAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAt                                                               <  1:1201783/100‑1 (MQ=255)
                                      tCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCAtt                                                              <  2:714363/100‑1 (MQ=255)
                                        aCTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTaa                                                            >  1:687271/1‑100 (MQ=255)
                                        aCTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTaa                                                            >  2:1213351/1‑100 (MQ=255)
                                        aCTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTaa                                                            >  1:1038157/1‑100 (MQ=255)
                                        aCTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTaa                                                            >  2:3066793/1‑100 (MQ=255)
                                         cTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCATCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAAt                                                           >  2:397781/1‑100 (MQ=255)
                                          tACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATc                                                          >  1:2069778/1‑100 (MQ=255)
                                            cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                                        >  2:1449240/1‑100 (MQ=255)
                                            cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                                        >  1:736203/1‑100 (MQ=255)
                                            cGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGATATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCaa                                                        >  1:2191174/1‑100 (MQ=255)
                                             gCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAAc                                                       <  2:1514278/100‑1 (MQ=255)
                                             gCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAAc                                                       <  1:2173528/100‑1 (MQ=255)
                                                       gTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCg                                             <  2:1723201/100‑1 (MQ=255)
                                                         aGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGc                                           <  2:781630/100‑1 (MQ=255)
                                                         aGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGCTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGc                                           <  1:1456482/100‑1 (MQ=255)
                                                          gCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGc                                           >  2:2237662/1‑99 (MQ=255)
                                                            cAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACt                                        >  2:1231023/1‑100 (MQ=255)
                                                            cAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACt                                        >  2:2612646/1‑100 (MQ=255)
                                                               tgtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagc                                     >  2:2682507/1‑100 (MQ=255)
                                                                gtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagca                                    >  2:585333/1‑100 (MQ=255)
                                                                gtCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagca                                    >  2:2166463/1‑100 (MQ=255)
                                                                 tCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagcag                                   >  2:2984811/1‑100 (MQ=255)
                                                                  cagcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagcagc                                  >  2:2158124/1‑100 (MQ=255)
                                                                   agcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAgcagca                                 >  1:3004019/1‑100 (MQ=255)
                                                                   accggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATACCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAgcagca                                 >  1:2404336‑M2/32‑100 (MQ=255)
                                                                    gcagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                                >  2:1043683/1‑100 (MQ=255)
                                                                    gcagACGGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTagcag                                   <  2:3099825/97‑1 (MQ=255)
                                                                    ccggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCCACGGAAAGCCCGGCACTagcagc                                  >  1:960490‑M2/31‑98 (MQ=255)
                                                                    ccggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                                >  1:104354‑M2/31‑100 (MQ=255)
                                                                    ccggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                                >  2:2799081‑M2/31‑100 (MQ=255)
                                                                    ccggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                                >  2:1293763‑M2/31‑100 (MQ=255)
                                                                    ccggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGcagcag                                >  1:777232‑M2/31‑100 (MQ=255)
                                                                     cggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGa                               >  2:248026‑M2/30‑100 (MQ=255)
                                                                     cggactggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCACGACAATAAcagcag                                >  1:1955278‑M2/30‑99 (MQ=255)
                                                                     cagACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGa                               <  2:1166153/100‑1 (MQ=255)
                                                                       GACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAAc                             <  1:518329‑M1/100‑1 (MQ=255)
                                                                        ACTGGCGAACTCACAGCGTGCCAGTCCGGTATTGATGTTGCCTGCAAACAGATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAAc                             >  1:36098‑M1/1‑99 (MQ=255)
                                                                         CTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGc                           <  2:1595551‑M1/100‑1 (MQ=255)
                                                                         CTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGc                           <  2:1224041‑M1/100‑1 (MQ=255)
                                                                           ggcacgctgggcgatcgccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTg                         >  1:3324191‑M2/24‑100 (MQ=255)
                                                                             CGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGc                       <  2:1417047‑M1/100‑1 (MQ=255)
                                                                              gATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcg                      >  1:2465476/1‑100 (MQ=255)
                                                                              gATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcg                      >  1:2465373/1‑100 (MQ=255)
                                                                              gATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggc                       >  1:2812501/1‑99 (MQ=255)
                                                                               aTCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcgg                     <  2:1822892/100‑1 (MQ=255)
                                                                                tCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTggcggc                    <  2:2692633/100‑1 (MQ=255)
                                                                                 cGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGcc                   >  2:2745325/1‑100 (MQ=255)
                                                                                  gCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCa                  >  2:1977319/1‑100 (MQ=255)
                                                                                      aGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGc              <  2:2070751/100‑1 (MQ=255)
                                                                                            ccagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAAtggt        >  2:2176128‑M2/7‑100 (MQ=255)
                                                                                             cagtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAAtggtg       <  2:252242‑M2/95‑1 (MQ=255)
                                                                                               gtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTggg     >  2:3214317‑M2/4‑100 (MQ=255)
                                                                                               gtcCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTggg     >  2:965583‑M2/4‑100 (MQ=255)
                                                                                                 cCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTggggg   >  2:2104337‑M2/2‑100 (MQ=255)
                                                                                                 cCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTggg     >  1:799878‑M2/2‑98 (MQ=255)
                                                                                                 cCGGGATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTggggg   <  2:1350552‑M2/99‑1 (MQ=255)
                                                                                                  cGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTGGGGGt  >  1:364219/1‑100 (MQ=255)
                                                                                                  cGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTGGGGGt  >  2:3243502/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TCACACCCATCCGCGTAGCCCCCAAATCGTCAGTGCCATCACTACGCCGACGCAGGTAGCCAGTGTCAGCAGACTGGCGATCGCCCAGCGTGCCAGTCCGGTATTGATGTGGCCTTTAAACATATCGGCGACGGCATTAATCAACGGAAAGCCCGGCACTAGCAGCAGAACGCTGGCGGCCATCGCAATGGTGGGGGT  >  NC_000913/4602088‑4602285

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.