New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4606558 =NA (NA)9 (0.080) 6/164 NT NA noncoding (1/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4606590 = NA (NA)noncoding (33/92 nt) REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences REP351 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 148 total aligned reads displayed.

TGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCG  >  NC_000913/4606491‑4606689
                                                                                                   |                                                                                                   
tgtAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGcc                                                                                                     <  2:898363/100‑1 (MQ=255)
 gtAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCt                                                                                                    <  1:169102/100‑1 (MQ=255)
  accgtgtcggatgcggcgtgaacgccttatccgacctacaaaacctgcacgttagcccttcgtagGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTa                                                                                                   >  1:2235649‑M1/66‑100 (MQ=255)
   aaTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTAc                                                                                                  >  1:3138565/1‑100 (MQ=255)
   aaTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTAc                                                                                                  <  2:1157887/100‑1 (MQ=255)
    aTTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACg                                                                                                 <  2:2907079/100‑1 (MQ=255)
       gCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAg                                                                                              <  1:3204788/100‑1 (MQ=255)
       gCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAg                                                                                              >  2:2792300/1‑100 (MQ=255)
        caggAAAAATGTCAATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAgg                                                                                             >  2:2304816/3‑100 (MQ=255)
        cTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAgg                                                                                             >  1:3228830/1‑100 (MQ=255)
        cTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAgg                                                                                             >  2:3376904/1‑100 (MQ=255)
         ttgAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAggg                                                                                            <  2:585521/98‑1 (MQ=255)
         tGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAggg                                                                                            >  2:2806276/1‑100 (MQ=255)
          ggAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGc                                                                                           <  2:1574967/100‑1 (MQ=255)
          ggAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGc                                                                                           >  2:133390/1‑100 (MQ=255)
          ggAAAAATGTCCATCAGGAAACTAGCGTGCAGGGTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGc                                                                                           >  1:1351663/1‑100 (MQ=255)
             aaaaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTaa                                                                                        <  2:1402481/100‑1 (MQ=255)
             aaaaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAAATGCCAGATGCGACGCTGGCGAGGCTTATCTGGCCTACGAAGGGCTaa                                                                                        >  2:1738024/1‑100 (MQ=255)
              aaaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGTGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAAc                                                                                       <  2:202351/100‑1 (MQ=255)
               aaTGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACg                                                                                      <  1:2919690/100‑1 (MQ=255)
                    ccATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAg                                                                                 >  1:2002968/1‑100 (MQ=255)
                     cATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAgg                                                                                >  1:2316857/1‑100 (MQ=255)
                     cATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAgg                                                                                >  1:885724/1‑100 (MQ=255)
                     cATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAgg                                                                                <  2:3055650/100‑1 (MQ=255)
                     cATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAgg                                                                                >  2:1359222/1‑100 (MQ=255)
                        cAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGttt                                                                             >  1:424139/1‑100 (MQ=255)
                        cAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGCGCAggct                                                                              >  1:495677/1‑97 (MQ=255)
                          ggAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTg                                                                           >  1:2529941/1‑100 (MQ=255)
                          ggAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTg                                                                           >  2:1528080/1‑100 (MQ=255)
                          ggAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTg                                                                           <  1:772743/100‑1 (MQ=255)
                           gAAACTTGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGt                                                                          <  2:1330234/100‑1 (MQ=255)
                            aaaCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                         <  1:2533958/100‑1 (MQ=255)
                            aaaCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTa                                                                         <  1:133828/100‑1 (MQ=255)
                              aCTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAgg                                                                       <  1:3163254/100‑1 (MQ=255)
                               cTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGt                                                                      >  2:1758808/1‑100 (MQ=255)
                               cTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGt                                                                      <  2:124657/100‑1 (MQ=255)
                                    gTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGAt                                                                 >  1:1406552/1‑100 (MQ=255)
                                    gTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGAt                                                                 >  1:1007748/1‑100 (MQ=255)
                                       cAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGGGCAGGTTTTGTAGGTCGGATAAg                                                              >  1:2952212/1‑100 (MQ=255)
                                        aGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAgg                                                             <  1:2768364/100‑1 (MQ=255)
                                        aGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAgg                                                             <  2:51501/100‑1 (MQ=255)
                                         ggTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGc                                                            >  1:1203921/1‑100 (MQ=255)
                                          gTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCg                                                           >  1:1396644/1‑100 (MQ=255)
                                           tttGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGt                                                          <  1:966010/100‑1 (MQ=255)
                                            ttGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGAtgcggcgtg                                                         <  1:2727617/100‑9 (MQ=255)
                                            ttGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGtt                                                         <  1:2582940/100‑1 (MQ=255)
                                              gggatgcatgcGGGGGCAGATGCCAGTTGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTc                                                        <  2:2921311/96‑1 (MQ=255)
                                              ggTATGCATGCGGGGGCAGATGCCAGATGCGGCGCTGGCGCGTGTTATCTGGCATGCGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATaacg                                                             <  1:3295593/94‑3 (MQ=25)
                                              ggTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCa                                                       >  2:2558243/1‑100 (MQ=255)
                                              ggTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCa                                                       >  2:3184041/1‑100 (MQ=255)
                                                tATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcg                                                     >  1:652518/1‑100 (MQ=255)
                                                tATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcg                                                     >  1:710032/1‑100 (MQ=255)
                                                   gcatgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgccg                                                  <  2:2177456/100‑1 (MQ=255)
                                                    catgcGGGTGCAGATGACAGATGCGACGCTGGCGCGTCTTATCTGGACTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCAcgcc                                                   <  1:125547/98‑1 (MQ=255)
                                                      tgcGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCAt                                               >  1:423891/1‑100 (MQ=255)
                                                          ggggCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa                                           >  1:101935/1‑100 (MQ=255)
                                                          ggggCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa                                           <  2:2732979/100‑1 (MQ=255)
                                                          ggggCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGa                                           >  2:2082143/1‑100 (MQ=255)
                                                             gCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGATAACGTGCAGGTTTTGTAGGTCGGATGCGGCGTGAACGCCTTATCCGacct                                        <  1:1352509/100‑3 (MQ=18)
                                                               gtaggccagataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                      >  1:436360‑M2/37‑100 (MQ=255)
                                                                taggccagataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGt                                     >  1:2235649‑M2/36‑100 (MQ=255)
                                                                taggccagataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGt                                     >  2:140350‑M2/36‑100 (MQ=255)
                                                                natgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACgg                                      >  1:2359199/2‑99 (MQ=255)
                                                                 atgccagatgcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTa                                    <  1:673568/100‑1 (MQ=255)
                                                                  ggccagataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTAt                                   >  2:2966522‑M2/34‑100 (MQ=255)
                                                                  ggccagataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTAt                                   >  1:88097‑M2/34‑100 (MQ=255)
                                                                    CCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTc                                 <  2:906483‑M1/100‑1 (MQ=255)
                                                                    CCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTc                                 <  2:2385138‑M1/100‑1 (MQ=255)
                                                                     CAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCg                                <  2:712372‑M1/100‑1 (MQ=255)
                                                                     CAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCg                                <  2:527514‑M1/100‑1 (MQ=255)
                                                                      agataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                               >  1:967040‑M2/30‑100 (MQ=255)
                                                                      agataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                               >  1:2598358‑M2/30‑100 (MQ=255)
                                                                      AGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCgg                               >  2:2621201‑M1/1‑100 (MQ=255)
                                                                       gataagacgcgccagcgtcgcatctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGc                              <  2:2235661‑M2/72‑1 (MQ=255)
                                                                       GATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGc                              <  2:1552085‑M1/100‑1 (MQ=255)
                                                                        ATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCg                             >  1:1758800‑M1/1‑100 (MQ=255)
                                                                         TGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGa                            >  2:820275‑M1/1‑100 (MQ=255)
                                                                          gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgag                           <  2:1585941/100‑1 (MQ=255)
                                                                          gcGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCgag                           <  2:2656340/100‑1 (MQ=255)
                                                                            gACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGGGCAGGTTCTGGAGGTCGGATAAGGCGTTCACGCCGCAGCCGACACGGTATTCGGCgat                           <  1:2835982/98‑2 (MQ=37)
                                                                             aCGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATa                        <  2:710034/100‑1 (MQ=255)
                                                                              cGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATaa                       >  2:3187395/1‑100 (MQ=255)
                                                                              cGCTGGCGCGTCTTATCTGGCCTAAGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACCCCGCATCCGACACGGTATTCGGCGAGATa                        >  1:1113826/1‑99 (MQ=255)
                                                                                 tGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAAttn                    <  2:155858/100‑2 (MQ=255)
                                                                                 tGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTa                    <  1:1307828/100‑1 (MQ=255)
                                                                                 tGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTa                    <  2:3138583/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                 >  1:3334153/1‑100 (MQ=255)
                                                                                    cgcgTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAAcc                 <  2:2002979/100‑1 (MQ=255)
                                                                                        tCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttc             <  2:793087/100‑1 (MQ=255)
                                                                                        tCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttc             >  1:100623/1‑100 (MQ=255)
                                                                                         cTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttct            >  1:12573/1‑100 (MQ=255)
                                                                                           tATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttcttc          >  1:3047252/1‑100 (MQ=255)
                                                                                           tATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTttcttc          <  1:2876647/100‑1 (MQ=255)
                                                                                             tctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGc        <  2:3121650‑M2/94‑1 (MQ=255)
                                                                                              ctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGcc       <  2:1268371‑M2/95‑1 (MQ=255)
                                                                                              ctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGcc       <  1:2706939‑M2/95‑1 (MQ=255)
                                                                                              ctggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGcc       <  1:2659366‑M2/95‑1 (MQ=255)
                                                                                                ggcCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTg     <  2:1517339‑M2/97‑1 (MQ=255)
                                                                                                  cCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGc   <  2:1406558‑M2/99‑1 (MQ=255)
                                                                                                   cTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCg  <  1:1842143/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TGTAATTGCTGGAAAAATGTCCATCAGGAAACTAGCGTGCAGGTTTGGTATGCATGCGGGGGCAGATGCCAGATGCGACGCTGGCGCGTCTTATCTGGCCTACGAAGGGCTAACGTGCAGGTTTTGTAGGTCGGATAAGGCGTTCACGCCGCATCCGACACGGTATTCGGCGAGATAATTAACCTTTCTTCGCCTGGCG  >  NC_000913/4606491‑4606689

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.