New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1852545 =NA (NA)11 (0.100) 5/156 NT NA intergenic (+17/+76) pncA/ydjE nicotinamidase/pyrazinamidase/putative MFS sugar transporter, membrane protein
?NC_000913 1852562 = NA (NA)noncoding (1/36 nt) REP132 (repetitive extragenic palindromic) element; contains 1 REP sequences REP132 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 197 total aligned reads displayed.

ATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCTTCCGCG  >  NC_000913/1852463‑1852661
                                                                                                   |                                                                                                   
aagagatttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacaatgccagtacagaattg                                                                                                     >  2:2656866‑M2/100‑100 (MQ=255)
 tGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGt                                                                                                    >  1:511275/1‑100 (MQ=255)
  gtagaTGTCAGCTGCTTGTTTAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTAGCATTGt                                                                                                    >  1:76257/3‑99 (MQ=255)
  gagatttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacaatgccagtacagaattGTa                                                                                                   <  1:282134‑M2/3‑1 (MQ=255)
    gatttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacaatgccagtacagaattGTAgg                                                                                                 >  1:2870919‑M2/96‑100 (MQ=255)
    gatttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAgg                                                                                                 >  1:1231328‑M1/79‑100 (MQ=255)
     atttctgaggtgcattcaatcgttcgttgatggcatcaattgccagatgtgcgactgacgtgttttagttggcctacAATTCTGTACTGGCATTGTaggt                                                                                                >  1:423029‑M1/78‑99 (MQ=255)
     atttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacttgttttatttggcctacAATTCTGTACTGGCATTGTAGGc                                                                                                >  1:1000826‑M1/78‑100 (MQ=255)
     atttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacaatgccagtacagaattGTAGGc                                                                                                <  1:503146‑M2/6‑1 (MQ=255)
     atttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTaggn                                                                                                >  2:469651‑M1/78‑99 (MQ=255)
     atttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAGGc                                                                                                >  2:585028‑M1/78‑100 (MQ=255)
      tttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAGGcc                                                                                               >  1:1765234‑M1/77‑100 (MQ=255)
      tttctgaggtgaattaaatctttcgttgatggcatcaattgccagatgtgccactgacgtgttttatttggcctacAATTCTGTACTGGCATTGTAGGcc                                                                                               >  1:2881000‑M1/77‑100 (MQ=255)
       ttctgatgtgaattaaaacttgcggtgatggcatcaattgccagatgtgccactgacgtgttttagttggcctacaatgccagtacagaattGTAGGcc                                                                                               <  1:3068170‑M2/7‑1 (MQ=255)
        gTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCaa                                                                                             >  1:948780/1‑100 (MQ=255)
         tCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCaaa                                                                                            >  2:3338228/1‑100 (MQ=255)
         tCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCaaa                                                                                            >  2:540698/1‑100 (MQ=255)
          cagcagCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAAt                                                                                           >  1:2969687/1‑100 (MQ=255)
          cagcagCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAAt                                                                                           <  2:2472627/100‑1 (MQ=255)
           agcagcTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTCGCCTACAATTCTGTACTGGCATTGTAGGCCAAATa                                                                                          >  2:3352921/1‑100 (MQ=255)
           agcagcTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGAGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATa                                                                                          >  1:638552/1‑100 (MQ=255)
             cagcTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATaaa                                                                                        <  2:1512803/100‑1 (MQ=255)
             cagcTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATaaa                                                                                        >  2:594669/1‑100 (MQ=255)
               gcTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAac                                                                                      >  2:2276529/1‑100 (MQ=255)
               gcTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACAGGCATTGTAGGCCAAATaaaa                                                                                       >  1:1558237/1‑99 (MQ=255)
                cTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAac                                                                                      <  1:3411255/99‑1 (MQ=255)
                  ggggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACg                                                                                   <  1:592201/100‑1 (MQ=255)
                   gggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGt                                                                                  >  2:2433989/1‑100 (MQ=255)
                    ggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTc                                                                                 >  2:2372171/1‑100 (MQ=255)
                    ggCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTc                                                                                 >  2:3013313/1‑100 (MQ=255)
                      cAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAg                                                                               >  2:1526755/1‑100 (MQ=255)
                        aCGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTg                                                                             >  1:850684/1‑100 (MQ=255)
                         cGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGTATTGTAGGCCAAATAAAACACGTCAGTgg                                                                            <  2:2782633/100‑1 (MQ=255)
                         cGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTgg                                                                            >  2:944414/1‑100 (MQ=255)
                          gCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGc                                                                           <  2:2251912/100‑1 (MQ=255)
                          gCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGc                                                                           <  1:232908/100‑1 (MQ=255)
                           cTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGca                                                                          >  1:1955328/1‑100 (MQ=255)
                               ataCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATc                                                                      >  2:475889/1‑100 (MQ=255)
                                taCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCt                                                                     >  1:184886/1‑100 (MQ=255)
                                taCGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCt                                                                     >  2:1044454/1‑100 (MQ=255)
                                   gCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGc                                                                  <  2:2349076/100‑1 (MQ=255)
                                    ntGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCa                                                                 >  1:1073965/2‑100 (MQ=255)
                                     tGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCaa                                                                >  2:348367/1‑100 (MQ=255)
                                      ggCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAAt                                                               >  1:1000046/1‑100 (MQ=255)
                                      ggCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAAt                                                               <  1:1185681/100‑1 (MQ=255)
                                          gACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCatcaatt                                                           <  2:2969703/100‑7 (MQ=255)
                                          gACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGAt                                                           <  1:1697010/100‑1 (MQ=255)
                                              gggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCa                                                       >  2:169584/1‑100 (MQ=255)
                                              gggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCa                                                       >  2:1668331/1‑100 (MQ=255)
                                              gggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCa                                                       >  2:1141098/1‑100 (MQ=255)
                                              gggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAATGGCACATCTGGCAATTGATGCCa                                                       >  1:1883291/1‑100 (MQ=255)
                                               ggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCa                                                       >  1:1261775/1‑99 (MQ=255)
                                               ggAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCAt                                                      >  2:3180095/1‑100 (MQ=255)
                                                 aaGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCa                                                    <  2:2635557/100‑1 (MQ=255)
                                                  agagACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCaa                                                   >  2:1105489/1‑100 (MQ=255)
                                                   gagaCACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAAc                                                  <  1:1609895/100‑1 (MQ=255)
                                                      acacAGGGGTAATTTTACGCTGGCCTACAATTCTGTCCTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGaa                                               <  1:2421556/100‑1 (MQ=255)
                                                      acacAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGaa                                               >  1:3027658/1‑100 (MQ=255)
                                                       cacaGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAATGGCACATCTGGCAATTGATGCCATCAACGaaa                                              <  2:1883300/100‑1 (MQ=255)
                                                          actgacgtgttttatttggcctacaatgccagtacagaattGTAGGCCAAATAAAACACGTCAGTAGCACATCTGGCAATTGATGCCATCAACGAAAGa                                            >  1:2735794‑M2/42‑99 (MQ=255)
                                                          aGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGAt                                           <  2:2689656/100‑1 (MQ=255)
                                                           ggggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCCGTGGCACATCTGGCAATTGATGCCATCAACGAAAGAtt                                          <  1:2100451/100‑1 (MQ=255)
                                                            gggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGAttt                                         >  2:2646236/1‑100 (MQ=255)
                                                             ggTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTa                                        >  1:1213746/1‑100 (MQ=255)
                                                              gTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTaa                                       >  2:704069/1‑100 (MQ=255)
                                                               tAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAAt                                      <  1:2464535/100‑1 (MQ=255)
                                                               tAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAAt                                      <  1:2188147/100‑1 (MQ=255)
                                                                 aTTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTc                                    >  2:2383927/1‑100 (MQ=255)
                                                                  ttttACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCa                                   >  2:1352302/1‑100 (MQ=255)
                                                                    tttatttggcctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCAcc                                 >  2:905555‑M1/15‑100 (MQ=255)
                                                                       cGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCa                              >  1:2593002/1‑100 (MQ=255)
                                                                         cTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGa                            >  2:2198094/1‑100 (MQ=255)
                                                                           ggcctacaatgccagtacagaattGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGaaa                          >  2:2586605‑M2/25‑100 (MQ=255)
                                                                            gcctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAt                         <  2:906828‑M1/94‑1 (MQ=255)
                                                                            gcctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAt                         <  1:2417411‑M1/94‑1 (MQ=255)
                                                                            gcctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAt                         <  2:343617‑M1/94‑1 (MQ=255)
                                                                             cctacaatgccagtacagaattGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtc                        >  1:344292‑M2/23‑100 (MQ=255)
                                                                             cctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtc                        >  1:626546‑M1/6‑100 (MQ=255)
                                                                             cctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtc                        >  1:1877043‑M1/6‑100 (MQ=255)
                                                                             cctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtc                        >  2:3167544‑M1/6‑100 (MQ=255)
                                                                              ctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtct                       >  2:799777‑M1/5‑100 (MQ=255)
                                                                              ctacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtct                       <  2:3171502‑M1/96‑1 (MQ=255)
                                                                               tacAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAAtctc                      <  2:1493908‑M1/97‑1 (MQ=255)
                                                                                acAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATctct                     <  2:1343470‑M1/98‑1 (MQ=255)
                                                                                 cAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCtt                    <  1:2384642‑M1/99‑1 (MQ=255)
                                                                                  agTTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTc                   >  2:839462‑M1/3‑100 (MQ=255)
                                                                                  AATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTc                   >  2:2827018‑M1/1‑100 (MQ=255)
                                                                                   aTTCTGAACTGGCAATGTAGGCCAAATAAAAAACGTCTGTGGAACATCTGGGAAGTGATGTCATCAACGAAAGATTTATTTTAGCTGAGAAATCTCtttc                  >  1:2037136/1‑98 (MQ=255)
                                                                                   ATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTcc                  <  2:1771939‑M1/100‑1 (MQ=255)
                                                                                   ATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTcc                  <  2:1965682‑M1/100‑1 (MQ=255)
                                                                                   ATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTcc                  >  2:2584289‑M1/1‑100 (MQ=255)
                                                                                     tCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCaa                >  1:47350/1‑100 (MQ=255)
                                                                                        gTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGa             <  2:2742530/100‑1 (MQ=255)
                                                                                          aCTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGaca           <  1:2276517/100‑1 (MQ=255)
                                                                                             ggCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCt        >  1:2562321/1‑100 (MQ=255)
                                                                                             ggCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCt        >  2:882591/1‑100 (MQ=255)
                                                                                              gCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCtt       >  2:2111494/1‑100 (MQ=255)
                                                                                               cATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCTTc      <  1:3090878/100‑1 (MQ=255)
                                                                                                attGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCTTcc     <  2:2381298‑M2/97‑1 (MQ=255)
                                                                                                attGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACAACTTcc     >  1:3292675‑M2/4‑100 (MQ=255)
                                                                                                   |                                                                                                   
ATGGAGATGTCAGCAGCTGGGGCAACGCTATATACGCTGGCAGACTGGGAAGAGACACAGGGGTAATTTTACGCTGGCCTACAATTCTGTACTGGCATTGTAGGCCAAATAAAACACGTCAGTGGCACATCTGGCAATTGATGCCATCAACGAAAGATTTAATTCACCTCAGAAATCTCTTCCAACGACACCTTCCGCG  >  NC_000913/1852463‑1852661

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.