New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2282891 =NA (NA)6 (0.050) 5/164 NT NA noncoding (5/34 nt) REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences REP159 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 2282921 = NA (NA)intergenic (+120/+19) rplY/yejK 50S ribosomal subunit protein L25/spermidine nucleoid‑associated protein

Only 100 of 176 total aligned reads displayed.

ACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTTGC  >  NC_000913/2282823‑2283020
                                                                                                  |                                                                                                   
aCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                    <  2:1026852/100‑1 (MQ=255)
aCCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAt                                                                                                    <  2:1074431/100‑1 (MQ=255)
 ccgaatttgcgcgaccaattgcagcgccggacgtctggcggcaattaatcggttttgtgttctgaatGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  1:1905915‑M1/68‑100 (MQ=255)
 ccccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCAtt                                                                                                   >  1:3355335/1‑100 (MQ=255)
  cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                                                                                                  <  2:1924689/100‑1 (MQ=255)
  cccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTc                                                                                                  >  2:459140/1‑100 (MQ=255)
   gaatttgcgcgaccaattgcagcgccggacgtctggcggcaattaatcggttttgtgttctgaatGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                                                 >  1:2572499‑M1/66‑100 (MQ=255)
   ccGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCa                                                                                                 <  1:459138/100‑1 (MQ=255)
       tCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAac                                                                                             <  2:2637546/100‑1 (MQ=255)
        ccGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAaca                                                                                            >  2:1803174/1‑100 (MQ=255)
         cggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAacac                                                                                           >  2:1671784/1‑100 (MQ=255)
          ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                                                          <  1:1199917/100‑1 (MQ=255)
          ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                                                          <  2:144015/100‑1 (MQ=255)
          ggcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAAcaca                                                                                          >  2:3306900/1‑100 (MQ=255)
           gcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAacac                                                                                           <  1:3130148/98‑1 (MQ=255)
           gcggGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACaa                                                                                         >  1:438323/1‑100 (MQ=255)
              tggTTTTTGGTATCTGCAGATTATGTCTGATTACGGTATTGCTAGTTTTTGCAGGCCAGATAAGTCGTTCACGCCGCATCTGGCATTCAGAACACaaa                                                                                        <  1:3301784/97‑1 (MQ=38)
              gtgTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAAc                                                                                      <  1:1125170/98‑1 (MQ=255)
                gTTTTTTGTATCTGCAGATTATGCCTGATTACGGGATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCg                                                                                    >  2:2834718/1‑100 (MQ=255)
                 ttttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGa                                                                                   <  1:2231437/100‑1 (MQ=255)
                  tttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAt                                                                                  <  1:2899438/100‑1 (MQ=255)
                   ttttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGAtt                                                                                 <  1:3034029/100‑1 (MQ=255)
                    tttGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTa                                                                                >  2:1399554/1‑100 (MQ=255)
                           cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccg                                                                         >  2:1109525/1‑100 (MQ=255)
                           cTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccg                                                                         >  2:2175174/1‑100 (MQ=255)
                            tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgc                                                                        <  2:3406599/100‑1 (MQ=255)
                            tGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgc                                                                        >  1:241603/1‑100 (MQ=255)
                            ngCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgc                                                                        >  1:1073901/2‑100 (MQ=255)
                             gCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTgccgcc                                                                       >  1:192541/1‑100 (MQ=255)
                               aGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAg                                                                     <  2:2259434/100‑1 (MQ=255)
                                gATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGa                                                                    >  2:2343265/1‑100 (MQ=255)
                                  ttATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACg                                                                  <  1:3239747/100‑1 (MQ=255)
                                   tATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGt                                                                 >  2:3417174/1‑100 (MQ=255)
                                     tGCCTGATTACGGTATTGCTATTTTTTTTTTTTTTTTTAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCATACGTcc                                                               >  1:1611036/1‑100 (MQ=25)
                                     tGCCTGATTACGGTATTGCTATTTTTTGCATTCCTGCTAAGGCGTTCACGCCGCCTCTGGCATTCAGAACACCACACCGATTAATTGCCGCCAGACGTcc                                                               >  1:602109/1‑100 (MQ=255)
                                      gCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCg                                                              >  2:1050100/1‑100 (MQ=255)
                                       ccTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCgg                                                             >  2:1758927/1‑100 (MQ=255)
                                       ccTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCACTCAGACCCCAAAACCGCTTAACGGCCGCCAGACGTcc                                                               >  1:2736165/1‑98 (MQ=37)
                                             tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                       <  2:1343172/100‑1 (MQ=255)
                                             tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                       <  2:1299997/100‑1 (MQ=255)
                                             tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                       <  1:1018555/100‑1 (MQ=255)
                                             tACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGc                                                       >  1:3417782/1‑100 (MQ=255)
                                              aCGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCa                                                      >  2:2814332/1‑100 (MQ=255)
                                               cGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCaa                                                     >  1:983758/1‑100 (MQ=255)
                                               cGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCa                                                      >  1:404694/1‑99 (MQ=255)
                                                 gTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAAt                                                    >  1:206335/1‑99 (MQ=255)
                                                  tATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTg                                                  >  1:2964837/1‑100 (MQ=255)
                                                      gCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcg                                              <  1:712597/100‑1 (MQ=255)
                                                       cTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgc                                             >  2:799978/1‑100 (MQ=255)
                                                        tATTTTTTGCAGTCCAGATAAGTTGTTGACGCCGAATCTGGCATTCAGAACATAAAACCGATTAATTGCCTCCATACGTCCTGCGCTGCTATTGGTct                                              <  1:1461062/98‑2 (MQ=255)
                                                        tATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTcgcg                                            <  1:1233762/100‑1 (MQ=255)
                                                         aTTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCgcgc                                           <  1:2572052/100‑1 (MQ=255)
                                                         aTTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCgcgc                                           >  2:1765449/1‑100 (MQ=255)
                                                           tttttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaa                                         >  2:2748314/1‑100 (MQ=255)
                                                           tttttGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaa                                         >  2:2821505/1‑100 (MQ=255)
                                                           gttctgaatgccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCaa                                         >  1:1764229‑M2/40‑100 (MQ=255)
                                                               tGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTc                                     >  2:2653002/1‑100 (MQ=255)
                                                                gCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcg                                    <  1:829847/100‑1 (MQ=255)
                                                                gCAGGCCAGATAAGGCGTTCACGCCGCAACTGGCCTTCAGAACACAAAACCCATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTca                                    <  1:685645/100‑2 (MQ=255)
                                                                  atgccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                  >  2:1627841‑M2/33‑100 (MQ=255)
                                                                  atgccagatgcggcgtgaacgccttatctggcATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                  >  2:694674‑M2/33‑100 (MQ=255)
                                                                  aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                  >  1:1285637/1‑100 (MQ=255)
                                                                  aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                  <  2:1030684/100‑1 (MQ=255)
                                                                  aGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggc                                  >  1:2460345/1‑100 (MQ=255)
                                                                   ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcg                                 >  2:249218/1‑100 (MQ=255)
                                                                   ggCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTcggcg                                 >  1:349729/1‑100 (MQ=255)
                                                                    GCCAGATAAGGGGTTCACGCCGCATCGGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGGCCGGCGCTGCAATTGGTCGCGCAACTTcggcgg                                >  1:2312717‑M1/1‑100 (MQ=255)
                                                                      cctaTAAGGCGTTCACGCCGCAGCTGGCATTCAGCGGACAAAGCCGGTTAAGTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCggcggc                               <  1:2834701/96‑1 (MQ=37)
                                                                      CAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGgcggcg                              <  1:1038499‑M1/100‑1 (MQ=255)
                                                                      CAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGgcggcg                              >  1:2821488‑M1/1‑100 (MQ=255)
                                                                      CAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGgcggcg                              >  1:3280778‑M1/1‑100 (MQ=255)
                                                                       AGATAAGGCGTTCCCGCCGCATCTGGCATTCAGAACACTAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGgcggcg                              <  1:2107697‑M1/99‑1 (MQ=255)
                                                                          TAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGcc                          <  1:2503089‑M1/100‑1 (MQ=255)
                                                                            aGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCtt                        <  2:1611380/100‑1 (MQ=255)
                                                                            aGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCtt                        >  2:3143410/1‑100 (MQ=255)
                                                                            aGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCtt                        <  1:3080030/100‑1 (MQ=255)
                                                                            aGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCtn                        <  1:187425/100‑2 (MQ=255)
                                                                             ggCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCttt                       <  1:226091/100‑1 (MQ=255)
                                                                              gCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTa                      <  2:1876979/100‑1 (MQ=255)
                                                                               cGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCTGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCtt                        <  1:2103978/97‑1 (MQ=255)
                                                                               cGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTaa                     <  2:2078534/100‑1 (MQ=255)
                                                                                gTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAAt                    >  2:489264/1‑100 (MQ=255)
                                                                                 ttCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATg                   <  2:1285642/100‑1 (MQ=255)
                                                                                   cACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGt                 <  1:1380218/100‑1 (MQ=255)
                                                                                   cACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGt                 >  1:777909/1‑100 (MQ=255)
                                                                                   cACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCAGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATgg                  >  2:2240416/1‑99 (MQ=255)
                                                                                    aCGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGTCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTc                >  2:2001562/1‑100 (MQ=255)
                                                                                    aCGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTc                <  1:2152093/100‑1 (MQ=255)
                                                                                     cgccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCa               >  2:114343/1‑100 (MQ=255)
                                                                                      gccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCaa              >  1:2607564/1‑100 (MQ=255)
                                                                                      gccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCaa              <  1:888217/100‑1 (MQ=255)
                                                                                      gccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCaa              >  2:573723/1‑100 (MQ=255)
                                                                                       ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg             >  1:522479/1‑100 (MQ=255)
                                                                                       ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg             <  1:2590937/100‑1 (MQ=255)
                                                                                       ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg             <  2:2265071/100‑1 (MQ=255)
                                                                                       ccgcATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAg             <  2:2964853/100‑1 (MQ=255)
                                                                                           atctggcATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTAt         >  2:1592883‑M2/8‑100 (MQ=255)
                                                                                              tggaATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTa          >  1:1689047‑M2/5‑96 (MQ=255)
                                                                                               ggcATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGt     >  2:327474‑M2/4‑100 (MQ=255)
                                                                                               ggcATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGt     >  2:1566797‑M2/4‑100 (MQ=255)
                                                                                                  |                                                                                                   
ACCCCGCTCCGGCGGGGTTTTTTGTATCTGCAGATTATGCCTGATTACGGTATTGCTATTTTTTGCAGGCCAGATAAGGCGTTCACGCCGCATCTGGCATTCAGAACACAAAACCGATTAATTGCCGCCAGACGTCCGGCGCTGCAATTGGTCGCGCAAATTCGGCGGCGTGCCTTTAATGGTCAAGGTATCGGTTGC  >  NC_000913/2282823‑2283020

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.