BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3238525	115 (0.930)	20 (0.180)	13/162	NT	15.2%	intergenic (+228/‑55)	ygjR/alx	putative NAD(P)‑dependent dehydrogenase/putative membrane‑bound redox modulator
*	?	NC_000913	= 3238557	119 (1.060)	20 (0.180)	13/162	NT	15.2%	intergenic (+260/‑23)	ygjR/alx	putative NAD(P)‑dependent dehydrogenase/putative membrane‑bound redox modulator

Only 100 of 158 total aligned reads displayed.

CGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTG  >  NC_000913/3238461‑3238654

cGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTttt                                                                                                <  2:373987‑M2/100‑4 (MQ=255)

cGCAGACGTATTCCTTGTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTttt                                                                                                >  2:2197812‑M2/1‑97 (MQ=255)

  cAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTttttt                                                                                              <  2:1242948‑M2/100‑6 (MQ=255)

     aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatg                                                                                           >  1:3262617‑M2/1‑92 (MQ=255)

     aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatg                                                                                           >  1:1242944‑M2/1‑92 (MQ=255)

     aCGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatg                                                                                           >  1:247879‑M2/1‑92 (MQ=255)

      cGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTttttatgtg                                                                                          >  1:983808‑M2/1‑91 (MQ=255)

       gTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                                                         <  2:2864582/100‑1 (MQ=255)

       gTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                                                         <  2:2282221/100‑1 (MQ=255)

       gTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTAtgtg                                                                                         <  2:1180424/100‑1 (MQ=255)

             cTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGa                                                                                   >  1:2684183/1‑100 (MQ=255)

               tttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAAc                                                                                 >  1:959413/1‑100 (MQ=255)

                ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACt                                                                                <  2:1099549/100‑1 (MQ=255)

                ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACt                                                                                >  1:1947515/1‑100 (MQ=255)

                ttttGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACt                                                                                <  2:1099570/100‑1 (MQ=255)

                   tattgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCt                                                                             <  2:1767868/98‑1 (MQ=255)

                    gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTa                                                                            <  1:3088060/100‑1 (MQ=255)

                    gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTa                                                                            >  1:3050959/1‑100 (MQ=255)

                    gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTa                                                                            >  2:1454342/1‑100 (MQ=255)

                    gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTa                                                                            <  2:2524527/100‑1 (MQ=255)

                    gttgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTa                                                                            <  2:330246/100‑1 (MQ=255)

                      tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg                                                                          >  2:1358424/1‑100 (MQ=255)

                      tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg                                                                          >  2:2424489/1‑100 (MQ=255)

                      tgtAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATg                                                                          >  1:1216883/1‑100 (MQ=255)

                        tAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGaa                                                                        >  1:2674362/1‑100 (MQ=255)

                         aaGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAAt                                                                       >  1:1782721/1‑100 (MQ=255)

                          aGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa                                                                      >  1:609821/1‑100 (MQ=255)

                          aGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATa                                                                      <  2:950998/100‑1 (MQ=255)

                           gTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc                                                                     <  1:1004783/100‑1 (MQ=255)

                           gTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc                                                                     <  1:1300339/100‑1 (MQ=255)

                           gTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATAc                                                                     >  2:1261426/1‑100 (MQ=255)

                              agaCCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGt                                                                  <  2:2976071/100‑1 (MQ=255)

                                  cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCggn                                                              <  1:3247757/100‑2 (MQ=255)

                                  cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCTGc                                                              >  1:111437/1‑100 (MQ=255)

                                  cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc                                                              <  1:1671354/100‑1 (MQ=255)

                                  cTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGc                                                              >  2:279958/1‑100 (MQ=255)

                                    tGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCAc                                                            >  2:2261188/1‑100 (MQ=255)

                                     gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagacctcgccttccggcaaggtctcactt                                                           <  1:975665‑M2/100‑41 (MQ=255)

                                     gCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACg                                                           >  2:2827310/1‑100 (MQ=255)

                                      ccGGCAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCGTCCGCCGTTGGCCGTTTCTTTCTGCGCAACGCACTTCTATGCATAATggc                                                                 >  1:2721895/1‑91 (MQ=255)

                                      ccGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGc                                                          >  2:3097225/1‑100 (MQ=255)

                                         gAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGt                                                       >  1:1127111/1‑100 (MQ=255)

                                            ggCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc                                                    <  2:1870604/100‑1 (MQ=255)

                                            ggCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGc                                                    >  2:441226/1‑100 (MQ=255)

                                             gCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt                                                   >  1:1006777/1‑100 (MQ=255)

                                              cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTa                                                  >  1:862688/1‑100 (MQ=255)

                                              cGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACATTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCt                                                   >  2:2217232/1‑99 (MQ=255)

                                               gAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTAt                                                 <  1:2470657/100‑1 (MQ=255)

                                                 ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGCATACTGTCGGCACGCCGTTGCTATgg                                               >  1:694035/1‑100 (MQ=255)

                                                 ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgg                                               >  2:1580233/1‑100 (MQ=255)

                                                 ggTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGCTgctttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaa                                               <  2:3380568‑M2/100‑53 (MQ=255)

                                                  gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaaagg                                              <  2:3324069‑M2/100‑54 (MQ=255)

                                                  gTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATggg                                              <  1:2298785/100‑1 (MQ=255)

                                                   tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaaagga                                             <  2:3150485‑M2/100‑55 (MQ=255)

                                                   tCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATgggg                                             <  2:2263024/100‑1 (MQ=255)

                                                     tATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCg                                           <  2:3215765/100‑1 (MQ=255)

                                                     tATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCg                                           <  2:59930/100‑1 (MQ=255)

                                                      aTGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagaccttgccttccggcaaggtctcacttacaacaaaaaaggaata                                          <  2:2729561‑M2/100‑58 (MQ=255)

                                                       tgaaTAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa                                         <  2:2562085/97‑1 (MQ=255)

                                                       tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa                                         <  2:1117264/100‑1 (MQ=255)

                                                       tGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGa                                         >  2:2137990/1‑100 (MQ=255)

                                                        gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaaaggaatacg                                        <  2:1855729‑M2/100‑60 (MQ=255)

                                                        gCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAt                                        <  2:2118778/100‑1 (MQ=255)

                                                         cATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaaaggaatacgt                                       <  1:595467‑M2/100‑61 (MQ=255)

                                                         cATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTtttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaaaggaatacgt                                       <  2:3098685‑M2/100‑61 (MQ=255)

                                                         cATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGAtt                                       >  2:1407649/1‑100 (MQ=255)

                                                         cATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGCTtttttatgcatagacctcgccttccggcaaggtctcacttacaacaaaaaaggaatacgt                                       <  1:479526‑M2/100‑61 (MQ=255)

                                                           tAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg                                     >  1:553995/1‑100 (MQ=255)

                                                             aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt                                   <  2:702991/100‑1 (MQ=255)

                                                             aaaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCt                                   <  2:266954/100‑1 (MQ=255)

                                                             aaaaGCAGCGGCTGACGTCGTCCGACGTTGGCGGTTTTTTCATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCg                                     <  2:2328841/98‑1 (MQ=255)

                                                              aaaGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtg                                  <  1:1314267/100‑1 (MQ=255)

                                                                 gcagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttg                               <  2:3114963/100‑1 (MQ=255)

                                                                  cagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgt                              >  2:192085/1‑100 (MQ=255)

                                                                  cagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgt                              >  2:2962381/1‑100 (MQ=255)

                                                                  cagcGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCtgttgt                              >  1:1297158/1‑100 (MQ=255)

                                                                         tGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGcc                       <  2:1312678/100‑1 (MQ=255)

                                                                         tGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGcc                       <  2:1650138/100‑1 (MQ=255)

                                                                         tGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGcc                       <  2:1650041/100‑1 (MQ=255)

                                                                          gACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCa                      >  1:672340/1‑100 (MQ=255)

                                                                            cGTCTTCCGACGTTGGCCGTTTTTTTATGTGTTAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAt                     <  1:216209/99‑1 (MQ=255)

                                                                            cGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCAtt                    <  2:1194597/100‑1 (MQ=255)

                                                                             gacggaagACGTTCGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTa                   >  2:2303224/8‑100 (MQ=255)

                                                                                ttCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGc                <  1:569655/100‑1 (MQ=255)

                                                                                  ccGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGATGTCGCCATTATGCTg              >  2:40940/1‑100 (MQ=255)

                                                                                    gACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGc            <  1:134453/100‑1 (MQ=255)

                                                                                     aCGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGGTGTTGTTGTCGCCATTATGCTGGCt           >  1:126258/1‑100 (MQ=255)

                                                                                       nttGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGATGTTGTTGTCGCCATTATGCTGGCt           >  1:2753533/2‑98 (MQ=255)

                                                                                        ttGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATc        <  2:1799528/100‑1 (MQ=255)

                                                                                        ttGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATc        <  1:2962365/100‑1 (MQ=255)

                                                                                        ttGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATc        >  1:169552/1‑100 (MQ=255)

                                                                                          ggCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCTGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa      <  1:1837134/100‑1 (MQ=255)

                                                                                          ggCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTTGCTATCg       >  1:1657248/1‑99 (MQ=255)

                                                                                          ggCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa      >  2:678555/1‑100 (MQ=255)

                                                                                          ggCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGa      <  2:2071993/100‑1 (MQ=255)

                                                                                           gCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc     >  1:769832/1‑100 (MQ=255)

                                                                                           gCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAc     >  1:395267/1‑100 (MQ=255)

                                                                                            ccGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGAcc    <  1:3112833/100‑1 (MQ=255)

                                                                                              gTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCtg  <  2:2352884/100‑1 (MQ=255)

                                                                                                ttttttATGTGTAAGGAACTTCTATGAATACTGTCGTCACGCCGTTGCTATCGGGCGGACTCGTTGTTGTTGTCGCCATTATGCTGGCTATCGAcc    >  1:304484/1‑96 (MQ=255)

CGCAGACGTATTCCTTTTTTGTTGTAAGTGAGACCTTGCCGGAAGGCGAGGTCTATGCATAAAAAGCAGCGGCTGACGTCTTCCGACGTTGGCCGTTTTTTTATGTGTAAGGAACTTCTATGAATACTGTCGGCACGCCGTTGCTATGGGGCGGATTCGCTGTTGTTGTCGCCATTATGCTGGCTATCGACCTG  >  NC_000913/3238461‑3238654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.