BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3255175 =	NA (NA)	5 (0.040)	4/168	NT	NA	coding (133/165 nt)	yhaL	uncharacterized protein
*	?	NC_000913	3255206 =	NA (NA)	5 (0.040)	4/168	NT	NA	coding (164/165 nt)	yhaL	uncharacterized protein

Only 100 of 173 total aligned reads displayed.

GCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCC  >  NC_000913/3255107‑3255304

tcatagCCAAAATTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTa                                                                                                    >  1:112087/6‑100 (MQ=255)

gCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTa                                                                                                    <  2:1270156/100‑1 (MQ=255)

 catagCCAAAATTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTa                                                                                                    >  2:2179012/5‑99 (MQ=255)

  tcgttaatgttgttggattttgtaggccggataaggcgttttcgccgcatccggcaacctgtctttACGCGTTTAGCCGAGGATGAAGCTACCGCGTaaa                                                                                                  >  2:2255095‑M1/67‑100 (MQ=255)

   ccGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTaa                                                                                                   <  1:2731133/98‑1 (MQ=255)

    cGCCTAAAATTTTGGCTATGAATAGATGGTGAGCGAGCTGGAAGCTATCGTCGCGGATGCGGAAACGCGTGTAGCCAAGGATGAAGCTACCGCGTaa                                                                                                   <  1:1462074/97‑1 (MQ=255)

    cGCCAAAAATTTTGGATATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGACACGCGGTTAGCCGAGGATGAAGCTACCGCGTAAAg                                                                                                 >  1:2574517/1‑99 (MQ=255)

      taatgttgttggattttgtaggccggataaggcggtttcgccgcatccggcaacctgtctttACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACa                                                                                              >  1:2698364‑M1/63‑100 (MQ=255)

       cAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAg                                                                                             >  2:1776501/1‑100 (MQ=255)

       cAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAg                                                                                             >  1:1557712/1‑100 (MQ=255)

        aaaaaTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAgg                                                                                            <  1:759043/100‑1 (MQ=255)

        aaaaaTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAgg                                                                                            >  2:1569367/1‑100 (MQ=255)

        aaaaaTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAgg                                                                                            >  2:379356/1‑100 (MQ=255)

        aaaaaTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAgg                                                                                            <  2:2500792/100‑1 (MQ=255)

         aaaaTTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGt                                                                                           >  2:2852381/1‑100 (MQ=255)

              tttGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCg                                                                                      <  1:528519/100‑1 (MQ=255)

              tttGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCg                                                                                      <  2:2595406/100‑1 (MQ=255)

                   cTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgc                                                                                 <  2:1887660/100‑1 (MQ=255)

                   cTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTACCGGAt                                                                                   >  1:203303/1‑98 (MQ=255)

                    tATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcg                                                                                >  1:378010/1‑100 (MQ=255)

                      tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                                              >  2:3044263/1‑100 (MQ=255)

                      tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                                              <  1:2866853/100‑1 (MQ=255)

                      tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATgcggc                                                                              <  2:2672119/100‑1 (MQ=255)

                      tGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCAGGATgcggc                                                                              >  1:2744865/1‑100 (MQ=255)

                         agagATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGaa                                                                           <  1:1595064/100‑1 (MQ=255)

                             aTGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACg                                                                       <  2:1113026/100‑1 (MQ=255)

                             aTGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACg                                                                       >  2:930265/1‑100 (MQ=255)

                              tGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGc                                                                      >  1:262852/1‑100 (MQ=255)

                              tGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGc                                                                      >  1:2712621/1‑100 (MQ=255)

                               gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGGAAACGcc                                                                     <  2:1798422/100‑1 (MQ=255)

                               gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                                                     <  2:2093335/100‑1 (MQ=255)

                               gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                                                     <  2:1727926/100‑1 (MQ=255)

                               gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                                                     >  1:1681691/1‑100 (MQ=255)

                               gTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCAGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGcc                                                                     >  2:3229871/1‑100 (MQ=255)

                                     cgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATcc                                                               >  1:1194889/1‑100 (MQ=255)

                                     cgagcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATcc                                                               >  1:2361665/1‑100 (MQ=255)

                                       agcTGGAAGCTATCGTCGCGGATGCTGAAATGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCgg                                                             <  2:425382/100‑1 (MQ=255)

                                       agcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCgg                                                             <  2:298082/100‑1 (MQ=255)

                                        gcTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGc                                                            <  2:1296382/100‑1 (MQ=255)

                                         cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGGAAACGCCTTATCCGGcc                                                           >  2:2390001/1‑100 (MQ=255)

                                         cTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGcc                                                           <  2:2900707/100‑1 (MQ=255)

                                          tGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCt                                                          >  1:1624611/1‑100 (MQ=255)

                                           ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCTGGATGCGGCGAAAACGCCTTATGCGGccca                                                         >  2:1347480/1‑98 (MQ=255)

                                           ggAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTa                                                         >  2:1375016/1‑100 (MQ=255)

                                             aaGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACa                                                       >  1:670993/1‑100 (MQ=255)

                                               gCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACaaa                                                     >  2:157510/1‑100 (MQ=255)

                                                    cgtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCca                                                <  2:1624618/100‑1 (MQ=255)

                                                     gtcgCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaa                                               <  2:2576415/100‑1 (MQ=255)

                                                       cgcgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCcaaca                                             >  1:2192274/1‑100 (MQ=255)

                                                        gcgGAGGCTGAGACGCGTTTAGCCGAGGATGGAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATGCGGCCTACAAAATCcaaca                                             <  1:3020438/99‑1 (MQ=38)

                                                         cgGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCaacaac                                           <  2:118890/100‑1 (MQ=255)

                                                             tGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTa                                       <  1:554600/100‑1 (MQ=255)

                                                              gtctttacgcggtagcttcatcctcggctaaacgcgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTaa                                      >  2:772584‑M2/38‑100 (MQ=255)

                                                              gCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTaa                                      >  1:441805/1‑100 (MQ=255)

                                                               tctttacgcggtagcttcatcctcggctaaacgcgtAGAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAGCATTAAc                                     >  1:1834766‑M2/37‑100 (MQ=255)

                                                               cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                     >  2:1448704/1‑100 (MQ=255)

                                                               cTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAAc                                     >  1:1148836/1‑100 (MQ=255)

                                                                tGAAACGCGTTTAGCCGAGTATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                    <  2:790418/100‑1 (MQ=255)

                                                                tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                    >  2:805795/1‑100 (MQ=255)

                                                                tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                    <  1:1569360/100‑1 (MQ=255)

                                                                tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                    <  1:1568978/100‑1 (MQ=255)

                                                                tGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACg                                    <  2:711351/100‑1 (MQ=255)

                                                                 tttacgcggtagcttcatcctcggctaaacgcgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGa                                   >  1:1601140‑M2/35‑100 (MQ=255)

                                                                 gAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGa                                   >  1:844737/1‑100 (MQ=255)

                                                                  aaaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTGTCCGGCCTACAAAATCCAACAACATTAACGaa                                  >  1:2213124/1‑100 (MQ=255)

                                                                  aaaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGaa                                  <  1:2259901/100‑1 (MQ=255)

                                                                   aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGCCAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt                                 <  1:1572908/100‑1 (MQ=255)

                                                                   aaCGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAAt                                 >  2:1682483/1‑100 (MQ=255)

                                                                     CGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTa                               <  2:765612‑M1/100‑1 (MQ=255)

                                                                      gcgTTTAGCCGAGGATGAACCTACCGCGTAAAGACAGGTTGCCGGATGAGGCAAAAACGACTTATCCGGCCTACAAACCACAACAAAATTACCGAATTaa                              <  1:1137659/100‑1 (MQ=37)

                                                                       CGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTaaa                             >  1:2354228‑M1/1‑100 (MQ=255)

                                                                        GTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAAc                            >  2:1242824‑M1/1‑100 (MQ=255)

                                                                        GTTTAGCCGAGGATGAAGCTACCGCGAAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAAc                            <  2:2086229‑M1/100‑1 (MQ=255)

                                                                         tttAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAaaca                           <  1:1190324/100‑1 (MQ=255)

                                                                            aGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAcc                        <  2:1048202/100‑1 (MQ=255)

                                                                             gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                       >  2:3087079/1‑100 (MQ=255)

                                                                             gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAccc                       <  1:2852364/100‑1 (MQ=255)

                                                                             gCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAAcc                        >  1:1639228/1‑99 (MQ=255)

                                                                              ccGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCg                      >  1:359174/1‑100 (MQ=255)

                                                                               cggggATGAAGCGACCGCGAAAAGACAGGTGGCCGGATCAGGCGAAAACGCCTGAGCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGt                     <  1:271665/97‑1 (MQ=255)

                                                                                 aGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAg                   >  1:736744/1‑100 (MQ=255)

                                                                                  ggATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAgg                  <  2:69713/100‑1 (MQ=255)

                                                                                   gATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGc                 <  1:240873/100‑1 (MQ=255)

                                                                                     tGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCg               >  2:2288623/1‑100 (MQ=255)

                                                                                      gAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCgg              <  2:3136934/100‑1 (MQ=255)

                                                                                        aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGan            <  2:2053277/100‑2 (MQ=255)

                                                                                        aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc            <  2:670995/100‑1 (MQ=255)

                                                                                        aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGAc            <  2:2978459/100‑1 (MQ=255)

                                                                                        aGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACAGTAACGAATTAAACAACCCGTAGGCCGGAc            >  2:716881/1‑100 (MQ=255)

                                                                                        aGCTACCGCCTAAAGACACGTTGCCGGATGCGACGAAAACGCCGTATCCGGCAAACCAAACCCCACAACATAAACGAATTAAACAACCCGTAAGCCGGAc            >  1:932179/1‑100 (MQ=25)

                                                                                         gCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACa           <  2:270332/100‑1 (MQ=255)

                                                                                          cTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACaa          <  1:518158/100‑1 (MQ=255)

                                                                                          cTACCGCGTAAAGACAGGTCGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACaa          >  1:2897910/1‑100 (MQ=255)

                                                                                           tACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAg         >  2:147295/1‑100 (MQ=255)

                                                                                            aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa        >  2:3329327/1‑100 (MQ=255)

                                                                                            aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa        >  2:50745/1‑100 (MQ=255)

                                                                                            aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa        <  2:1557719/100‑1 (MQ=255)

                                                                                            aCCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGa        >  1:2491227/1‑100 (MQ=255)

                                                                                                cgtAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATgcg    >  1:173792‑M2/4‑100 (MQ=255)

                                                                                                  tAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGcc  <  1:2291834‑M2/99‑1 (MQ=255)

GCACCGCCAAAAATTTTGGCTATGAAGAGATGTTGAGCGAGCTGGAAGCTATCGTCGCGGATGCTGAAACGCGTTTAGCCGAGGATGAAGCTACCGCGTAAAGACAGGTTGCCGGATGCGGCGAAAACGCCTTATCCGGCCTACAAAATCCAACAACATTAACGAATTAAACAACCCGTAGGCCGGACAAGATGCGCC  >  NC_000913/3255107‑3255304

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.