| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1159325 = | 164 (1.170) | 7 (0.060) | 7/178 | 18.7 | 4.7% | intergenic (+23/+37) | ptsG/fhuE | fused glucose‑specific PTS enzymes: IIB component/IIC component/ferric‑rhodotorulic acid outer membrane transporter |
| ? | NC_000913 | 1159347 = | 137 (1.090) | intergenic (+45/+15) | ptsG/fhuE | fused glucose‑specific PTS enzymes: IIB component/IIC component/ferric‑rhodotorulic acid outer membrane transporter | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
CCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1159432‑1159325‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgccttTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT > NC_000913/1159347‑1159444 CCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTG > 2:3241645/1‑100CCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTG > 2:11840/1‑100CCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTG > 1:590538/1‑100CCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTG > 1:3430036/1‑100 CAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGG > 2:3169263/1‑100 CAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGG < 2:1747752/100‑1 CAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGG > 2:1339934/1‑100 AACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGC < 1:3477347/100‑1 AACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGC > 2:42027/1‑100 AACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGC > 1:2024586/1‑100 ACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGC < 1:469923/99‑1 CGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTG < 1:1387409/100‑1 GTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGC > 1:256945/1‑100 TGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCC > 1:3460282/1‑100 TGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCC < 2:1101496/100‑1 GGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCT > 2:1811424/1‑100 GGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCT > 2:1272650/1‑100 AGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTT > 1:488221/1‑98 CCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTG > 2:1917933/1‑100 ATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTG > 2:1009345/1‑100 ACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATT > 2:79221/1‑100 CCTGTAAAAAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGAT < 1:1009341/100‑1 TGTAAAAAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGACGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAG > 1:217954/1‑100 GTAAAAAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGA > 2:71358/1‑100 AAAGGCAGCCATCTGGCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTT > 1:2007506/1‑100 GCTGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGT < 2:949820/100‑1 TGCCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAG > 2:693036/1‑100 CCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGT > 2:979951/1‑100 CCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGT > 1:1378150/1‑100 CCTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGG > 2:2957593/1‑99 CTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTT > 2:1585587/1‑100 CTTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGT > 2:2476301/1‑99 TTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT > 2:2456816/1‑100 TTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT > 2:486779/1‑100 TTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT > 2:2406412/1‑100 TTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT < 2:1733655/100‑1 TTTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT > 1:864531/1‑100 CCAACGTGGAAGGTTCTATCGTCTACGGCACACCGCGTAATTTCAGCATTACCGGCACGTATCAATTCTGAATAACACCTGTAAAAAAGGCAGCCATCTGGCTGCCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1159432‑1159325‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggctgccttTTTTACAGGTGTTATTCAGAATTGATACGTGCCGGTAATGCTGAAATTACGCGGTGTGCCGTAGACGATAGAACCTTCCACGTTGGTATCGTAGGTTT > NC_000913/1159347‑1159444 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |