New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)36 (0.270) 18/170 NT NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon

Only 100 of 122 total aligned reads displayed.

TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225896‑225998
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  NC_000913/226015‑225917
                                                                                                                                                                                                           
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                        >  2:881566/1‑100
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                        <  2:3034342/100‑1
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CC                                                                                                        <  2:3615539/100‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       >  2:2535143/1‑100
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       <  1:1117884/100‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       >  2:1870253/1‑100
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       >  2:158108/1‑100
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       <  1:512954/100‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       <  2:3730599/100‑1
 TCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCC                                                                                                       <  2:728430/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGCACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      >  1:3728137/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      >  2:2896358/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      >  1:1884987/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      <  1:845723/100‑1
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      >  1:749992/1‑100
  CGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      <  1:445105/100‑1
   tctACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  1:2359562/97‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAATAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  1:2239138/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:873707/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:2861509/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:2985608/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:2185971/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  1:123614/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     >  2:3008304/1‑100
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:1523646/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:1250813/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  1:648896/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:875085/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  2:872875/100‑1
   GACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  1:1474152/100‑1
    ACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAATCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCC                                                                                                      <  1:347523/98‑1
    ACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTCCCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     <  1:3776360/99‑1
    ACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     >  1:1088646/1‑99
    ACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     >  1:3538138/1‑99
     CACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGT                                                                                                   >  2:2113461/1‑100
         CTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC                                                                                                     >  1:585471/1‑94
           ATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGGACTGAAACATCTAAGTACCCCGACGAAAAGAAATCAACCGAAATT‑CCC                                                                                                       >  1:2398131/1‑90
              ATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTTCGCTCGC                                                                                           >  2:1509299/1‑100
                       agCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGG                                                                                 <  1:478332/98‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGG                                                                                 <  1:1161826/100‑1
                       ATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGG                                                                                 <  1:1009176/100‑1
                         CCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGG                                                                               <  2:1227885/100‑1
                         CCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGG                                                                               <  1:1899276/100‑1
                          CATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGTAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGA                                                                              <  1:3235734/100‑1
                          CATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGA                                                                              <  2:1038446/100‑1
                          CATAGGTTAATGAGGCGAACCGGGCGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGA                                                                              <  1:1912282/100‑1
                            TAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAACTCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAAT                                                                            <  1:838541/100‑1
                            TAGGGTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTGCCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAAT                                                                            <  1:1435794/100‑1
                              GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTTCGCTCGCCGCTACTGGGGGAATC                                                                           <  2:3210889/100‑1
                              GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCT                                                                          <  2:2635647/100‑1
                               GTTAATTAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTTCGCTCGCCGCTACTGGGGGAATC                                                                           <  2:3214672/99‑1
                               GTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTTCGCTCGCCGCTACTGGGGGAATCT                                                                          <  2:2575569/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGTAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCGCGCCGCTACTGGGGGAATCTCGn                                                                       <  1:1314625/100‑2
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  2:3493356/100‑1
                                 TAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  1:394010/100‑1
                                  AATGAGGCGAACCGGTGGAACTTAAACATCTAAGCGCCCCGAGCAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  1:3021777/100‑1
                                  AATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  1:3021305/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  2:151916/100‑1
                                   ATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTT                                                                     <  2:2079920/100‑1
                                     GAGGCGAACCTGGGGAACTGCATCATCTAAGGACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCGCGTTCGCTCGCCGCTACTGGGGGAATCTCGGT                                                                      <  2:3840565/97‑1
                                     GAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGA                                                                   <  2:1767788/100‑1
                                     GAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGAT                                                                  <  2:3293257/100‑1
                                               gcGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑TCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCC                                                         <  1:2406105/98‑1
                                               GGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTC                                                          <  2:775134/100‑1
                                                               CTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATG                                         <  2:1685834/100‑1
                                                                  AGTACCCCGAGGAAAAGAAATCAACCGAGATT‑‑CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTC                                     <  1:2907087/100‑1
                                                                      CCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAG                                   <  1:1509286/100‑1
                                                                          GAGGAAAAGAAATCAACCGAGATT‑CCCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCC                              <  2:3641050/100‑1
                                                                                              tcttttcctCGTTCTCTCGCCTCTACTTGGTGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACC           <  2:2245544/91‑1
                                                                                                  ctcgCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  1:3728843/96‑1
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTtcctc     <  1:1389722/100‑6
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:2985977/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:467878/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:1032000/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:2912396/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:3767100/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:1976855/100‑1
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:2007025/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:2288197/100‑1
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:2633921/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  1:1813967/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     >  2:1568216/1‑100
                                                                                                    CCCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGCGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCAGTAACCTATG       <  1:1640749/98‑1
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  1:1849820/1‑100
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  2:70150/100‑1
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  1:234535/1‑100
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    <  2:2619241/100‑1
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGAT    >  2:2732757/1‑100
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:3608809/99‑1
                                                                                                     CCCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  1:1640373/97‑1
                                                                                                      CCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTATTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   <  2:2224523/100‑1
                                                                                                      CCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTATTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATG       <  1:2509166/96‑1
                                                                                                      CCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   <  2:694562/100‑1
                                                                                                      CCGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATT   >  2:1058776/1‑100
                                                                                                      CCGTTCGCTCGCCGCTACTGGGGGAACCTCGGTTGATTTCTCTTCCTCGCGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGA     <  1:3667828/98‑1
                                                                                                       CGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  >  2:285420/1‑100
                                                                                                       CGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  1:1903357/100‑1
                                                                                                       CGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  >  2:3178481/1‑100
                                                                                                       CGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  >  2:1859378/1‑100
                                                                                                       CGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCACCTCATTAACCTATGGATTC  <  1:105196/100‑1
                                                                                                                                                                                                           
TTCGACACACTATCATTAACTGAATCCATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATT‑CCCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/225896‑225998
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccccGTTCGCTCGCCGCTACTGGGGGAATCTCGGTTGATTTCTTTTCCTCGGGGTACTTAGATGTTTCAGTTCCCCCGGTTCGCCTCATTAACCTATGGATTC  <  NC_000913/226015‑225917

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.