| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4580042 | 122 (0.880) | 10 (0.080) | 9/164 | NT | 7.9% | intergenic (‑202/+26) | symE/hsdS | toxic peptide regulated by antisense sRNA symR/specificity determinant for hsdM and hsdR |
| ? | NC_000913 | = 4580047 | 120 (0.940) | intergenic (‑207/+21) | symE/hsdS | toxic peptide regulated by antisense sRNA symR/specificity determinant for hsdM and hsdR | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
ATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4579937‑4580042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaccTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGA < NC_000913/4580047‑4579949 ATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAG < 2:2955048/100‑1ATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAG < 1:1927545/100‑1ATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAG < 2:638903/100‑1 TATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATATATGTGGGTTATGATTGGCGTGAAATAATAAAAAGC > 1:1513343/1‑100 ATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCG < 2:1966018/100‑1 TGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGC > 2:438948/1‑100 TGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGC < 1:770272/100‑1 TGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGC < 1:658933/100‑1 GGGGTAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCA > 2:2364084/1‑100 GGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCA > 2:947550/1‑100 GGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCA > 2:1359179/1‑100 GGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCA > 1:438971/1‑100 GGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGAGCA > 1:3696408/1‑100 GGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATATATGTGGGTTATGATTGTCGTGAAATAATAAAAAGCGCAC > 1:316534/1‑100 GGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACC > 2:564568/1‑100 GGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACC < 1:605220/100‑1 GAAAGTCCAGCTAAAAAGAGAATAAAATGGGAAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACC < 1:3723453/99‑1 GTCAAGCTAAAAATAGAATAAAATGGGAAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATCATAAAAAGCGCACagga > 1:1553826/1‑94 CAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGT < 1:1081057/100‑1 AAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGTGCGCT < 1:1714598/100‑1 AAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGTGCGCT < 1:486770/100‑1 AAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGTGCGCTT < 1:2609428/99‑1 AATAGAATAAAATGGGTAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGTGCGCTTTT < 1:1673027/100‑1 GAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGTGCGCTTTTTATT < 2:2014296/100‑1 ATAATATGGGGAATTTCTGGAATGATTTAAAGATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACCTTTCCGGTGCGCTTTTTATTAT < 1:2465627/100‑1 GCGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCC > 1:2128350/1‑100 CGTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCA > 1:460168/1‑100 GTGAAATAATAAAAAGCGCACCGGAAAGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCAT > 1:3170446/1‑100 GCGCACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTA > 2:3325468/1‑100 CGCACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAG > 1:725744/1‑100 GCACCTTTCCGGTGCGCTTTTTATTATTTCCCGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGC < 1:21826/100‑1 GCACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGn < 2:760835/100‑2 GCACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGC > 1:3150588/1‑100 GCACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGC < 2:1693754/100‑1 GCACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGC < 2:3167449/100‑1 CACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCT < 2:1037911/100‑1 CACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCT > 2:1570810/1‑100 CACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCT < 1:3146623/100‑1 ACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTG < 1:521078/100‑1 ACCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTG < 1:1091347/100‑1 CCTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGG < 2:1029727/100‑1 CTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGA < 1:604311/100‑1 CTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGA < 1:426694/100‑1 CTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGA < 1:3560017/100‑1 CTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGA < 2:855367/100‑1 ATATGGGGAAAGTCCAGCTAAAAATAGAATAAAATGGGCAATTTCTGGAATGATTTAAATATATTTATGTGGGTTATGATTGGCGTGAAATAATAAAAAGCGCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4579937‑4580042‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgcaccTTTCCGGTGCGCTTTTTATTATTTCACGCCAATCATAACCCACATAAATATATTTAAATCATTCCAGAAATTGCCCATTTTATTCTATTTTTAGCTGGA < NC_000913/4580047‑4579949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |