New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 20668320 (0.000)26 (0.210) 11/160 NT 100% noncoding (522/1195 nt) IS5 repeat region
?NC_000913 = 2066857 NA (NA)noncoding (497/1195 nt) IS5 repeat region

Only 100 of 173 total aligned reads displayed.

CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931
                                                                                                   |                                                                                                   
cATCGGCACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:3575337‑M1/100‑1 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:2892930‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:2489919‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:3668210‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:2198489‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:2041918‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  1:1879837‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:2587141‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     >  2:181697‑M1/1‑100 (MQ=255)
cATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGA                                                                                                     <  2:87216‑M1/100‑1 (MQ=255)
                          ccAAAGTGCCACTGATTGCCTTTCTTTGTCTGATGCATCGCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagct                                                                           <  1:3813685‑M1/100‑27 (MQ=255)
                                tGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgacca                                                                     <  1:347517‑M1/100‑33 (MQ=255)
                                 gCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaa                                                                    <  2:77293‑M1/100‑34 (MQ=255)
                                 gCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaa                                                                    <  2:375138‑M1/100‑34 (MQ=255)
                                 gCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAcgccaccatcattgaggcacccagctcgaccac                                                                    <  1:3624044‑M1/100‑34 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGTATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:2490074‑M1/100‑35 (MQ=255)
                                  ccACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaag                                                                   <  1:1481582‑M1/100‑35 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  2:3537814‑M1/100‑36 (MQ=255)
                                   cACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaaga                                                                  <  2:576150‑M1/100‑36 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  1:516722‑M1/100‑37 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  2:2385688‑M1/100‑37 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  2:1194829‑M1/100‑37 (MQ=255)
                                    aCTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaa                                                                 <  2:1241547‑M1/100‑37 (MQ=255)
                                     cTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  2:3629902‑M1/100‑38 (MQ=255)
                                      tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaac                                                                <  1:972803‑M1/99‑38 (MQ=255)
                                      tGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTCCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaaca                                                               <  2:1662114‑M1/100‑39 (MQ=255)
                                         ttGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaag                                                            <  2:542163‑M1/100‑42 (MQ=255)
                                                                                         acgttggtCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgagccggaggtgcatcagaccaagaaaggcaatcag             >  1:2303192‑M1/4‑11 (MQ=255)
                                                                                          nctTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtg           >  2:283272‑M1/2‑10 (MQ=255)
                                                                                          gatctgtcgatgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtg           <  1:3326115‑M1/95‑91 (MQ=255)
                                                                                           nttgGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:1783343‑M1/2‑9 (MQ=255)
                                                                                           cTTGTTCGAtgccaccattatggagtcacccagctcgaccaagaacaaagagcagcaacgcgatcctgagatgcatcagaccaagaaaggcaatcagtg           <  2:710668‑M1/99‑91 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcgacgcgatccggagatgcatcagaccaagaagggcaatcagt            <  1:1099314‑M1/98‑90 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcagatcggaa          >  2:2379633‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2479036‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:867938‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  2:3616846‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  2:664132‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:2814045‑M1/100‑92 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          >  1:3221148‑M1/1‑9 (MQ=255)
                                                                                           cTTGGTCGAtgccaccatcattgaggcaaccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgg          <  1:3072342‑M1/100‑92 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatccgaccaagaaaggcaatcagtggc         >  1:196483‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1020967‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:3341452‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  1:2829430‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  1:1656134‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2741530‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:827343‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         >  2:1879850‑M1/1‑8 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:1935107‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2436479‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  2:2940098‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:1160921‑M1/100‑93 (MQ=255)
                                                                                            ttGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2676580‑M1/100‑93 (MQ=255)
                                                                                            tcggtcGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggc         <  1:2340840‑M1/98‑93 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        <  1:1803999‑M1/100‑94 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  1:2889772‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        <  2:58400‑M1/100‑94 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:2126249‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        >  2:3105838‑M1/1‑7 (MQ=255)
                                                                                             tGGTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggca        <  2:3364034‑M1/100‑94 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  1:949954‑M1/1‑6 (MQ=255)
                                                                                              ggTCGAtgccaccatcattgagacacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcac       >  2:2863204‑M1/1‑6 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctggaccaagaacaaagagcagcaacgcgatccggagatgcagcagaccaagaaaggcaatcagtggcac       >  1:173995‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1552265‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:925840‑M1/100‑96 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:3587721‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  1:2415906‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      >  2:1060946‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtgagatc      >  2:3326139‑M1/1‑5 (MQ=255)
                                                                                               gTCGAtgccaccaacattgaggcacccagctcgaccaagaacaaagagcagcaacgcggtccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:3288176‑M1/100‑96 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatccgaccaagaaaggcaatcagtggcactt     >  1:1750231‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagactaagaaaggcaatcagtggcactt     <  1:2654899‑M1/100‑97 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  2:992359‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     <  1:1091111‑M1/100‑97 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactt     >  1:1260947‑M1/1‑4 (MQ=255)
                                                                                                tCGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagaggcatcagaccaagaaaggcaatcagtggcactt     >  1:2700611‑M1/1‑4 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaaggaaggcaatcagtggcacttt    >  1:518366‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  1:1783017‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:331173‑M1/1‑3 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcacttt    <  2:1403744‑M1/100‑98 (MQ=255)
                                                                                                 cGAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatcaggagatgcatcagaccaagaaaggcaatcagtggcacttt    >  2:3217527‑M1/1‑3 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:2837650‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  1:639195‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:1316471‑M1/100‑99 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:1523567‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   >  2:3308388‑M1/1‑2 (MQ=255)
                                                                                                  gAtgccaccatcattgaggcacccagctcgaccaagaaaaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcact      <  1:2223854‑M1/97‑96 (MQ=255)
                                                                                                  gAtgacaccatcattgaggaacccagatcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttg   <  2:224995‑M1/100‑99 (MQ=255)
                                                                                                   atgccaccattattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2462575‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:1144952‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:672028‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2095283‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:3358800‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:3065925‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:2974145‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  1:2563271‑M1/1‑1 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  1:238258‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  <  2:775488‑M1/100‑100 (MQ=255)
                                                                                                   atgccaccatcattgaggcacccagctcgaccaagaacaaagagcagcaacgcgatccggagatgcatcagaccaagaaaggcaatcagtggcactttgg  >  2:2303080‑M1/1‑1 (MQ=255)
                                                                                                   |                                                                                                   
CATCGACACCAATGTGGGCCTTCATGCCAAAGTGCCACTGATTGCCTTTCTTGGTCTGATGCATCTCCGGATCGCGTTGCTGCTCTTTGTTCTTGGTCGAGCTGGGTGCCTCAATGATGGTGGCATCGACCAAGGTGCCTTGAGTCATCATGACGCCTGCTTCGGCCAGCCAGCGATTGATGGTCTTGAACAATTGGCG  >  NC_000913/2066733‑2066931

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.