New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2662311 =NA (NA)12 (0.090) 8/168 NT NA noncoding (3/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences
?NC_000913 2662337 = NA (NA)noncoding (29/266 nt) REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences REP184 (repetitive extragenic palindromic) element; contains 6 REP sequences

Only 100 of 201 total aligned reads displayed.

ACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662213‑2662410
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cgtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCg                                                                                                    >  2:1593574‑M1/99‑100 (MQ=255)
 gtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCgg                                                                                                   <  1:1033662‑M1/3‑1 (MQ=255)
 gtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCgg                                                                                                   >  1:1351191‑M1/98‑100 (MQ=255)
 gtaggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCg                                                                                                    >  1:2859179‑M1/98‑99 (MQ=255)
  taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  1:3032970‑M1/97‑100 (MQ=255)
  taggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGa                                                                                                  >  1:3016891‑M1/97‑100 (MQ=255)
  aTTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGa                                                                                                  >  1:2916276/1‑100 (MQ=255)
   ttCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGAt                                                                                                 >  1:3729595/1‑100 (MQ=255)
   aggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacggtgtacagaaccccagggcgtat                                                                                                 >  2:3264835‑M1/96‑97 (MQ=255)
   aggtcggataaggcgttcacgccgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGAt                                                                                                 <  1:657663‑M1/5‑1 (MQ=255)
     cccGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgc                                                                                               >  2:252771/1‑100 (MQ=255)
         aGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATgcggcg                                                                                           <  1:938484/100‑1 (MQ=255)
           tAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTg                                                                                         <  2:1315049/100‑1 (MQ=255)
             aaTTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTATCGGATGCGTCGTGa                                                                                        >  1:2250350/1‑99 (MQ=255)
               ttGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                     >  2:2838644/1‑100 (MQ=255)
               ttGGTCAACTATTTACTTGACTGATTTAGTCGAGTATTTGACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACg                                                                                     <  1:2704128/100‑1 (MQ=255)
                  gTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCa                                                                                  >  1:663130/1‑100 (MQ=255)
                   tCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCat                                                                                 >  2:3021853/1‑100 (MQ=255)
                    cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                <  2:1145230/100‑1 (MQ=255)
                    cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  1:2556501/1‑100 (MQ=255)
                    cAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCata                                                                                >  1:1766427/1‑100 (MQ=255)
                      aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              >  2:3735014/1‑100 (MQ=255)
                      aCTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATc                                                                              >  1:1965336/1‑100 (MQ=255)
                       cTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTTTTTTGTTTTTTGTACCTGTTGTCAGATGAGTCGTGAACGCCatat                                                                               >  1:3355174/1‑98 (MQ=255)
                        tATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCg                                                                            <  1:2838622/100‑1 (MQ=255)
                         cgcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGc                                                                           >  2:2036714‑M1/74‑100 (MQ=255)
                         aTTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGc                                                                           >  1:762752/1‑100 (MQ=255)
                          gcatccgacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCTGATGCGGCGTGAACGCCATATCCGcc                                                                          >  1:2443448‑M1/73‑100 (MQ=255)
                            tACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCt                                                                        >  1:884481/1‑100 (MQ=255)
                               ttGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTggg                                                                     <  1:2754605/100‑1 (MQ=255)
                               ttGACTGATATAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTGTCGTGGCGTTTGTACCTGTTGTCGGATATGGCGTTCACGCCGCATCCgacaacag                                                                     <  1:1581565/100‑8 (MQ=21)
                                tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    >  2:480619/1‑100 (MQ=255)
                                tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    <  2:1922526/100‑1 (MQ=255)
                                tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    <  1:2519044/100‑1 (MQ=255)
                                tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    >  1:3480508/1‑100 (MQ=255)
                                tGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    >  2:3583776/1‑100 (MQ=255)
                                gacagccgttgcctgatgcgacgcgtaatgcgtcttatcaggcctacagtgtacagaaccccagggCGGATGCGGCGTGAACGCCATATCCGCCCTgggg                                                                    >  1:2446245‑M1/67‑100 (MQ=255)
                                 gACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGt                                                                   >  2:2472066/1‑100 (MQ=255)
                                   cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGACCGCCATATCCGCCCTAGGGTTc                                                                 <  1:175117/100‑1 (MQ=255)
                                   cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 >  1:2884940/1‑100 (MQ=255)
                                   cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 <  2:780122/100‑1 (MQ=255)
                                   cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTc                                                                 >  2:657670/1‑100 (MQ=255)
                                   cTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTCTACCTGTTATCGCCTGCGGCGTGAACGCAATATCCGCCCTGAGGTTc                                                                 >  1:3263938/1‑100 (MQ=255)
                                      aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              <  2:1720239/100‑1 (MQ=255)
                                      aTTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGt                                                              >  2:3289797/1‑100 (MQ=255)
                                        ttAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTac                                                            <  1:1102490/100‑1 (MQ=255)
                                           gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTTTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGGTCTGTACACt                                                         >  1:3742541/1‑100 (MQ=255)
                                           gTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACt                                                         >  2:2632488/1‑100 (MQ=255)
                                             cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  2:871031/1‑100 (MQ=255)
                                             cGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGt                                                       >  1:3633153/1‑100 (MQ=255)
                                              ccgatcttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTa                                                      <  2:3161328/94‑1 (MQ=255)
                                               ggTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAg                                                     <  2:1081914/100‑1 (MQ=255)
                                                gTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAgg                                                    <  2:2699826/100‑1 (MQ=255)
                                                  aTTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGcc                                                  <  2:5549/100‑1 (MQ=255)
                                                    ttAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTg                                                >  2:3143908/1‑100 (MQ=255)
                                                     tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTaagatcgg                                               >  1:3161304/1‑93 (MQ=255)
                                                     tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               >  1:3707307/1‑100 (MQ=255)
                                                     tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               >  2:3002570/1‑100 (MQ=255)
                                                     tAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGa                                               <  2:1538289/100‑1 (MQ=255)
                                                       aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             <  2:2069050/100‑1 (MQ=255)
                                                       aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             <  2:3761990/100‑1 (MQ=255)
                                                       aCCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATa                                             <  1:2047808/100‑1 (MQ=255)
                                                        ccTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATaa                                            <  1:2325038/100‑1 (MQ=255)
                                                             aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGc                                       >  1:2428073/1‑100 (MQ=255)
                                                             aGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGc                                       >  1:2674082/1‑100 (MQ=255)
                                                              gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                      <  2:3447954/100‑1 (MQ=255)
                                                              gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                      >  1:3107462/1‑100 (MQ=255)
                                                              gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                      <  1:1298177/100‑1 (MQ=255)
                                                              gTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCa                                      <  2:2316527/100‑1 (MQ=255)
                                                                  cATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                                  >  2:1323594/1‑100 (MQ=255)
                                                                   aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAcg                                 >  1:425231/1‑100 (MQ=255)
                                                                   aTTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTAc                                  >  2:849802/1‑99 (MQ=255)
                                                                    ttttttttTCATGGCGTTTGTACCTGTTGTCGGATGCGGCGGTAACGCCATATCCGCCCTGGGGTTCGGTACACTGTATGCCTTATAAGACGCATTAcgc                                >  2:2646817/1‑100 (MQ=21)
                                                                      tttttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGt                              >  1:41454/1‑100 (MQ=255)
                                                                         ttATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGc                           >  2:2801391/1‑100 (MQ=255)
                                                                             cGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCa                       >  1:3512979/1‑100 (MQ=255)
                                                                             cGTGGCGTTTGTACCTGTTGCCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCa                       >  1:2363197/1‑100 (MQ=255)
                                                                              gTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCACCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAg                      >  1:3166574/1‑100 (MQ=255)
                                                                                ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                    >  2:134943/1‑100 (MQ=255)
                                                                                ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGc                    >  2:2956726/1‑100 (MQ=255)
                                                                                ggCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCAGCAGGc                    >  2:197584/1‑100 (MQ=255)
                                                                                   gTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAAc                 <  1:2801369/100‑1 (MQ=255)
                                                                                    tttGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACg                <  1:1332768/100‑1 (MQ=255)
                                                                                    tttGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACg                <  2:1243656/100‑1 (MQ=255)
                                                                                      tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              >  2:30707/1‑100 (MQ=255)
                                                                                      tGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGc              >  2:3689404/1‑100 (MQ=255)
                                                                                       gTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCt             >  1:1997344/1‑100 (MQ=255)
                                                                                        tACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTg            >  1:562698/1‑100 (MQ=255)
                                                                                         aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGt           >  2:3645625/1‑100 (MQ=255)
                                                                                         aCCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGAAGCATTACGCGTCGCATCAGGCAACGGCTg            >  1:1445425/1‑99 (MQ=255)
                                                                                           cTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCg         <  1:2122090/100‑1 (MQ=255)
                                                                                             nttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       >  2:1456686/2‑100 (MQ=255)
                                                                                             gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       >  2:142342/1‑100 (MQ=255)
                                                                                             gttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGa       >  2:2913575/1‑100 (MQ=255)
                                                                                              ttgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGAt      >  2:126071/1‑100 (MQ=255)
                                                                                               tgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATg     >  2:2761319/1‑100 (MQ=255)
                                                                                               tgtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCCGTCGGATg     >  1:642080/1‑100 (MQ=255)
                                                                                                gtCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCgg        >  1:494722/1‑96 (MQ=255)
                                                                                                 gCGGATATGGCGTTCACGCCGCATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATgc    <  1:1885295‑M1/98‑1 (MQ=255)
                                                                                                  CGGATGCGGCGTGAACGCCATATCCGACCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCACATCAGGCAACGGCTGTCGGATgcgg  <  1:485462‑M1/100‑1 (MQ=255)
                                                                                                  |                                                                                                   
ACATTCCCGAGTAAATTGGTCAACTATTTACTTGACTGATTTAGTCGGGTATTTAACCTTCAGTGCCATTTTTTTATCGTGGCGTTTGTACCTGTTGTCGGATGCGGCGTGAACGCCATATCCGCCCTGGGGTTCTGTACACTGTAGGCCTGATAAGACGCATTACGCGTCGCATCAGGCAACGGCTGTCGGATGCGG  >  NC_000913/2662213‑2662410

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.