BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3546221	NA (NA)	14 (0.110)	7/166	NT	NA	intergenic (+22/‑338)	nfuA/gntT	Fe/S biogenesis protein, putative scaffold/chaperone protein/gluconate transporter, high‑affinity GNT I system
*	?	NC_000913	= 3546253	NA (NA)	14 (0.110)	7/166	NT	NA	noncoding (32/36 nt)	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP253 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 201 total aligned reads displayed.

CTGCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGC  >  NC_000913/3546122‑3546320

ntgctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGAtt                                                                                                     >  2:2425271/2‑100 (MQ=255)

 tgctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTg                                                                                                    >  1:1341986‑M1/1‑99 (MQ=255)

  gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   >  2:84646‑M1/1‑98 (MQ=255)

  gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   >  2:31637‑M1/1‑98 (MQ=255)

  gctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgc                                                                                                   <  2:3599560‑M1/100‑3 (MQ=255)

   ctgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcc                                                                                                  <  1:475216‑M1/100‑4 (MQ=255)

    tgAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgccc                                                                                                 >  2:3341303‑M1/1‑96 (MQ=255)

     gAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccg                                                                                                <  2:2891054‑M1/100‑6 (MQ=255)

      aaCGAATCCCCGGAGCTGAAAGGCGTACGCGAGCTCACCGAACACCAGCGCGGCGAAGACTCCTACAACTAAGTTATCCCCTCATTTGTAGATTg                                                                                                    <  1:3385299/95‑1 (MQ=255)

         gagttCCCGGAGCTGAAAGGTGTGCGCGATCTCACAGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGc                                                                                            >  1:755903/4‑100 (MQ=255)

           aTTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGa                                                                                          >  1:387842/1‑100 (MQ=255)

              cccGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGc                                                                                       >  1:2717227/1‑100 (MQ=255)

                cGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCCACGCTa                                                                                     <  1:2406228/100‑1 (MQ=255)

                   aGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAg                                                                                  >  2:2948834/1‑100 (MQ=255)

                     cTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCg                                                                                <  2:2262923/100‑1 (MQ=255)

                     cTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCg                                                                                >  2:1912826/1‑100 (MQ=255)

                      tGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGt                                                                               >  2:3782006/1‑100 (MQ=255)

                      tGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGt                                                                               >  2:1375592/1‑100 (MQ=255)

                       gAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTc                                                                              <  2:1302365/100‑1 (MQ=255)

                       gAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTc                                                                              >  1:2883403/1‑100 (MQ=255)

                          aGGTTTGTGCTATCTCACCTGACACCAGCGCGGCGAACACTCCTACTACTAAGCTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCa                                                                             <  1:3745240/98‑1 (MQ=255)

                             tgtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgatgcgacgctttagcgtcgcatcg                                                                        <  2:2033844‑M1/100‑30 (MQ=255)

                             tgtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACGAACTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCG                                                                        >  1:155469‑M2/1‑100 (MQ=255)

                              gtgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGG                                                                       <  1:197667‑M2/100‑1 (MQ=255)

                               tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAGGCGTCATTTCGGG                                                                      >  2:2594914‑M2/1‑100 (MQ=255)

                               tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  1:3546988‑M2/1‑100 (MQ=255)

                               tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  2:853519‑M2/1‑100 (MQ=255)

                               tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  1:1367106‑M2/1‑100 (MQ=255)

                               tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  2:2221450‑M2/1‑100 (MQ=255)

                               tgCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGG                                                                      >  1:2631952‑M2/1‑100 (MQ=255)

                                gcgcGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggc                                                                     <  2:3563600‑M1/100‑33 (MQ=255)

                                gcgcGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGn                                                                     >  2:2920143‑M2/1‑99 (MQ=255)

                                gcgcGAACTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCGGATGCGACGCTAAAGCGTCATTTCGGG                                                                      <  2:1645815‑M2/99‑1 (MQ=255)

                                gatcgcgcacaccgaacacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGC                                                                     >  1:3101753‑M2/10‑100 (MQ=255)

                                 cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggca                                                                    <  2:2208885‑M1/100‑34 (MQ=255)

                                 cgcgATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGcc                                                                    <  2:799440/100‑1 (MQ=255)

                                    gATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTGGATTACCCGATGCGACGCTAAAGCGTCATTTCGGGCCTAc                                                                 <  1:2196898/100‑1 (MQ=255)

                                    gATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTgcccgaaatgacgctttagcgtcgcatcgggcaatc                                                                 <  1:2998668‑M1/100‑37 (MQ=255)

                                     aTCTCACGGAATACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCACGATGCGACGCTAAAGCGTCATTTCGGGCCTACg                                                                >  1:2026347/1‑100 (MQ=255)

                                     aTCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACg                                                                <  2:1230141/100‑1 (MQ=255)

                                      tctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGt                                                               <  2:1100229/100‑1 (MQ=255)

                                       ctcACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGtt                                                              >  1:3525216/1‑100 (MQ=255)

                                        tcACCGAACACCAGCGCGGCAAACACTCCTAATACTATCTTATCCCCCCTTTTGTAGAGTGCCCGTTGAGATGCTAAAGCGTTATTTCGGGACTACGTTg                                                             <  1:849359/100‑1 (MQ=255)

                                         cACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGa                                                            >  1:1200886/1‑100 (MQ=255)

                                           ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          <  1:3341279/100‑1 (MQ=255)

                                           ccGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          <  1:3279537/100‑1 (MQ=255)

                                            cGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAAc                                                          >  1:192639/1‑99 (MQ=255)

                                              aaCACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtg                                                       <  1:1801711/100‑1 (MQ=255)

                                              aaCACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtg                                                       <  2:1447200/100‑1 (MQ=255)

                                               acacCAGCGCGGCGAACACTCCTACTACTCAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgt                                                      <  2:1921857/100‑1 (MQ=255)

                                               acacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgt                                                      <  1:1067403/100‑1 (MQ=255)

                                                cacCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACAtgtg                                                     <  2:3197810/100‑1 (MQ=255)

                                                 acCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGc                                                    >  2:1526453/1‑100 (MQ=255)

                                                  ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   <  1:1994299/100‑1 (MQ=255)

                                                  ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  1:1772978/1‑100 (MQ=255)

                                                  ccAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGcc                                                   >  2:2532197/1‑100 (MQ=255)

                                                    aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                 >  2:2832274/1‑100 (MQ=255)

                                                    aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAg                                                 >  2:282344/1‑100 (MQ=255)

                                                    aGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAACGTCATTTCGGGCCTACGTTGAACATGTccc                                                   >  2:355644/1‑98 (MQ=255)

                                                      cgcgGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGAc                                               <  1:1428592/100‑1 (MQ=255)

                                                       gcggcgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACg                                              >  2:1193518/1‑100 (MQ=255)

                                                           cgAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTgg                                          <  1:1526440/100‑1 (MQ=255)

                                                            gAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgc                                         >  1:878260/1‑100 (MQ=255)

                                                              acacTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGgcgc                                       <  2:3075662/100‑1 (MQ=255)

                                                               cacTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgca                                      >  2:1591602/1‑100 (MQ=255)

                                                                acTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcag                                     <  2:3450715/100‑1 (MQ=255)

                                                                acTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcag                                     <  2:2170279/100‑1 (MQ=255)

                                                                 cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGcgccgc                                    >  1:1178523/1‑100 (MQ=255)

                                                                 cTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCgcagc                                    >  1:778023/1‑100 (MQ=255)

                                                                      actactaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGc                               >  2:196301/1‑100 (MQ=255)

                                                                         actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGTGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  1:2461170/1‑100 (MQ=255)

                                                                         actaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCttt                            >  2:1003551/1‑100 (MQ=255)

                                                                          ctaAGTTATCCTCTCTTTTGTAGATTGTCCGATGCTACGCTAAAGCGTCATTTCGGGCCTACGTTGAACTTGTGCCAGATGTTGGCGCAGCCTTGCTTTg                           <  1:627233/100‑1 (MQ=255)

                                                                          ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTg                           >  2:759629/1‑100 (MQ=255)

                                                                          ctaAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGATTTg                           >  2:1066496/1‑100 (MQ=255)

                                                                            aaGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTc                         >  2:548966/1‑100 (MQ=255)

                                                                               ttATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCaaa                      <  1:3032173/100‑1 (MQ=255)

                                                                                  tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                   <  1:2503706/100‑1 (MQ=255)

                                                                                  tCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATcc                   >  1:2309252/1‑100 (MQ=255)

                                                                                   ccccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCt                  >  2:3722039/1‑100 (MQ=255)

                                                                                   ccccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCt                  >  1:516440/1‑100 (MQ=255)

                                                                                    cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                 >  2:707415/1‑100 (MQ=255)

                                                                                    cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                 >  2:28746/1‑100 (MQ=255)

                                                                                    cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                 >  2:3316686/1‑100 (MQ=255)

                                                                                    cccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTc                 >  1:3225131/1‑100 (MQ=255)

                                                                                     ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTcn                <  1:3181270/100‑2 (MQ=255)

                                                                                     ccTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTCCCAGACCTTGGCGCAGCATTGCTTTGTCACATCCTCg                >  1:1031809/1‑100 (MQ=255)

                                                                                         ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc            <  2:1412031/100‑1 (MQ=255)

                                                                                         ttttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTc            <  2:1793196/100‑1 (MQ=255)

                                                                                          tttGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCg           <  2:2803852/100‑1 (MQ=255)

                                                                                            tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGtt         >  1:1130729/1‑100 (MQ=255)

                                                                                            tGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGtt         <  1:2806662/100‑1 (MQ=255)

                                                                                             gTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGttt        >  2:897056/1‑100 (MQ=255)

                                                                                             gTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGttt        >  2:3215266/1‑100 (MQ=255)

                                                                                               aGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTcc      >  2:651339/1‑100 (MQ=255)

                                                                                                gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCaatctacaaaagaggggataacttagcagtaggagtgttcgccgcgctggtgttcggtgagatc     <  2:1448828‑M2/100‑65 (MQ=255)

                                                                                                gATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTccc     >  2:3641265/1‑100 (MQ=255)

                                                                                                 aTTGCGCGATGCGACGCCAAAGCGTCATTTCGGGCaatctacaaaagaggggacaacttagtagtaggagtgttcgccgcgctggtgttcggtgagat      <  1:1788803‑M2/98‑64 (MQ=255)

                                                                                                  ttGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcg   >  2:1329597/1‑100 (MQ=255)

                                                                                                   tGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCcgc  <  2:2354366/100‑1 (MQ=255)

CTGCTGAACGAATTCCCGGAGCTGAAAGGTGTGCGCGATCTCACCGAACACCAGCGCGGCGAACACTCCTACTACTAAGTTATCCCCTCTTTTGTAGATTGCCCGATGCGACGCTAAAGCGTCATTTCGGGCCTACGTTGAACATGTGCCAGACGTTGGCGCAGCATTGCTTTGTCAAATCCTCGGTTCGTTTCCCCGC  >  NC_000913/3546122‑3546320

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.