New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 349605 =NA (NA)17 (0.130) 6/164 NT NA noncoding (1/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences
?NC_000913 349637 = NA (NA)noncoding (33/365 nt) REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences REP25 (repetitive extragenic palindromic) element; contains 8 REP sequences

Only 100 of 194 total aligned reads displayed.

TCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGG  >  NC_000913/349538‑349736
                                                                                                   |                                                                                                   
tCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGcc                                                                                                     <  1:797729/100‑1 (MQ=255)
  gACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTa                                                                                                   >  1:1925320/1‑100 (MQ=255)
  aggcatcggttgtcggatgcgacgctatgcgtcttatccgacctacagttcagtgcaccccgtagGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTa                                                                                                   >  2:1513217‑M1/66‑100 (MQ=255)
    gcatcggttgtcggatgcgacgctatgcgtcttatccgacctacagttcagtgcacctcgtagGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTAc                                                                                                  >  1:342026‑M1/64‑99 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              >  1:1265302/1‑100 (MQ=255)
       ccTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGACTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAgg                                                                                              >  2:1545894/1‑100 (MQ=255)
         tGTTTGCCGGGAGCGAGGGGAAATAAAAAACGCCCGTTGATTGTATTCGGCAGTGGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTg                                                                                            <  1:1365652/100‑1 (MQ=25)
            ttGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCAc                                                                                         <  2:1939646/100‑1 (MQ=255)
            ttGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCAc                                                                                         <  1:3148098/100‑1 (MQ=255)
               ctcGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                      >  2:2607345/3‑100 (MQ=255)
               cccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGa                                                                                      >  1:187553/1‑100 (MQ=255)
                ccGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGaa                                                                                     >  2:2546311/1‑100 (MQ=255)
                   tAGCCAGGAGAAAAAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTg                                                                                  <  1:1804137/100‑1 (MQ=255)
                    aGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                 <  1:1675514/100‑1 (MQ=255)
                    aGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGt                                                                                 >  1:197944/1‑100 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                <  2:1648484/100‑1 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                <  2:2131902/100‑1 (MQ=255)
                     gCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTa                                                                                <  2:3051807/100‑1 (MQ=255)
                      ccAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAg                                                                               >  1:617930/1‑100 (MQ=255)
                       cAGGTGAAAGAAAAAACGCGCGGTGATTGTATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGGGTGCACTGAACTGTAg                                                                               <  1:3420929/99‑1 (MQ=11)
                        aGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGt                                                                             >  2:633480/1‑100 (MQ=255)
                          gTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                           >  2:2270858/1‑100 (MQ=255)
                          gTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCg                                                                           <  2:1152448/100‑1 (MQ=255)
                           tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                          >  1:3740507/1‑100 (MQ=255)
                           tGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCgg                                                                          <  2:1883126/100‑1 (MQ=255)
                            gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGGACTGTACGTCg                                                                           >  1:883892/1‑98 (MQ=255)
                            gAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGa                                                                         >  2:3534815/1‑100 (MQ=255)
                             aaaTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                        <  1:2426332/100‑1 (MQ=255)
                             aaaTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                        >  1:1203487/1‑100 (MQ=255)
                             aaaTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                        <  2:264571/100‑1 (MQ=255)
                             aaaTAAAAAACGCCCGTGTATTGTATTCGACAGCCGAGGCCTGATGCGTCGCTGACGCGACTTATCATGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                        <  1:2933124/100‑1 (MQ=21)
                              aaTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                       >  2:1069991/1‑100 (MQ=255)
                              aaTAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCCGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATa                                                                       <  1:1425409/100‑1 (MQ=255)
                                 aaaaagCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGAt                                                                        <  1:1589918/96‑1 (MQ=255)
                                 aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGa                                                                    >  2:2961422/1‑100 (MQ=255)
                                 aaaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGa                                                                    <  2:3074228/100‑1 (MQ=255)
                                  aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAc                                                                   <  2:2039572/100‑1 (MQ=255)
                                  aaaaaCGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAc                                                                   >  1:2886940/1‑100 (MQ=255)
                                       cGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATg                                                              <  2:2045774/100‑1 (MQ=255)
                                        gctcGTCGAGTGGATTCGACAGCCCATGCCTGATGCGTCGCTGACGCGACGCATCAGGCATAGGACGTGCACTGAACTGTAGGTCGGATAAGACgg                                                                 <  1:275721/93‑1 (MQ=14)
                                        gCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATg                                                              <  1:1290262/99‑1 (MQ=255)
                                          cctttGATTGTATTCGACAGCCGATGCCTGATGCTTCGCTGACGCGACTTATCAGGCCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCg                                                           <  1:2037087/97‑1 (MQ=255)
                                             ttGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCg                                                        <  2:1172332/100‑1 (MQ=255)
                                             ttGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCg                                                        <  2:3081790/100‑1 (MQ=255)
                                                  tGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATcc                                                   >  2:1747621/1‑100 (MQ=255)
                                                   tcagtgcacctcgtaggcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCg                                                  >  2:2663872‑M2/49‑100 (MQ=255)
                                                    tATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGa                                                 <  2:3371818/100‑1 (MQ=255)
                                                     aTTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGAc                                                >  1:1517052/1‑100 (MQ=255)
                                                      ttCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACa                                               >  2:2907627/1‑100 (MQ=255)
                                                       tCGACAGCCGATGCCTGATGCGTCGCTGACGTGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACaa                                              <  1:3499832/100‑1 (MQ=255)
                                                        cGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATACGACGGATGGCGTCGCATCCGACAAc                                             >  1:3521667/1‑100 (MQ=255)
                                                        cGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACacc                                             >  1:2337474/1‑98 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCTGGCCTACGAGTTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  2:602713/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  1:902865/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  1:3098657/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAAcc                                            <  1:3640848/100‑1 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATAGCGTCGCATCCGACAAcc                                            >  1:1402244/1‑100 (MQ=255)
                                                         gACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGAAGCCTGGCGTCGCATCCGActgcc                                            >  1:399251/1‑96 (MQ=14)
                                                           cAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGa                                          >  2:3636479/1‑100 (MQ=255)
                                                             gCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATg                                        >  2:3693792/1‑100 (MQ=255)
                                                              ccGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGAt                                         >  2:1250052/1‑98 (MQ=255)
                                                              ccGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGc                                       <  2:275860/100‑1 (MQ=255)
                                                               cGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGcc                                      <  2:1432564/100‑1 (MQ=255)
                                                                  ggcctgataagtcacgtcagcggcgcatcaggcCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGa                                   >  1:295826‑M2/34‑100 (MQ=255)
                                                                   gcctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGGCGCATCCGACAACCGATGCCTg                                    >  1:3823788‑M2/33‑98 (MQ=255)
                                                                    cctgataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATg                                 >  1:8586‑M2/32‑100 (MQ=255)
                                                                    CCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGCATGGCGTCGCATCCGACAACCGATGCCTGATg                                 <  1:2559897‑M1/100‑1 (MQ=255)
                                                                     ctgataagtcgcgtcagcggcgcatcaggcCTACGGGGTGCACTGAACTGTAGGTCGGATAAGACGCATAGCGTCGCATCCGACAACCGATGCCTGATgc                                >  2:3139695‑M2/31‑100 (MQ=255)
                                                                     CTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgc                                <  1:269600‑M1/100‑1 (MQ=255)
                                                                      TGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcg                               <  2:3853311‑M1/100‑1 (MQ=255)
                                                                       gataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATGCGACAAGCGATGCCTGATgcg                               >  1:1140427‑M2/29‑99 (MQ=255)
                                                                       gataagtcgcgtcagcgacgcatcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATgcgc                              >  2:552876‑M2/29‑100 (MQ=255)
                                                                        ATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgcc                             >  2:1806046‑M1/1‑100 (MQ=255)
                                                                          gCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                           <  2:876533/100‑1 (MQ=255)
                                                                          gCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGcgccgc                           <  2:370432/100‑1 (MQ=255)
                                                                            gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                         <  2:529580/100‑1 (MQ=255)
                                                                            gTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTg                         >  2:1487853/1‑100 (MQ=255)
                                                                              cGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                       >  1:2101378/1‑100 (MQ=255)
                                                                              cGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGAc                       <  2:2385280/100‑1 (MQ=255)
                                                                               gCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACg                      <  2:3491036/100‑1 (MQ=255)
                                                                               gCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACg                      <  2:2441574/100‑1 (MQ=255)
                                                                                 tGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTg                    >  1:1062157/1‑100 (MQ=255)
                                                                                   aCGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGAc                  <  2:1062165/100‑1 (MQ=255)
                                                                                    cgcgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACt                 <  1:483337/100‑1 (MQ=255)
                                                                                     cgatcTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACtt                <  2:3141738/96‑1 (MQ=255)
                                                                                      cgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGGCGCTGGCGCGACTTa               >  1:648942/1‑100 (MQ=255)
                                                                                      cgACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTa               >  1:1072242/1‑100 (MQ=255)
                                                                                       gACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTAt              >  2:3574607/1‑100 (MQ=255)
                                                                                       gACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTAt              >  1:3767438/1‑100 (MQ=255)
                                                                                        aCTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATc             >  2:913643/1‑100 (MQ=255)
                                                                                         cTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCGTGAGGCGCCGCTGACGTGACTTa               >  1:131233/1‑97 (MQ=255)
                                                                                          ttATCAGGCCTAGGAGGTGCACCGAACTGTAGGTCGGATAAGACGGATTGCTTCGCATCCGACAACCGATGCCTGGTGCGCCGCTGAGGTGACTTATCAg           <  1:1479668/100‑1 (MQ=14)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          >  2:2526012/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          >  2:1847465/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          >  2:1103352/1‑100 (MQ=255)
                                                                                           tATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGGGACTTATCAgg          >  2:719935/1‑100 (MQ=255)
                                                                                           catcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAgg          <  1:552869‑M2/92‑1 (MQ=255)
                                                                                             tcaggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGcc        <  1:2313313‑M2/94‑1 (MQ=255)
                                                                                              caggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCt       >  1:505675‑M2/6‑100 (MQ=255)
                                                                                               aggcCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGCGACTTATCAGGc         >  1:2049472‑M2/5‑97 (MQ=255)
                                                                                                   |                                                                                                   
TCGACAACCTGTTTGCCCGTAGCCAGGTGAAATAAAAAACGCCCGTTGATTGTATTCGACAGCCGATGCCTGATGCGTCGCTGACGCGACTTATCAGGCCTACGAGGTGCACTGAACTGTAGGTCGGATAAGACGGATGGCGTCGCATCCGACAACCGATGCCTGATGCGCCGCTGACGTGACTTATCAGGCCTACGGG  >  NC_000913/349538‑349736

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.