BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3781698 =	NA (NA)	10 (0.080)	8/164	NT	NA	noncoding (1/29 nt)	REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP273 (repetitive extragenic palindromic) element; contains 1 REP sequences
*	?	NC_000913	3781727 =	NA (NA)	10 (0.080)	8/164	NT	NA	intergenic (+39/+14)	trmL/cysE	tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent/serine acetyltransferase

Only 100 of 195 total aligned reads displayed.

GGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGTT  >  NC_000913/3781628‑3781826

ggTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                     >  2:2621999/1‑100 (MQ=255)

 ggaccagcatttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCa                                                                                                     >  1:1629088‑M1/70‑99 (MQ=255)

     tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                                                >  2:3095689/1‑100 (MQ=255)

     tggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATc                                                                                                >  2:108986/1‑100 (MQ=255)

      ggtgTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATca                                                                                               >  2:478183/1‑100 (MQ=255)

         gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                            <  1:347924/100‑1 (MQ=255)

         gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                            <  2:2874636/100‑1 (MQ=255)

         gtATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAg                                                                                            >  1:671080/1‑100 (MQ=255)

          tttcaacggtattaaccatacatttgagtatggggatgggatctaatgtcctgtgatcgtGCCGGATAGATGATTACATCGCATCCGGCACGATCACAgg                                                                                           >  2:2567569‑M1/61‑100 (MQ=255)

          tATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAgg                                                                                           <  1:3793524/100‑1 (MQ=255)

           aTGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGa                                                                                          >  1:979078/1‑100 (MQ=255)

            tGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAc                                                                                         >  1:77039/1‑100 (MQ=255)

               gatcTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACAtt                                                                                      <  2:2172194/97‑1 (MQ=255)

                 ccTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGAAATTAg                                                                                    >  2:606536/1‑100 (MQ=255)

                  ntGGCGGCAGTTGGGGTATCCGCGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGAGAGATGATTACATCGCATCCGGCACCATCACAGGACATTAGa                                                                                   >  1:2247320/2‑100 (MQ=255)

                   tGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGat                                                                                  >  1:93411/1‑100 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                 <  2:1390014/100‑1 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                 <  1:2617666/100‑1 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                 <  2:3193523/100‑1 (MQ=255)

                    ggcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatc                                                                                 <  1:235865/100‑1 (MQ=255)

                     gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                                                <  1:2153833/100‑1 (MQ=255)

                     gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                                                <  2:2379674/100‑1 (MQ=255)

                     gcggcAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcc                                                                                <  1:1255922/100‑1 (MQ=255)

                        gcAGTTGGGGGATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccat                                                                             <  1:1650027/100‑1 (MQ=255)

                         cAGTTGGGGTATCCGGGAGTGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatc                                                                            >  1:3413971/1‑100 (MQ=255)

                          aGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGatcccatcc                                                                           <  1:1004145/100‑1 (MQ=255)

                             tGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                                                        >  1:2894669/1‑100 (MQ=255)

                             tGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                                                        >  1:2918030/1‑100 (MQ=255)

                              ggggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCAt                                                                       <  1:489951/100‑1 (MQ=255)

                               gggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCa                                                                        <  1:1786275/98‑1 (MQ=255)

                                ggTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATAc                                                                     >  1:3762190/1‑100 (MQ=255)

                                  tATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTc                                                                   >  1:2594879/1‑100 (MQ=255)

                                   aTCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCa                                                                  >  2:2762514/1‑100 (MQ=255)

                                      cGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAAt                                                               <  2:178928/100‑1 (MQ=255)

                                       gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGTACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                                              >  1:1991664/1‑100 (MQ=255)

                                       gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                                              <  2:3026652/100‑1 (MQ=255)

                                       gggAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATg                                                              <  2:3025235/100‑1 (MQ=255)

                                            cGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATgg                                                         >  2:357451/1‑100 (MQ=255)

                                             ggTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACTTTAGATTCCATCCCCATACTCAAATGTATGGt                                                        <  1:2650365/100‑1 (MQ=255)

                                               tATTGAGAGTTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                                                      <  2:1023349/100‑1 (MQ=255)

                                               tATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTa                                                      <  1:1346304/100‑1 (MQ=255)

                                                aTTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTaa                                                     >  1:406678/1‑100 (MQ=255)

                                                  tGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATa                                                   >  2:1274877/1‑100 (MQ=255)

                                                   gagagaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATAc                                                  >  2:2480404/1‑100 (MQ=255)

                                                      agaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGt                                               <  2:827081/100‑1 (MQ=255)

                                                       gaTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGtt                                              >  1:1179400/1‑100 (MQ=255)

                                                        aTTAGTTACTGTAGGCCGGATAGATGATTTCATCGCATCCGGCACGATCACAGGACATTAGATCCCTTCCCCATACTCAAATGTATGGTTAATACCGTTg                                             <  1:2315269/100‑1 (MQ=255)

                                                        aTTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTg                                             <  2:3632370/100‑1 (MQ=255)

                                                            gTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt                                         <  2:585694/100‑1 (MQ=255)

                                                            gTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAAt                                         >  2:2231572/1‑100 (MQ=255)

                                                              tACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGc                                       <  1:1043363/100‑1 (MQ=255)

                                                               aCTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCt                                      <  2:1942002/100‑1 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     >  2:3465201/1‑100 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     >  2:1471871/1‑100 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     >  2:1715602/1‑100 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     >  2:2397787/1‑100 (MQ=255)

                                                                cTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTg                                     <  2:2340589/100‑1 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                    <  2:2825847/100‑1 (MQ=255)

                                                                 tGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTgg                                    <  2:2658942/100‑1 (MQ=255)

                                                                  gTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGt                                   <  2:2744274/100‑1 (MQ=255)

                                                                   cgtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTc                                  >  1:569928‑M2/33‑100 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                 >  1:1124342‑M2/32‑100 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                 >  2:1725392‑M2/32‑100 (MQ=255)

                                                                    gtgccggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGATGAAATGCTGGTcc                                 >  1:2627212‑M2/32‑100 (MQ=255)

                                                                    aGGCCGTATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTcc                                 <  1:196805/100‑1 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                >  1:970430/1‑100 (MQ=255)

                                                                     ggCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCa                                >  1:2865169/1‑100 (MQ=255)

                                                                        cggatgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCatat                             <  1:2567549‑M2/73‑1 (MQ=255)

                                                                        cGGATAGATGATTACCTCGCATCCGTCACGATCACAGGACATTAGAGCCCATCCCCATACTCAAATGTATGTTTAATACCGTTGAAATGCTGGTCCata                              <  1:3711562/99‑1 (MQ=255)

                                                                         GGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATc                            >  1:1926188‑M1/1‑100 (MQ=255)

                                                                           ATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATACTGGTCCATATCCa                          <  2:3221919‑M1/100‑1 (MQ=255)

                                                                            tgcgatgtaatcatctatccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATGCCGTTGAAATGCTGGTCCATATCCAt                         >  2:149777‑M2/24‑100 (MQ=255)

                                                                             aGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCAtt                        <  2:798068/100‑1 (MQ=255)

                                                                             aGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCAtt                        <  1:2655309/100‑1 (MQ=255)

                                                                              gatgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTg                       <  1:2411041/100‑1 (MQ=255)

                                                                              gatgatTACATCGCATCCGGCACGATCACAGGACATTAGATCACATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTg                       >  1:1519462/1‑100 (MQ=255)

                                                                                tgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGAt                     >  2:1539565/1‑100 (MQ=255)

                                                                                tgatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGAt                     >  2:3420711/1‑100 (MQ=255)

                                                                                 gatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATg                    <  2:671087/100‑1 (MQ=255)

                                                                                 gatTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATg                    <  1:2974323/100‑1 (MQ=255)

                                                                                   ttACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGc                  >  1:3838003/1‑100 (MQ=255)

                                                                                    tACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCt                 <  2:2431892/100‑1 (MQ=255)

                                                                                       aTCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTAt              <  1:2813275/100‑1 (MQ=255)

                                                                                        tCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATc             <  1:108983/100‑1 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc           <  1:308760/100‑1 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGc           >  2:3627989/1‑100 (MQ=255)

                                                                                          gCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGGTAATACCGTTGAACTGCTGGTCCATATCCATTGATGGCTTATc             <  1:1434959/98‑1 (MQ=255)

                                                                                            atccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTg         <  1:1689589‑M2/93‑1 (MQ=255)

                                                                                              ccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTc       <  2:1662122‑M2/95‑1 (MQ=255)

                                                                                              ccggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTc       <  1:529904‑M2/95‑1 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGt        >  1:3744783‑M2/5‑98 (MQ=255)

                                                                                               cggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCt      >  2:877737‑M2/5‑100 (MQ=255)

                                                                                                ggcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTg     <  1:2820455‑M2/97‑1 (MQ=255)

                                                                                                 gcACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTgg    <  2:3474200‑M2/98‑1 (MQ=255)

                                                                                                 gCACGATCACAGGACATTAGATCTCGTCCCCATACTCAAATTTATGGTTATTACCGTGGAAATGCTGGTCCATATTCATTGATGGCTTATTGCTGTCTg     <  1:3263680/99‑1 (MQ=255)

                                                                                                  cACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTg     <  1:3151406‑M2/97‑1 (MQ=255)

                                                                                                  cACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGt   >  1:576918‑M2/2‑100 (MQ=255)

                                                                                                  cACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGt   >  2:702352‑M2/2‑100 (MQ=255)

                                                                                                   aCGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGtt  <  2:409334/100‑1 (MQ=255)

                                                                                                   aCGATAAGATGACGTTAGCTCCTATCTCCCTACTCAAATGTATGGTTATGTCGGTTGAAATGCTGGTCCTTATCCATTGATGGCGTTTCGCTGTCTGGtt  <  1:3519202/100‑1 (MQ=255)

GGTAGTGGTGTATGAAGCCTGGCGGCAGTTGGGGTATCCGGGAGCGGTATTGAGAGATTAGTTACTGTAGGCCGGATAGATGATTACATCGCATCCGGCACGATCACAGGACATTAGATCCCATCCCCATACTCAAATGTATGGTTAATACCGTTGAAATGCTGGTCCATATCCATTGATGGCTTATCGCTGTCTGGTT  >  NC_000913/3781628‑3781826

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.