BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4103511 =	NA (NA)	11 (0.090)	7/164	NT	NA	noncoding (5/84 nt)	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	4103544 =	NA (NA)	11 (0.090)	7/164	NT	NA	noncoding (38/84 nt)	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP301 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 212 total aligned reads displayed.

CGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTA  >  NC_000913/4103446‑4103642

gagttaaacttcgcatttgcaggcaggataaggcgtttacgccgcatccggcatttgagcaggatGCCTGATAAGACGCTATCAGCGTCGCATCAGGCAt                                                                                                   >  1:2401818‑M1/66‑100 (MQ=255)

gagttaaacttcgcatttgcaggcaggataaggcgtttacgccgcatccggcatttgagcaggatGCCTGATAAGACGCTATCAGCGTCGCATCAGGCAt                                                                                                   >  2:1373148‑M1/66‑100 (MQ=255)

  aCTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATcc                                                                                                 <  2:882680/100‑1 (MQ=255)

     gAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCACATCAGGCATCCTGc                                                                                              >  2:3795108/1‑100 (MQ=255)

       gCGGCAAGATCGAAGATTTTTCCCTCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                            <  1:2213624/100‑1 (MQ=255)

       gCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                            >  2:1492510/1‑100 (MQ=255)

       gCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                            <  2:2252292/100‑1 (MQ=255)

        cGGCAAGATCGGAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCa                                                                                           >  1:1869553/1‑100 (MQ=255)

        cGGCAAGATCGAAGCTTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGGGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                            <  2:2646210/99‑1 (MQ=255)

        cGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCa                                                                                           >  2:2149123/1‑100 (MQ=255)

        cGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCa                                                                                           >  2:3738881/1‑100 (MQ=255)

          gCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCaaa                                                                                         >  2:739854/1‑100 (MQ=255)

            aaGATCGAAGATGTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTTTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTc                                                                                            <  1:3119042/95‑1 (MQ=255)

              gATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCCGGCATCCTGCTCaaa                                                                                         >  1:1063779/1‑96 (MQ=255)

              gATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGcc                                                                                     <  1:3328499/100‑1 (MQ=255)

               aTCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCg                                                                                    <  1:3050641/100‑1 (MQ=255)

               aTCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCg                                                                                    <  2:3141280/100‑1 (MQ=255)

                tCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCgg                                                                                   <  2:2972437/100‑1 (MQ=255)

                tCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCgg                                                                                   >  2:3440614/1‑100 (MQ=255)

                 cGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGa                                                                                  >  2:1124943/1‑100 (MQ=255)

                  gAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGAt                                                                                 >  2:3638170/1‑100 (MQ=255)

                       tttttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTTATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcgg                                                                             <  1:2513524/99‑1 (MQ=255)

                        ttttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcggcg                                                                           <  2:1071053/100‑1 (MQ=255)

                        ttttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcggcg                                                                           >  2:2424456/1‑100 (MQ=255)

                        ttttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATgcggcg                                                                           <  1:3177123/100‑1 (MQ=255)

                          ttCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTa                                                                         <  1:1386386/100‑1 (MQ=255)

                             ccgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAAc                                                                      >  2:3553731/1‑100 (MQ=255)

                              cgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACg                                                                     <  2:2475149/100‑1 (MQ=255)

                              cgccgGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACg                                                                     >  2:644687/1‑100 (MQ=255)

                                   gTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAACCGCCTTa                                                                <  1:2023142/100‑1 (MQ=255)

                                   gTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTa                                                                <  1:1598272/100‑1 (MQ=255)

                                   gTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTa                                                                <  1:1294688/100‑1 (MQ=255)

                                   gTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTa                                                                <  2:2688874/100‑1 (MQ=255)

                                        ggggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctg                                                           >  2:1958937/1‑100 (MQ=255)

                                          ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGTCGTAAACGCCTTATcctgcc                                                         <  1:2349672/100‑1 (MQ=255)

                                          ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                         >  2:585437/1‑100 (MQ=255)

                                          ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                         >  2:917221/1‑100 (MQ=255)

                                          ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                         >  1:1017029/1‑100 (MQ=255)

                                          ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                         <  2:3269151/100‑1 (MQ=255)

                                          ggAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgc                                                          >  1:2403915/1‑99 (MQ=255)

                                          atctaaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcc                                                         <  2:1545214/96‑1 (MQ=255)

                                           gAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcct                                                        >  1:536375/1‑100 (MQ=255)

                                           gAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgcct                                                        >  1:2850388/1‑100 (MQ=255)

                                              aaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATcctgccagat                                                     >  1:1545201/1‑96 (MQ=255)

                                              aaTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCa                                                     <  2:1858616/100‑1 (MQ=255)

                                               aTAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCATGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCaa                                                    >  1:1273931/1‑100 (MQ=255)

                                                tAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCCTCCTGCTCAAATGCCGGATGCAGCGTAAACGCCTTATCCTCCCTGCaaa                                                   >  1:1250059/1‑100 (MQ=255)

                                                  aCCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATg                                                 >  1:888206/1‑100 (MQ=255)

                                                   cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGc                                                >  1:3828568/1‑100 (MQ=255)

                                                   cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGc                                                >  2:3191175/1‑100 (MQ=255)

                                                   cccccGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGc                                                >  1:625432/1‑100 (MQ=255)

                                                     tttgagcaggatgcctgatgcgacgctgatagcgtcttatcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGa                                              >  2:201531‑M2/46‑100 (MQ=255)

                                                       cGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAg                                            <  1:3744751/100‑1 (MQ=255)

                                                       cGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAg                                            <  2:260954/100‑1 (MQ=255)

                                                       cGGAGTGTAGGCCTGATAAGACGCTAGCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAg                                            <  1:1764036/100‑1 (MQ=255)

                                                        ggAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGt                                           <  2:1775885/100‑1 (MQ=255)

                                                           gtgtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTa                                        <  1:1772406/100‑1 (MQ=255)

                                                           caggatgcctgatgcgacgctgatagcgtcttatcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTa                                        >  1:2613415‑M2/40‑100 (MQ=255)

                                                           caggatgcctgatgcgacgctgatagcgtcttatcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTa                                        >  2:2074873‑M2/40‑100 (MQ=255)

                                                            tgtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTaa                                       >  2:451823/1‑100 (MQ=255)

                                                             gtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAAc                                      >  1:1993271/1‑100 (MQ=255)

                                                             gtAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAAc                                      <  2:80778/100‑1 (MQ=255)

                                                              tAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACt                                     >  2:1576258/1‑100 (MQ=255)

                                                              tAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACt                                     <  2:2365104/100‑1 (MQ=255)

                                                                ggCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCGGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTcc                                   >  1:567360/1‑100 (MQ=255)

                                                                 GCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACtccn                                  >  2:2748506‑M1/1‑99 (MQ=255)

                                                                 GCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCg                                  <  2:122591‑M1/100‑1 (MQ=255)

                                                                  caTGATAGGACGGTATCAGTGTCGAATCAGGCATCCTGCTCATATGCCGGATGCGGTGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGc                                 >  1:147066‑M1/3‑100 (MQ=255)

                                                                  CCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGc                                 <  1:776884‑M1/100‑1 (MQ=255)

                                                                   CTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCt                                >  1:1576245‑M1/1‑100 (MQ=255)

                                                                   CTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCt                                >  1:2989128‑M1/1‑100 (MQ=255)

                                                                    TGATAAGACGCTATCGGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCtt                               >  1:85186‑M1/1‑100 (MQ=255)

                                                                    TGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCtt                               <  2:564510‑M1/100‑1 (MQ=255)

                                                                    TGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCtt                               <  2:86064‑M1/100‑1 (MQ=255)

                                                                     GATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTta                              <  2:2020259‑M1/100‑1 (MQ=255)

                                                                     GATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTta                              <  2:303946‑M1/100‑1 (MQ=255)

                                                                     GATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTta                              >  1:3440589‑M1/1‑100 (MQ=255)

                                                                       TAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTtata                            >  1:2449408‑M1/1‑100 (MQ=255)

                                                                        aaGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATAc                           <  1:3553705/100‑1 (MQ=255)

                                                                        aaGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATAc                           <  1:7931/100‑1 (MQ=255)

                                                                         aGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACa                          <  1:1770637/100‑1 (MQ=255)

                                                                          gACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAg                         >  2:3330279/1‑100 (MQ=255)

                                                                           aCGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGc                        <  1:441457/100‑1 (MQ=255)

                                                                            cGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAgtg                       <  2:330601/100‑3 (MQ=255)

                                                                              cTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGc                     >  2:3004035/1‑100 (MQ=255)

                                                                               tATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCa                    >  1:406582/1‑100 (MQ=255)

                                                                               tATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCa                    <  2:1997911/100‑1 (MQ=255)

                                                                                aTCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCaa                   >  2:358558/1‑100 (MQ=255)

                                                                                 tCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAAc                  <  1:3376273/100‑1 (MQ=255)

                                                                                       tCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATc            >  2:3201005/1‑100 (MQ=255)

                                                                                        cGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCa           <  1:3638144/100‑1 (MQ=255)

                                                                                        cGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCa           <  1:979171/100‑1 (MQ=255)

                                                                                           atcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCa        >  1:2764331‑M2/8‑100 (MQ=255)

                                                                                            tcaggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATAACCa        >  1:2895071‑M2/7‑99 (MQ=255)

                                                                                             caggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGGTTAACGCCGCTTATACAGCGGCAACCAAATCACCAGc      >  1:2599550‑M2/6‑100 (MQ=255)

                                                                                              aggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGcc     >  2:3769643‑M2/5‑100 (MQ=255)

                                                                                               ggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAATCAAATCACCAGCCg    <  1:2551364‑M2/97‑1 (MQ=255)

                                                                                               ggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCg    >  1:3509983‑M2/4‑100 (MQ=255)

                                                                                               ggcATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCg    <  2:1399568‑M2/97‑1 (MQ=255)

                                                                                                 cATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTa  >  1:801733‑M2/2‑100 (MQ=255)

CGACTGAGCGGCAAGATCGAAGATTTTTCCCGCCGGTTGTGGGGAAAATAACCCCCGGAGTGTAGGCCTGATAAGACGCTATCAGCGTCGCATCAGGCATCCTGCTCAAATGCCGGATGCGGCGTAAACGCCTTATCCTGCCTGCAAATGCGAAGTTTAACTCCGCTTATACAGCGGCAACCAAATCACCAGCCGTA  >  NC_000913/4103446‑4103642

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.