BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4171803	108 (0.780)	34 (0.250)	9/174	NT	24.4%	intergenic (+47/‑254)	rrfB/murB	5S ribosomal RNA of rrnB operon/UDP‑N‑acetylenolpyruvoylglucosamine reductase, FAD‑binding
*	?	NC_000913	= 4213162	NA (NA)	34 (0.250)	9/174	NT	24.4%	intergenic (+3/‑72)	rrfE/yjaA	5S ribosomal RNA of rrnE operon/stress‑induced protein

Only 100 of 171 total aligned reads displayed.

ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTC  >  NC_000913/4213068‑4213261

aCCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAg                                                                                                <  1:1166930/100‑1 (MQ=11)

 ccTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGa                                                                                               >  2:3475699/1‑100 (MQ=31)

   tGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaa                                                                                             >  2:2280911/1‑100 (MQ=33)

     aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaaa                                                                                           >  2:86094/1‑100 (MQ=35)

     aCCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGaaaaa                                                                                           >  2:3168729/1‑100 (MQ=35)

      ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAc                                                                                          >  1:1227525/1‑100 (MQ=38)

      ccccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAc                                                                                          >  2:703358/1‑100 (MQ=38)

       cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAcc                                                                                         >  2:3037648/1‑100 (MQ=38)

       cccATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAAcc                                                                                         >  2:3031949/1‑100 (MQ=38)

            gCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGt                                                                                    <  1:1361950/100‑1 (MQ=255)

            gCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGt                                                                                    >  1:2994334/1‑100 (MQ=255)

              cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGTGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTcc                                                                                  >  2:733722/1‑100 (MQ=255)

              cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTcc                                                                                  >  2:2706401/1‑100 (MQ=255)

              cGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTcc                                                                                  >  2:164361/1‑100 (MQ=255)

               gcaCTCCGAAGATAAACGCCGTAGCATTGATGGTAGTGTGGAGGCCCCCCATGCGAGAGTAGGGAGCAGTCGACCATCAAATTAGAAAAACCCCGGCCCa                                                                                 <  1:2982298/98‑1 (MQ=9)

                aaCTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGAAAAAAAAAAAAAAAAACCCCgg                                                                                     <  1:154467/95‑1 (MQ=11)

                 aCTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATa                                                                               >  1:2443033/1‑100 (MQ=255)

                  cTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCACCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCAt                                                                                >  1:962662/1‑98 (MQ=255)

                    cAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAgg                                                                            <  1:2501748/100‑1 (MQ=255)

                    cAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAgg                                                                            >  1:908940/1‑100 (MQ=255)

                    cAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAgg                                                                            >  1:2497202/1‑100 (MQ=255)

                     aGAAGTGAAACGCGGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGc                                                                           >  1:2801824/1‑100 (MQ=255)

                     aGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGc                                                                           >  2:951663/1‑100 (MQ=255)

                      gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGcc                                                                          >  1:287562/1‑100 (MQ=255)

                      gAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGcc                                                                          >  2:907434/1‑100 (MQ=255)

                        aGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCgg                                                                        >  2:1485253/1‑100 (MQ=255)

                         gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCggg                                                                       <  2:2441041/100‑1 (MQ=255)

                         gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCggg                                                                       >  1:3556750/1‑100 (MQ=255)

                         gTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCggg                                                                       >  2:1998574/1‑100 (MQ=255)

                          tGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCgggg                                                                      <  2:615491/100‑1 (MQ=255)

                           gAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGt                                                                     <  2:2073411/100‑1 (MQ=255)

                             aaCGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGCGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGACGGGGttt                                                                   >  1:621805/1‑100 (MQ=255)

                                  cGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAGACCCCGGTCCATAAGGCCGGGGTTTTTTGc                                                              <  1:3824692/100‑1 (MQ=255)

                                  cGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGAGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGc                                                              <  1:3118618/100‑1 (MQ=255)

                                   gTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCTGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCa                                                             >  1:3818951/1‑100 (MQ=255)

                                    tAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCat                                                            <  2:2397228/100‑1 (MQ=255)

                                     aGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGATCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCata                                                           <  2:2363827/100‑1 (MQ=255)

                                      gcgcCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCatat                                                          >  2:3108000/1‑100 (MQ=255)

                                       cgcCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATc                                                         >  2:152715/1‑100 (MQ=255)

                                       caccGATGGTAGTATGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATc                                                         >  2:2597817/3‑100 (MQ=255)

                                        gcCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCAGGTCCATAAGGCCGGGGTTTTTTGCATATCa                                                        >  1:1659540/1‑100 (MQ=255)

                                         ccGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCata                                                           <  1:156320/96‑1 (MQ=255)

                                          cGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCaa                                                       <  1:102151/99‑1 (MQ=255)

                                          cGATGGTAGTGTGGGGACTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGGCCATAAGGCCGGAGTTTTTTGCATATCAat                                                      >  1:3305589/1‑100 (MQ=255)

                                              ggTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAattatt                                                  >  2:858306/1‑100 (MQ=255)

                                               gTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTAttt                                                 >  2:2640151/1‑100 (MQ=255)

                                                tAGTGTGGGGTCTCCCCATGCGAGAGTAGGTAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTg                                                <  1:3229570/100‑1 (MQ=255)

                                                tAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTg                                                <  1:1122616/100‑1 (MQ=255)

                                                tAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTg                                                <  1:340861/100‑1 (MQ=255)

                                                tAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTg                                                >  2:2526908/1‑100 (MQ=255)

                                                tAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTg                                                <  1:1385429/100‑1 (MQ=255)

                                                  gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCa                                              >  1:494320/1‑100 (MQ=255)

                                                  gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCa                                              <  1:2892403/100‑1 (MQ=255)

                                                  gtgtGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCa                                              <  1:3168705/100‑1 (MQ=255)

                                                   tgtgGGGTCTCCCCATGCGAGAGTAGGGAGCTGCCAGGTATCAAATTAGAAAAACCCCTGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCat                                             <  1:3362459/100‑1 (MQ=255)

                                                   tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCat                                             <  2:1552023/100‑1 (MQ=255)

                                                   tgtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCat                                             <  2:3553426/100‑1 (MQ=255)

                                                    gtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCatg                                            >  2:693536/1‑100 (MQ=255)

                                                    gtgGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCatg                                            <  1:2675121/100‑1 (MQ=255)

                                                           ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                     <  2:3769785/100‑1 (MQ=255)

                                                           ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                     <  2:1755503/100‑1 (MQ=255)

                                                           ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                     <  1:273436/100‑1 (MQ=255)

                                                           ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                     >  2:2867485/1‑100 (MQ=255)

                                                           ctcCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAgg                                     <  2:2850234/100‑1 (MQ=255)

                                                             ccccATGCGAGAGTAGGGAACTGCCAGGCATCAATTTAGAAAAACCCCGGTCCATAAGGCCGGGGTTGTTTGCATATCAATTATTTGCATGATGAAGGGa                                   <  1:2626484/100‑1 (MQ=255)

                                                             ccccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGa                                   >  2:1156182/1‑100 (MQ=255)

                                                              cccATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGaa                                  <  2:1000509/100‑1 (MQ=255)

                                                                 aTGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtct                               >  2:294453/1‑100 (MQ=255)

                                                                  tGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAAtctc                              >  1:1191840/1‑100 (MQ=255)

                                                                    cGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCAt                            >  2:478327/1‑100 (MQ=255)

                                                                      agagTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGt                          >  1:1980533/1‑100 (MQ=255)

                                                                       gagTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTc                         >  1:1018506/1‑100 (MQ=255)

                                                                        atgaGGAAACTGCCAGGCATCAAACGAGAAAAACCCCAGTTCATAAGGCCGTGGTTTTTTTCATATCAATTATTTGCATGATCAACTGAATCTAATGTc                         <  1:2377100/96‑1 (MQ=255)

                                                                        agTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCa                        >  2:3390004/1‑100 (MQ=255)

                                                                         gTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAg                       >  2:2863293/1‑100 (MQ=255)

                                                                            gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTc                    >  1:3725381/1‑100 (MQ=255)

                                                                            gggAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTc                    >  2:3773355/1‑100 (MQ=255)

                                                                              gAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCGATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTg                  <  1:2370038/100‑1 (MQ=255)

                                                                              gAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTg                  <  2:1028007/100‑1 (MQ=255)

                                                                              gAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTg                  >  2:1673684/1‑100 (MQ=255)

                                                                               aaCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGt                 <  1:1596169/100‑1 (MQ=255)

                                                                               aaCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGt                 <  2:1382240/100‑1 (MQ=255)

                                                                                aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGta                <  2:1850442/100‑1 (MQ=255)

                                                                                aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGta                <  2:1206191/100‑1 (MQ=255)

                                                                                aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGta                <  2:3315768/100‑1 (MQ=255)

                                                                                aCTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGta                <  1:1878858/100‑1 (MQ=255)

                                                                                  tGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGtata              <  2:3543844/100‑1 (MQ=255)

                                                                                   gCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTatat             >  2:3689135/1‑100 (MQ=255)

                                                                                   gCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTatat             >  1:1821225/1‑100 (MQ=255)

                                                                                   gCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTatat             >  2:1231119/1‑100 (MQ=255)

                                                                                     cAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTATGTATATc            >  2:1607466/1‑99 (MQ=255)

                                                                                        gCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCaaa        >  2:269442/1‑100 (MQ=255)

                                                                                         cATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTACTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCaaa        >  1:3400920/1‑99 (MQ=255)

                                                                                          aTCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAAtt      >  1:1887170/1‑100 (MQ=255)

                                                                                          aTCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAAtt      >  2:2987212/1‑100 (MQ=255)

                                                                                          aTCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATATGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAAtt      >  1:602930/1‑100 (MQ=255)

                                                                                           tCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtc     >  1:205479/1‑100 (MQ=255)

                                                                                           tCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtc     >  1:2707405/1‑100 (MQ=255)

                                                                                           tCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATtc     >  2:2492871/1‑100 (MQ=255)

                                                                                            cAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTTCATGATGACAGGAATCTCATGTCAGTTATGTATATCCAAAtttg    >  1:3259671/1‑98 (MQ=255)

ACCTGACCCCATGCCGAACTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGGGAACTGCCAGGCATCAAATTAGAAAAACCCCGGTCCATAAGGCCGGGGTTTTTTGCATATCAATTATTTGCATGATGAAGGGAATCTCATGTCAGTTCTGTATATCCAAATTCGTC  >  NC_000913/4213068‑4213261

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.