New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4440123 =138 (1.000)9 (0.070) 5/168 NT 6.8% coding (1093/1344 nt) ytfL UPF0053 family inner membrane protein
?NC_000913 4440152 = 117 (0.900)coding (1064/1344 nt) ytfL UPF0053 family inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 162 total aligned reads displayed.

AACATCATAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGA  >  NC_000913/4440053‑4440251
                                                                                                   |                                                                                                   
aaCATCATAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGACGCCaa                                                                                                     >  2:1670163/1‑100 (MQ=255)
  atgggcgatctggtcggtcaggggctggaagagcagattgtcgcccgtgatgagaactcatggctgatTGACGTCGTCAATTGGGGTGCCGCCGTCAATc                                                                                                   >  1:1498472‑M1/69‑100 (MQ=255)
    tcatAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAg                                                                                                 >  1:3362838/1‑100 (MQ=255)
    tcatAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAg                                                                                                 <  2:2523700/100‑1 (MQ=255)
     catAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGc                                                                                                >  1:16636/1‑100 (MQ=255)
      atAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGcc                                                                                               <  2:1540311/100‑1 (MQ=255)
      atAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGcc                                                                                               <  2:1244927/100‑1 (MQ=255)
       tAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGcc                                                                                               >  1:1938854/1‑99 (MQ=255)
       tAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCa                                                                                              >  2:1011238/1‑100 (MQ=255)
       tAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCa                                                                                              >  1:711549/1‑100 (MQ=255)
       tAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCa                                                                                              >  1:956345/1‑100 (MQ=255)
        aaaGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCAt                                                                                             <  1:2201046/100‑1 (MQ=255)
         aaGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATg                                                                                            <  2:3114470/100‑1 (MQ=255)
         aaGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATg                                                                                            >  1:2557274/1‑100 (MQ=255)
           gccgccGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAg                                                                                          <  1:1151071/100‑1 (MQ=255)
           gccgccGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAg                                                                                          <  1:3325423/100‑1 (MQ=255)
             cgccgATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGtt                                                                                        >  1:611346/1‑100 (MQ=255)
                 ggtGGTTGCGTAGTTGCCCGACTGCGGGAACTCGTCAAGATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCtca                                                                                    <  1:1196631/98‑1 (MQ=255)
                 gATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCTATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCtca                                                                                    <  2:2722599/100‑1 (MQ=255)
                   tGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCtcatc                                                                                  >  2:2075133/1‑100 (MQ=255)
                     gTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCAc                                                                                >  2:2241851/1‑100 (MQ=255)
                     gTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCAc                                                                                >  2:887475/1‑100 (MQ=255)
                     gTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCAc                                                                                <  2:3362862/100‑1 (MQ=255)
                       ttCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACgg                                                                              >  2:1481149/1‑100 (MQ=255)
                        tCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACggg                                                                             <  1:1177037/100‑1 (MQ=255)
                         cGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGc                                                                            <  1:2823036/100‑1 (MQ=255)
                         cGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGc                                                                            <  2:578758/100‑1 (MQ=255)
                         cGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGc                                                                            <  2:2145061/100‑1 (MQ=255)
                         cGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGc                                                                            <  2:1800044/100‑1 (MQ=255)
                                ncccGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATc                                                                     >  1:3531198/2‑100 (MQ=255)
                                  ccGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTg                                                                   <  2:3468632/100‑1 (MQ=255)
                                   cGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGc                                                                  <  2:530688/100‑1 (MQ=255)
                                    gACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGct                                                                 <  1:679119/100‑1 (MQ=255)
                                       tGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGCCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGctct                                                               <  1:2113320/99‑1 (MQ=255)
                                        gggggAGCTCGTCAAGCTCCATCACGCGCATGGCGTCGAAAATTGGTGTGCCGCCTTCAATCAGCCATGAGTTCTCATCACGCGCGACAATCCGCTCTTc                                                             <  1:2208302/98‑1 (MQ=255)
                                         cGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTcc                                                            >  1:2770939/1‑100 (MQ=255)
                                          gggAACTCGTCAATATCCCACCCGCGCATGACGCCGTCAATTGGGGTGCCACAGTCAATCAGCCATGCGTTCTTCTTATGGCCGACCATCCGCTCTTCCa                                                           >  1:3628223/1‑100 (MQ=255)
                                           ggAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAg                                                          >  2:370697/1‑100 (MQ=255)
                                           ggAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAg                                                          <  2:824882/100‑1 (MQ=255)
                                             aaCTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGcc                                                        <  2:3259264/100‑1 (MQ=255)
                                               cTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGcccc                                                      >  2:1621714/1‑100 (MQ=255)
                                               cTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGcccc                                                      <  2:711556/100‑1 (MQ=255)
                                               cTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGcccc                                                      >  1:594524/1‑100 (MQ=255)
                                               cTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGcccc                                                      >  2:2554804/1‑100 (MQ=255)
                                                 cGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTg                                                    >  2:2404780/1‑100 (MQ=255)
                                                  gtaaaTATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGACGTGAATCAGCGATGAGTTCTCATCACGGGAGACAATCTGATTTTCCAGCCTCTga                                                   >  1:930258/4‑100 (MQ=255)
                                                  gTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTga                                                   >  2:2015463/1‑100 (MQ=255)
                                                  gTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTga                                                   >  2:422331/1‑100 (MQ=255)
                                                   tCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgac                                                  <  1:459070/100‑1 (MQ=255)
                                                   tCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgac                                                  <  2:1784969/100‑1 (MQ=255)
                                                    cAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgacc                                                 >  1:3530103/1‑100 (MQ=255)
                                                    cAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgacc                                                 <  2:3429156/100‑1 (MQ=255)
                                                     aaTATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgaccg                                                <  2:594532/100‑1 (MQ=255)
                                                       tatCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgaccgac                                              <  1:805063/100‑1 (MQ=255)
                                                        atCCAGCACGCGCATGACGTCGTCAATTGGGGTGCGGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTgaccgacc                                             <  2:1073047/100‑1 (MQ=255)
                                                         tCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCa                                            <  1:510792/100‑1 (MQ=255)
                                                          ccAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAg                                           >  2:951857/1‑100 (MQ=255)
                                                          ccAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACAGACCAg                                           >  1:3016831/1‑100 (MQ=255)
                                                             gCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATc                                        <  2:488216/100‑1 (MQ=255)
                                                               aCGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGc                                      <  2:894911/100‑1 (MQ=255)
                                                                  cgcATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCa                                   <  1:3142631/100‑1 (MQ=255)
                                                                   gattgacggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCAt                                  >  1:1498472‑M2/33‑100 (MQ=255)
                                                                     aTGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCa                                <  2:3504383/100‑1 (MQ=255)
                                                                      tgacggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAg                               >  1:2080540‑M2/30‑100 (MQ=255)
                                                                      tgacggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAg                               >  1:136768‑M2/30‑100 (MQ=255)
                                                                      TGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGGCAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAg                               <  1:3660560‑M1/100‑1 (MQ=255)
                                                                       gacggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGc                              >  2:2820578‑M2/29‑100 (MQ=255)
                                                                       gacggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGc                              >  1:2888831‑M2/29‑100 (MQ=255)
                                                                        acggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCg                             >  1:2974793‑M2/28‑100 (MQ=255)
                                                                        acggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCg                             <  2:136772‑M2/73‑1 (MQ=255)
                                                                        acggcggcaccccaattgacgacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCg                             >  2:3100190‑M2/28‑100 (MQ=255)
                                                                          GTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTg                           >  2:508104‑M1/1‑100 (MQ=255)
                                                                          GTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTg                           >  2:1504767‑M1/1‑100 (MQ=255)
                                                                           tcgtcAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTgg                          >  2:2884705/1‑100 (MQ=255)
                                                                            cgtcAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGt                         >  1:3445531/1‑100 (MQ=255)
                                                                            cgtcAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGt                         <  1:2922829/100‑1 (MQ=255)
                                                                            cgtcAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGt                         >  2:387194/1‑100 (MQ=255)
                                                                             gtcAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtc                        >  1:825015/1‑100 (MQ=255)
                                                                             gtcAATTGGGGTGCCGCCGTCAATCAGACATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCTACCAGATCACCCATCAGCGTgg                          >  1:1849585/1‑98 (MQ=255)
                                                                               cAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcat                      >  2:3086778/1‑100 (MQ=255)
                                                                                aaTTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatc                     <  1:3147194/100‑1 (MQ=255)
                                                                                 aTTGGGGTGCCGCGGTCAATCAGCCATGAGTTCTCATCTCGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGtcatca                    >  1:2376703/1‑100 (MQ=255)
                                                                                   tGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACg                  <  1:1513657/100‑1 (MQ=255)
                                                                                   tGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACg                  <  1:2345961/100‑1 (MQ=255)
                                                                                   tGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACg                  <  2:3551228/100‑1 (MQ=255)
                                                                                      ggTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCa               <  2:1193416/100‑1 (MQ=255)
                                                                                       gTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCAt              <  2:1418459/100‑1 (MQ=255)
                                                                                        tGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCAtt             <  2:1277359/100‑1 (MQ=255)
                                                                                         gccgccGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTg            >  2:1911038/1‑100 (MQ=255)
                                                                                         cttccgatctaTCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTg            <  2:3254421/90‑1 (MQ=255)
                                                                                            gccgTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAgg         >  1:2903011/1‑100 (MQ=255)
                                                                                            gacgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAgg         <  2:2523380‑M2/93‑1 (MQ=255)
                                                                                             ccgTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGATCAGATCGCCCATCAGCTTGGTCATTACGTCATTGAggg        <  1:2386559/100‑1 (MQ=255)
                                                                                             ccgTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAggg        <  1:1142532/100‑1 (MQ=255)
                                                                                              cgtcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGt       <  2:775861‑M2/95‑1 (MQ=255)
                                                                                                tcaATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGTCCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGtga     <  1:2137913‑M2/97‑1 (MQ=255)
                                                                                                  aATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGtgatg   >  2:414915‑M2/2‑100 (MQ=255)
                                                                                                   aTCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAgatcggaag  >  1:3254397/1‑92 (MQ=255)
                                                                                                   aTCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGtgatga  >  2:2636218/1‑100 (MQ=255)
                                                                                                   aTCAGCCATGAGTTCTCATCACGCGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACCTCATTGAGGGtgacga  >  1:151035/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
AACATCATAAAGCCGCCGATGGTTTCGTAGTTGCCCGACTGCGGGAACTCGTCAATATCCAGCACGCGCATGACGTCGTCAATTGGGGTGCCGCCGTCAATCAGCCATGAGTTCTCATCACGGGCGACAATCTGCTCTTCCAGCCCCTGACCGACCAGATCGCCCATCAGCGTGGTCATCACGTCATTGAGGGTGATGA  >  NC_000913/4440053‑4440251

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.