BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4554385 =	153 (1.110)	10 (0.080)	8/160	NT	7.2%	intergenic (+24/‑191)	uxuB/uxuR	D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor
*	?	NC_000913	4554419 =	121 (0.970)	10 (0.080)	8/160	NT	7.2%	intergenic (+58/‑157)	uxuB/uxuR	D‑mannonate oxidoreductase, NAD‑dependent/fructuronate‑inducible hexuronate regulon transcriptional repressor; autorepressor
Rejected: Frequency below cutoff threshold.

Only 100 of 184 total aligned reads displayed.

TGTGCGAACGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAG  >  NC_000913/4554321‑4554518

tgtgCGAACGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGttt                                                                                                    >  1:1472918/1‑100 (MQ=255)

   gCGAACGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTATCCTACAGACTTTCTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCg                                                                                                 <  1:2439996/100‑1 (MQ=255)

    atctcaaactataccattagcactggaagttggcacgtacaggtgggcaaaaaaacgaaaACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGt                                                                                                >  1:2781876‑M1/61‑100 (MQ=255)

     tctcaaactataccattagcactggaagttggcacgtacaggtgggcaaaaaaacgaaaACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGtt                                                                                               >  1:1347131‑M1/60‑100 (MQ=255)

       aCGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCATACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTATTCGtt                                                                                               >  1:1793003/1‑98 (MQ=255)

            gTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGc                                                                                        <  1:2280036/100‑1 (MQ=255)

            gTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGc                                                                                        <  1:3397828/100‑1 (MQ=255)

              gcgcgcGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGccc                                                                                      <  2:1191655/100‑1 (MQ=255)

                 cgcgAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCAcc                                                                                   >  2:699208/1‑100 (MQ=255)

                 cgcgAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCAcc                                                                                   <  1:1212050/100‑1 (MQ=255)

                  gcgAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTCCAGACTTACTGGTCAATCAAACTGCTATTTGGGTGACCAGTTTTCGTTTTTTTTCCCACCt                                                                                  >  2:1367721/1‑100 (MQ=255)

                         tgtgGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTg                                                                           <  2:1320063/100‑1 (MQ=255)

                          gtgGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGc                                                                          >  2:1519296/1‑100 (MQ=255)

                          gtgGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGc                                                                          >  1:2608940/1‑100 (MQ=255)

                          gtgGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGc                                                                          >  2:370410/1‑100 (MQ=255)

                           tgGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGcc                                                                         <  1:3343722/100‑1 (MQ=255)

                            ggCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCa                                                                        >  1:922693/1‑100 (MQ=255)

                            ggCTGCGCTGTAACTAACTAATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGATTTCGTTTTTTTGCCCACCTGTACGTg                                                                           >  1:2162955/1‑97 (MQ=255)

                             gCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCaa                                                                       >  2:287913/1‑100 (MQ=255)

                               tGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACt                                                                     <  2:3084928/100‑1 (MQ=255)

                                gcgcTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACtt                                                                    >  2:1967591/1‑100 (MQ=255)

                                   cTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCa                                                                 >  2:1145342/1‑100 (MQ=255)

                                   cTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCa                                                                 >  1:1699768/1‑100 (MQ=255)

                                     gTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGt                                                               >  2:2414967/1‑100 (MQ=255)

                                     gTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACATGCCAACTTCCAGt                                                               <  1:488791/100‑1 (MQ=255)

                                     gTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACATGCCAACTTCCAGt                                                               <  1:2911320/100‑1 (MQ=255)

                                        actaactGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCt                                                            <  2:638202/100‑1 (MQ=255)

                                         ctaactGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTa                                                           >  2:1868178/1‑100 (MQ=255)

                                          taactGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTaa                                                          >  1:1940482/1‑100 (MQ=255)

                                            actGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATg                                                        <  1:104409/100‑1 (MQ=255)

                                             ctGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATgg                                                       <  2:922700/100‑1 (MQ=255)

                                             ctGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATgg                                                       >  1:541029/1‑100 (MQ=255)

                                               gATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGta                                                     >  1:3791293/1‑100 (MQ=255)

                                                aTTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGtat                                                    <  1:1967575/100‑1 (MQ=255)

                                                 ttACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGtata                                                   >  1:327110/1‑100 (MQ=255)

                                                  gcaaaaaaacgaaaactggtcaaccaaatatcagtttgattgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAg                                                  >  1:2136128‑M2/49‑100 (MQ=255)

                                                    cccTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCATCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGtt                                                <  2:2723116/100‑1 (MQ=255)

                                                    cccTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGtt                                                >  1:2269076/1‑100 (MQ=255)

                                                     ncTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGttt                                               >  2:2176389/2‑100 (MQ=255)

                                                      cTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTg                                              >  2:425309/1‑100 (MQ=255)

                                                      cTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTg                                              >  2:1763376/1‑100 (MQ=255)

                                                      cTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTg                                              >  2:1763340/1‑100 (MQ=255)

                                                       tACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTga                                             <  2:3277749/100‑1 (MQ=255)

                                                        aCAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTgag                                            <  2:280902/100‑1 (MQ=255)

                                                        aCAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTgag                                            <  1:2760544/100‑1 (MQ=255)

                                                         cAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTgaga                                           <  1:1868165/100‑1 (MQ=255)

                                                         cAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTgaga                                           >  1:1038516/1‑100 (MQ=255)

                                                         aacgaaaactggtcaaccaaatatcagtttgattgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTgaga                                           >  1:1347131‑M2/42‑100 (MQ=255)

                                                          acgaaaactggtcaaccaaatatcagtttgattgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGAt                                          >  2:726432‑M2/41‑100 (MQ=255)

                                                          acgaaaactggtcaaccaaatatcagtttgattgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGAt                                          >  1:2781876‑M2/41‑100 (MQ=255)

                                                          acgaaaactggtcaaccaaatatcagtttgattgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGAt                                          >  2:553315‑M2/41‑100 (MQ=255)

                                                          aGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGAt                                          >  2:952796/1‑100 (MQ=255)

                                                           gACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGAtt                                         >  1:562441/1‑100 (MQ=255)

                                                            gaaaactggtcaaccaaataccagtttgattgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTa                                        >  1:2355358‑M2/39‑100 (MQ=255)

                                                              ttACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTTCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAAc                                      >  1:1774389/1‑100 (MQ=255)

                                                              ttACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAAc                                      <  2:2465617/100‑1 (MQ=255)

                                                               tACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACg                                     >  2:3191985/1‑100 (MQ=255)

                                                               tACTGGGCAATCAAACTGATATTTGGTTGAGCAGTTTTCGTTTTTTTGTGCACCTGTACGTGCCAACTGCCAGTGCTCATGGTATAGTTTGAGATTa                                        >  1:765094/1‑97 (MQ=255)

                                                                   GGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACggggg                                 <  2:604241‑M1/100‑1 (MQ=255)

                                                                   GGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACggggg                                 >  2:341794‑M1/1‑100 (MQ=255)

                                                                   GGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACggggg                                 <  2:1795066‑M1/100‑1 (MQ=255)

                                                                   GGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACggggg                                 <  2:3271351‑M1/100‑1 (MQ=255)

                                                                   GGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTCTGAGATTAACggggg                                 <  2:3803758‑M1/100‑1 (MQ=255)

                                                                    GTCAATCAAACTGATATGTGGTTGTCCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGc                                >  1:1612561‑M1/1‑100 (MQ=255)

                                                                      CAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCg                              >  1:1077564‑M1/1‑100 (MQ=255)

                                                                      CAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCg                              <  2:3717643‑M1/100‑1 (MQ=255)

                                                                       AATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGt                             <  2:354855‑M1/100‑1 (MQ=255)

                                                                       AATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGt                             <  2:3154649‑M1/100‑1 (MQ=255)

                                                                        atcaaACTGATATTTGGTTGACCAGTTTTCGTTTTTTTTCTCATCTTTACGTGCCAACTTCCAGTTCTAATGGTCTTGTTTGAGATTAACgtggg                                 >  1:1446438/1‑95 (MQ=255)

                                                                        ATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTa                            <  2:2350521‑M1/100‑1 (MQ=255)

                                                                         tcaaACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTaa                           >  1:751202/1‑100 (MQ=255)

                                                                          caaACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTaaa                          >  1:1160904/1‑100 (MQ=255)

                                                                            aaCTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAAt                        >  1:577518/1‑100 (MQ=255)

                                                                             aCTGATATTTGGTTGACCAGTTTTCGTTTTTTTTTTTATTTTTACATGCGAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCTGTAAAAtt                       >  1:2124667/1‑100 (MQ=255)

                                                                             aCTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAAtt                       <  2:2668385/100‑1 (MQ=255)

                                                                              cTGATATTTGGTTGACCAGTTTTCGTTTTTTTTCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTg                      >  1:699003/1‑100 (MQ=255)

                                                                              cTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTg                      >  2:526298/1‑100 (MQ=255)

                                                                                 atatTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGccc                   <  1:732216/100‑1 (MQ=255)

                                                                                  tatTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCg                  >  2:1675125/1‑100 (MQ=255)

                                                                                  tatTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCg                  <  2:1650853/100‑1 (MQ=255)

                                                                                  tatTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTCTACGTGCCAACTTCCAGTGCTAATGGGATAGTTTGAGATTAACGGGGGCCGTAAAATTGccc                   >  2:1333014/1‑99 (MQ=255)

                                                                                   atTTGGTTGCCCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGt                 <  1:2208032/100‑1 (MQ=255)

                                                                                   atTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGt                 >  2:182006/1‑100 (MQ=255)

                                                                                      tGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGt              <  1:3285527/100‑1 (MQ=255)

                                                                                      tGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGt              <  1:2991098/100‑1 (MQ=255)

                                                                                      tGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGt              >  2:815798/1‑100 (MQ=255)

                                                                                      ccgatctccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGt              <  2:1277572‑M2/88‑1 (MQ=255)

                                                                                       ggTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTa             <  1:3198432/100‑1 (MQ=255)

                                                                                       agTTGACCAGTTTTCGTTTTTTTGCTCACCAGTACGTGACAACTTCCAGTGCAAATGATAGAGTTTGCGATTAACAGGGGCCGTAAAATTGCCCg                  >  1:2706235/2‑95 (MQ=255)

                                                                                        gTTGACCAGTTTTCGTTTTTTTTTTTTTTTTTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTTTAg            >  1:285555/1‑100 (MQ=255)

                                                                                        gTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAg            <  2:2303493/100‑1 (MQ=255)

                                                                                         ttgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAgg           <  2:3662572‑M2/91‑1 (MQ=255)

                                                                                          tgaccagtTTTCGTTTTTTTGCCCACCTGTCCGAGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCGCGTTGTAGGc          >  1:2535537‑M2/9‑100 (MQ=255)

                                                                                          tgaccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGc          <  1:2116033‑M2/92‑1 (MQ=255)

                                                                                            accagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCg        <  1:606362‑M2/94‑1 (MQ=255)

                                                                                            accagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCg        <  1:3534963‑M2/94‑1 (MQ=255)

                                                                                             ccagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCgg       <  2:3528210‑M2/95‑1 (MQ=255)

                                                                                             ccAGTTTTCGTTTTTTTTTTTTTTTTTACGTGCCAACTTCCAGTGCTAATTTTATAGTTTGAGATTAACTGGGGCCGTAAAATTGCCCGTTGTAgatcgg       >  1:1277561/1‑95 (MQ=255)

                                                                                              cagtTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGa      <  1:1906239‑M2/96‑1 (MQ=255)

                                                                                                  tttCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAg  <  2:2036142/100‑1 (MQ=255)

TGTGCGAACGCGGTGCGCGCGAGTGTGTGGCTGCGCTGTAACTAACTGATTACCCTACAGACTTACTGGTCAATCAAACTGATATTTGGTTGACCAGTTTTCGTTTTTTTGCCCACCTGTACGTGCCAACTTCCAGTGCTAATGGTATAGTTTGAGATTAACGGGGGCCGTAAAATTGCCCGTTGTAGGCCGGATAAG  >  NC_000913/4554321‑4554518

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.