BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 4638146	130 (0.940)	10 (0.080)	7/156	NT	7.2%	intergenic (+26/‑32)	creC/creD	sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein
*	?	NC_000913	= 4638170	144 (1.190)	10 (0.080)	7/156	NT	7.2%	intergenic (+50/‑8)	creC/creD	sensory histidine kinase in two‑component regulatory system with CreB or PhoB/inner membrane protein
Rejected: Frequency below cutoff threshold.

Only 100 of 180 total aligned reads displayed.

GGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAT  >  NC_000913/4638072‑4638269

ggAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAg                                                                                                    <  2:1746579‑M2/100‑2 (MQ=255)

   aGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaag                                                                                                 >  2:2770391‑M2/1‑96 (MQ=255)

     gTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagac                                                                                               <  1:2997711‑M2/100‑7 (MQ=255)

       ggCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagacta                                                                                             <  2:2364643‑M2/100‑9 (MQ=255)

        gCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactat                                                                                            <  2:1032128‑M2/100‑10 (MQ=255)

         cGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatg                                                                                           >  2:1081442‑M2/1‑90 (MQ=255)

          gTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgt                                                                                          >  1:1076957‑M2/1‑89 (MQ=255)

           tGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTTCCAAATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGtt                                                                                         <  1:565956/100‑1 (MQ=255)

           tGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGtt                                                                                         >  2:2010689/1‑100 (MQ=255)

             cTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGa                                                                                       <  1:1963376/100‑1 (MQ=255)

             cTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGa                                                                                       >  1:2578478/1‑100 (MQ=255)

             cTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGa                                                                                       <  2:480209/100‑1 (MQ=255)

               ggCCTCGCTTCGACTACACCGTCACTTCACTTAGCTTCAAATGCTTCCCACATATGCTTCGTATCCTGCTGCCATGGCAAAGGAGAAGACAATGTTg                                                                                        <  1:1920526/97‑1 (MQ=255)

                gCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAt                                                                                    <  1:608495/100‑1 (MQ=255)

                gCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAt                                                                                    >  1:122982/1‑100 (MQ=255)

                  cTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATcc                                                                                  >  1:2728593/1‑100 (MQ=255)

                   tCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATccc                                                                                 <  2:3750945/100‑1 (MQ=255)

                    cGCTTCGACTTCACCGTCACTTCACATCGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATcccc                                                                                <  2:599006/100‑1 (MQ=255)

                    cGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATcccc                                                                                <  2:447417/100‑1 (MQ=255)

                     gCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATccccc                                                                               >  2:649406/1‑100 (MQ=255)

                     gCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATccccc                                                                               >  2:3245346/1‑100 (MQ=255)

                        tCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTg                                                                            >  2:2115220/1‑100 (MQ=255)

                          gACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTg                                                                            >  2:162317/1‑98 (MQ=255)

                           aCTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTc                                                                         >  2:3724277/1‑100 (MQ=255)

                           aCTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTc                                                                         <  2:1165214/100‑1 (MQ=255)

                            cTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCt                                                                        >  2:3674455/1‑100 (MQ=255)

                             ttCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTg                                                                       <  2:2182868/100‑1 (MQ=255)

                               cACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGa                                                                     >  1:2323932/1‑100 (MQ=255)

                               cACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAAT‑CCCCCTGTTCTGGaa                                                                    <  1:613710/100‑1 (MQ=255)

                                 ccGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGaaa                                                                   >  1:3446067/1‑100 (MQ=255)

                                   gTCACTTCACATAGCTTCTAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAAt                                                                 <  1:3617816/100‑1 (MQ=255)

                                      ctttCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGAc                                                              <  1:344863/98‑1 (MQ=255)

                                      aCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGAc                                                              <  1:1103885/100‑1 (MQ=255)

                                      aCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGAc                                                              <  1:1862935/100‑1 (MQ=255)

                                      aCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGAc                                                              >  1:2885942/1‑100 (MQ=255)

                                      aCTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGAc                                                              >  2:404886/1‑100 (MQ=255)

                                       cTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACt                                                             >  2:319847/1‑100 (MQ=255)

                                        ttCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGAcag                                                            >  2:344868/1‑98 (MQ=255)

                                        ttCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTa                                                            <  2:885769/100‑1 (MQ=255)

                                         tCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAg                                                           <  2:2081779/100‑1 (MQ=255)

                                          cacaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGc                                                          <  2:3437614/100‑1 (MQ=255)

                                           acaTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGcc                                                         >  2:3094187/1‑100 (MQ=255)

                                            caTAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCt                                                        >  1:3822671/1‑100 (MQ=255)

                                              tAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGt                                                      >  2:1652387/1‑100 (MQ=255)

                                                 cTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcg                                                   <  1:954753‑M2/100‑51 (MQ=255)

                                                 cTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTg                                                   >  2:700586/1‑100 (MQ=255)

                                                  ttCAAATTTTTCCCACATAGTCTTCGTATTCTGCTGCCATTGCCAAGGAGAAGTCTAGGTTGGTCTCCCCCCTGTTCTGGAAAATGACTCGCCTGgttcg                                                  <  1:3391009/100‑3 (MQ=255)

                                                  ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTgg                                                  >  1:3027533/1‑100 (MQ=255)

                                                  ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTgg                                                  <  1:1686217/100‑1 (MQ=255)

                                                  ttCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAACGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTATCCTGATTgg                                                  >  1:1148259/1‑100 (MQ=255)

                                                    cAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTg                                                >  1:1053468/1‑100 (MQ=255)

                                                     aaaTTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGc                                               <  1:348073/100‑1 (MQ=255)

                                                       aTTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAg                                             <  2:1122239/100‑1 (MQ=255)

                                                        ttcttcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGt                                            <  2:565518/100‑1 (MQ=255)

                                                          cttcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTAt                                          <  2:3584536/100‑1 (MQ=255)

                                                            tcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggcca                                        <  2:1393130‑M2/100‑62 (MQ=255)

                                                            tcCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTg                                        <  2:1374788/100‑1 (MQ=255)

                                                             cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTTAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATGGc                                       >  2:1218833/1‑100 (MQ=255)

                                                             cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGc                                       <  2:1133781/100‑1 (MQ=255)

                                                             cccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGc                                       >  2:341797/1‑100 (MQ=255)

                                                              ccACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggccagc                                      <  1:1449909‑M2/100‑64 (MQ=255)

                                                                 caTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggccagcacg                                   <  1:2013585‑M2/100‑67 (MQ=255)

                                                                 caTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgtt                                   <  2:2586417/100‑1 (MQ=255)

                                                                 caTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgtt                                   <  1:866218/100‑1 (MQ=255)

                                                                  aTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgttg                                  <  1:2364626/100‑1 (MQ=255)

                                                                  aTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgttg                                  <  1:592740/100‑1 (MQ=255)

                                                                  aTAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgttg                                  <  1:3226027/100‑1 (MQ=255)

                                                                   tAGTCTTCGTATCCTGCTGCCATTGCAAAGGAgaagactatgtgggaagaatttgaagctatgtgaagtgacggtgaagtcgaagcgaggccagcac                                    <  1:50887‑M2/97‑66 (MQ=255)

                                                                   gatctttCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCtgttgt                                 <  1:1269024/95‑1 (MQ=255)

                                                                    aGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTgttgtt                                <  1:2480895/100‑1 (MQ=255)

                                                                     gTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGttgttg                               <  2:2163263/100‑1 (MQ=255)

                                                                        ttCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTAGAtc                            >  2:1269035/1‑99 (MQ=255)

                                                                            tATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGa                        <  2:2484933/100‑1 (MQ=255)

                                                                              tCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATa                      >  2:1517817/1‑100 (MQ=255)

                                                                               ccTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTCGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATaa                     >  1:1272859/1‑100 (MQ=255)

                                                                                ctgctgCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAAt                    <  2:2443808/100‑1 (MQ=255)

                                                                                ctgctgCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAAt                    >  1:3555681/1‑100 (MQ=255)

                                                                                ctgctgCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAAt                    >  2:2910555/1‑100 (MQ=255)

                                                                                 tgctgcCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATg                   >  1:991463/1‑100 (MQ=255)

                                                                                 tgctgcCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATg                   >  1:2231738/1‑100 (MQ=255)

                                                                                 tgctgcCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATg                   >  2:814377/1‑100 (MQ=255)

                                                                                   ctgcCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCt                 >  1:799162/1‑100 (MQ=255)

                                                                                   ctgcCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCt                 >  1:1949932/1‑100 (MQ=255)

                                                                                    tgcCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTGCTGGAAAATGACTAGCCTGCTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTg                >  1:2097871/1‑100 (MQ=255)

                                                                                      ccATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGAt              >  1:2040734/1‑100 (MQ=255)

                                                                                      ccATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGAt              >  1:686335/1‑100 (MQ=255)

                                                                                      ccATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGAt              >  1:3594327/1‑100 (MQ=255)

                                                                                       cATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGATGCAGTATTGCTGTTGTTGATTCCGATAATGCTGAtt             <  1:2060906/100‑1 (MQ=255)

                                                                                        aTTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTc            <  2:2885964/100‑1 (MQ=255)

                                                                                        aTTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTc            >  1:954472/1‑100 (MQ=255)

                                                                                         ttGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCg           <  2:661459/100‑1 (MQ=255)

                                                                                           gCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         <  2:3461471/100‑1 (MQ=255)

                                                                                           gCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  2:166869/1‑100 (MQ=255)

                                                                                           gCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  1:2275857/1‑100 (MQ=255)

                                                                                           gCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGc         >  2:2492620/1‑100 (MQ=255)

                                                                                            cAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCa        >  2:2328267/1‑100 (MQ=255)

                                                                                              aaGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAgg      <  1:3354085/100‑1 (MQ=255)

                                                                                                ggAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTg    >  2:4380/1‑100 (MQ=255)

                                                                                                  agaagaCTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAt  >  2:379843/1‑100 (MQ=255)

                                                                                                  agaagaCTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAt  >  2:2194221/1‑100 (MQ=255)

GGAAGGTGGCGTGCTGGCCTCGCTTCGACTTCACCGTCACTTCACATAGCTTCAAATTCTTCCCACATAGTCTTCGTATCCTGCTGCCATTGCAAAGGAGAAGACTATGTTGAAATCCCCCCTGTTCTGGAAAATGACTAGCCTGTTTGGTGCAGTATTGCTGTTGTTGATTCCGATAATGCTGATTCGGCAGGTGAT  >  NC_000913/4638072‑4638269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.