Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 3423823–3424234 3424608–3424238 5–786 97 [0] [82] 84 [rrlD] [rrlD]

CACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTA  >  NC_000913/3424554‑3424708
                                                       |                                                                                                     
cacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                           >  2:190260/1‑100 (MQ=31)
cacTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTa                                                           <  2:2593640/100‑1 (MQ=31)
 acTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGATATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTaa                                                         <  1:2817192/100‑1 (MQ=17)
  cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                                        >  1:3029660/1‑100 (MQ=33)
  cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                                        >  2:1597345/1‑100 (MQ=33)
  cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                                        <  2:1694134/100‑1 (MQ=32)
  cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                                        >  2:1597330/1‑100 (MQ=33)
  cTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAg                                                        <  1:836409/100‑1 (MQ=32)
    gTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGcc                                                      >  2:123679/1‑100 (MQ=33)
      ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTc                                                    >  1:2955426/1‑100 (MQ=33)
      ccGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTACATGCAGACTGGCGTCCACAATTCTAAGCCTc                                                    >  1:1770019/1‑100 (MQ=12)
       cGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTcc                                                   >  1:2901543/1‑100 (MQ=32)
        gCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTccc                                                  <  1:208371/100‑1 (MQ=33)
         cAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCa                                                 <  2:772035/100‑1 (MQ=33)
          aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                                >  2:3110738/1‑100 (MQ=33)
          aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                                <  1:3341281/100‑1 (MQ=33)
          aaCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAc                                                <  2:1184614/100‑1 (MQ=33)
           aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                               <  1:1504000/100‑1 (MQ=33)
           aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                               <  2:2098684/100‑1 (MQ=33)
           aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                               <  2:1675774/100‑1 (MQ=33)
           aCCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCAcc                                               <  2:1601292/100‑1 (MQ=33)
            cccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCt                                              >  2:978632/1‑100 (MQ=33)
             ccGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCTCACCTa                                             >  1:3271352/1‑100 (MQ=17)
              cGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTAt                                           <  2:3035344/100‑1 (MQ=33)
                gATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCTTGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                         <  1:830407/100‑1 (MQ=17)
                gATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                         >  1:234402/1‑100 (MQ=33)
                gATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                         <  2:467681/100‑1 (MQ=33)
                gATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATcc                                         <  2:467868/100‑1 (MQ=33)
                  ttACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTa                                       <  2:2976062/100‑1 (MQ=33)
                   tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac                                      <  2:1187431/100‑1 (MQ=33)
                   tACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTac                                      <  1:3377277/100‑1 (MQ=33)
                    aCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                                     <  2:246035/100‑1 (MQ=33)
                    aCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                                     <  1:893549/100‑1 (MQ=32)
                    aCGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                                     <  2:3650826/100‑1 (MQ=33)
                     cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTacac                                    <  2:2455084/100‑1 (MQ=33)
                     cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTacac                                    >  2:2503586/1‑100 (MQ=33)
                     cGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTacac                                    <  1:3420050/100‑1 (MQ=32)
                      gggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTAcaca                                   <  2:1947374/100‑1 (MQ=33)
                       ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTAcaca                                   >  1:3603379/1‑99 (MQ=33)
                       ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                                  >  1:3276620/1‑100 (MQ=32)
                       ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                                  >  1:2869029/1‑100 (MQ=33)
                       ggTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACAt                                  >  1:3276471/1‑100 (MQ=33)
                        gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTaca                                     <  1:366530/96‑1 (MQ=33)
                        gTCAACGTTAGAACATCAAACATTAAAGGGTGGTATCTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATc                                 >  2:381529/1‑100 (MQ=18)
                          cAACGTTAGAACATCAAACATTAAAGTGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCaa                               <  1:1217775/100‑1 (MQ=12)
                            aCGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgg                             <  2:2257963/100‑1 (MQ=33)
                             cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAgcc                            >  1:903264/1‑98 (MQ=17)
                             cGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGc                            >  1:1106751/1‑100 (MQ=32)
                              gTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCt                           <  1:2815922/100‑1 (MQ=33)
                                tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGTCGTTCTCACGACTAAGCCTCCACCCAATTCTACACATCAAGGCTCa                         <  1:2993949/100‑1 (MQ=11)
                                tAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCa                         <  1:3377937/100‑1 (MQ=33)
                                 aGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTTCTTCTACATGACTCAGCCACCCCCCAGATCTACACATCAAGGCTCaa                        <  1:3447705/100‑1 (MQ=2)
                                  gAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAAt                       <  2:2681749/100‑1 (MQ=33)
                                    aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt                     >  1:780075/1‑100 (MQ=33)
                                    aCATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGt                     <  2:1499570/100‑1 (MQ=33)
                                     cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt                    >  1:2691143/1‑100 (MQ=33)
                                     cATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGtt                    <  2:753470/100‑1 (MQ=32)
                                     cATCAAACATTAAAGGGTAGTATTTCAAGGTCGGCTCCATGCAGACTTTCGTCCAAATGATACGGCCACCACCCAGATCTACACATCAAGGCTCAATGtt                    <  1:2445492/100‑1 (MQ=2)
                                      aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc                   <  2:2361144/100‑1 (MQ=33)
                                      aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc                   >  1:2682670/1‑100 (MQ=33)
                                      aTCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTc                   <  2:1837219/100‑1 (MQ=33)
                                       tCAAACATTATAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTTGCGTTCACACTACTAAGCCACCCCCGAGTTCTACACATCAAGGCTCAATGTTCa                  <  1:1995705/100‑1 (MQ=11)
                                       tCAAACATTAAAGGGTTGTATTTCAACGTCGGCTCCATGCAGATTTTTTTTTTAATTATACGGCCTCCCCCGTAATCTACACATCAAGGCTCAATGTTCa                  <  1:3793482/100‑1 (MQ=0)
                                       tCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa                  <  1:123676/100‑1 (MQ=33)
                                        cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCa                  <  2:3603405/99‑1 (MQ=33)
                                        cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                 >  2:761288/1‑100 (MQ=33)
                                        cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                 >  1:1841349/1‑100 (MQ=33)
                                        cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                 <  2:71863/100‑1 (MQ=33)
                                        cAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                 <  2:699458/100‑1 (MQ=33)
                                        cAAACATTAAAGGGTGGTATATCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAg                 >  1:2355734/1‑100 (MQ=17)
                                         aaaCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgt                >  2:2817513/1‑100 (MQ=33)
                                           aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt              >  2:3335713/1‑100 (MQ=33)
                                           aCATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAgtgt              <  2:3740515/100‑1 (MQ=32)
                                               tAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGATTTTTTTTCTAATGATACGGCGACCACCGAGATCTACACATCAAGGCTCAATGTTCAGTGTCAAg          <  1:2462187/100‑1 (MQ=2)
                                                aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTACGCCTCCCACCTATACTACACATCAAGGCTCAATGTTCAGTGTCAAGc         >  1:356415/1‑100 (MQ=12)
                                                aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc         >  1:1021744/1‑100 (MQ=32)
                                                aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc         >  2:1236722/1‑100 (MQ=33)
                                                aaaGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGc         >  2:3185898/1‑100 (MQ=33)
                                                    ggtggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata     >  2:3227829/1‑100 (MQ=33)
                                                    ggtggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCtata     <  1:356351/100‑1 (MQ=33)
                                                     gtgttATTTCAAGGTCGGCTCCATGCAGATTTTCTTCCAAATTTTACGGCGACCCCCGAGATCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAg    <  1:1251073/100‑1 (MQ=0)
                                                      tggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGt   <  2:3108049/100‑1 (MQ=33)
                                                       ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTa  >  2:2113772/1‑100 (MQ=33)
                                                       ggtATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTa  >  2:943326/1‑100 (MQ=33)
                                                       |                                                                                                     
CACTGTCCGCAACCCGGATTACGGGTCAACGTTAGAACATCAAACATTAAAGGGTGGTATTTCAAGGTCGGCTCCATGCAGACTGGCGTCCACACTTCTAAGCCTCCCACCTATCCTACACATCAAGGCTCAATGTTCAGTGTCAAGCTATAGTA  >  NC_000913/3424554‑3424708

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: