| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,060,261 | G→T | 15.3% | intergenic (+31/‑186) | typA → / → yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,060,261 | 0 | G | T | 15.3% | 443.1 / 60.9 | 164 | intergenic (+31/‑186) | typA/yihL | GTP‑binding protein/putative DNA‑binding transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (65/73); new base T (10/15); total (75/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.63e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 | |||||||||||
Only 100 of 166 total aligned reads displayed.
CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATT > NC_000913/4060162‑4060359 | ngTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAg > 2:3451465/2‑100 (MQ=255) tATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCg > 2:2219601/1‑100 (MQ=255) ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt < 1:3034214/100‑1 (MQ=255) ttCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGAt < 1:1476774/100‑1 (MQ=255) cGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATgg > 2:3685237/1‑100 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc < 2:345087/100‑1 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc > 2:2574562/1‑100 (MQ=255) gTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGc < 1:1438462/100‑1 (MQ=255) tAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCa > 2:2119378/1‑100 (MQ=255) aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAg < 2:2624899/100‑1 (MQ=255) aaaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAg < 1:254784/100‑1 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 2:2175228/100‑1 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 2:2174652/100‑1 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 2:2151735/100‑1 (MQ=255) aaCGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAgg < 2:1799082/100‑1 (MQ=255) cGTCACCTGACGGAAAACGATAGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTAATAAAAAACCTGCCAGCGATGGCAGC‑tt > 2:163058/1‑100 (MQ=255) gTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttt < 2:2124445/100‑1 (MQ=255) gTCACCTGACGGAAAACGATCGTCACCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttt < 2:2974000/100‑1 (MQ=39) cACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttt > 1:3581742/1‑100 (MQ=255) aCCTGACGGAAAACGATCGTAGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttt‑t < 1:261316/100‑1 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttt‑tt > 1:3350381/1‑100 (MQ=255) ccTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGACAGG‑ttttt‑tt > 1:617158/1‑100 (MQ=255) tGACGGAAAACGATCGTCTCCTCTCTAATCGCGCACCGACAGACGATTAATTTTGTTTTTTAGTCATAAAAAACCTGACATCGCTGGCAGG‑ttttt‑ta < 1:451365/98‑2 (MQ=25) gACGGAAACCGATCGTCGCCGCGCCAAACGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttgtatga < 1:1382773/100‑7 (MQ=37) gACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCATCGCTGGCAGG‑ttttt‑tatga < 1:54057/100‑5 (MQ=255) aCGGAAAACGATTGTCGTCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGc < 1:228179/100‑1 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGc < 1:3550267/100‑1 (MQ=255) aCGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGc < 2:2593623/100‑1 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGcc > 2:3623557/1‑100 (MQ=255) cGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGcc > 2:531858/1‑100 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGGAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttt‑ttttttgc < 2:3245478/100‑5 (MQ=255) ggAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAATACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCt < 2:3267011/100‑1 (MQ=255) gAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTg > 2:1536767/1‑100 (MQ=255) aaaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGt > 2:3566473/1‑100 (MQ=255) aaaCGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑ttttt‑ttttttct > 1:3488194/1‑93 (MQ=255) aaCGATCTTCGCCGCGCCAACCGCGAACCGAAAGACTATTAATTTCGTTTTTTAGTCTTAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCg < 1:1704605/100‑1 (MQ=255) cGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTCATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTg > 1:2369780/1‑100 (MQ=255) cGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTg > 2:1803142/1‑100 (MQ=255) atcggggccggGCCAACCGCGCATCGAAAGACGAGTAGTTGCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAg < 1:767756/94‑1 (MQ=255) aTCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAg < 2:1785400/100‑1 (MQ=255) tcgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAgc < 2:1081981/100‑1 (MQ=255) cgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTg > 1:1147203/1‑96 (MQ=255) cgtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAgcg < 1:2088142/100‑1 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAgcgc < 2:2737151/100‑1 (MQ=255) gtcgCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAgcgc > 2:2801421/1‑100 (MQ=255) cgccgcGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGcac > 2:1724925/1‑100 (MQ=255) cgacacctaCCGCGCAACGGAAGACGATTGATTTCGTTTTTTAGTCAGAAAAAACCTGCCACCTATGGCACG‑TTTTT‑TTTTGCCTGTCCTGAGCCcac < 1:2181876/90‑1 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACAcc < 2:3371123/100‑1 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACAcc < 2:288938/100‑1 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACAcc < 2:1239733/100‑1 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACAcc < 1:999053/100‑1 (MQ=255) cgcgCCAACCGCGCACCGAAAGACGATCAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACAcc < 2:579002/100‑1 (MQ=255) cgcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCaa > 2:3149002/1‑100 (MQ=255) cgcCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCaa > 2:1990884/1‑100 (MQ=255) ccACCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACCCCAATg < 2:2373278/100‑1 (MQ=255) aaCCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCg < 1:185647/100‑1 (MQ=255) ccGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAg > 2:430282/1‑100 (MQ=255) cgcgCACCGAAAGACGATTAATTTCGTTTTTTAGTCATCAATAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAg < 1:2708589/99‑1 (MQ=255) ccgatctgAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTa < 1:240854/93‑1 (MQ=255) ccGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc < 2:2126231/100‑1 (MQ=255) caaaaGACGAACAACTTCCTTTTTTAGTCATAAAATACCTTCCATCGATTACCGT‑ATTGT‑TTTTCCCTGTCGTCATCGCACACCAATTCTATTAtctc < 1:2979546/96‑1 (MQ=255) cGAAAGACGATTAATTTCGTTTTTTTGTCATAAAAAACCTGCCAGCGATGGGAGG‑TGTTT‑GTTTGCCTGTCGTGTGCGCAGACCAATGCGAGTAtc < 1:769252/96‑1 (MQ=255) cGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTccc > 2:309193/1‑100 (MQ=255) cGAAAAACGATTAATTTCTTTTTTTATTCATAAAAAAACTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTcc < 1:2277544/99‑1 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTTTCTTTTGTTATCGCAAAACAATTCGAGTATCTCCCt > 1:662451/1‑100 (MQ=255) gAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCt > 2:3124672/1‑100 (MQ=255) aGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtat < 1:2134280/100‑1 (MQ=255) gACGATTAATTTCGTTTTTTAGTCATAAAAGCCCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata < 1:1385640/100‑1 (MQ=255) gACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGGCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCCCCCTtata < 1:1566917/100‑1 (MQ=255) gACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata < 2:2369797/100‑1 (MQ=255) gACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTtata < 1:42610/100‑1 (MQ=255) aaTTTCGTTTTTTAGTCTTAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTTTCTGTCGTAAGCGCAAACCAATGCGTGCATCTCTCTTATAAGt > 1:2516816/1‑96 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc < 1:2766136/100‑1 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc > 2:1408804/1‑100 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTAc > 1:412315/1‑100 (MQ=255) gTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑‑TTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACg < 2:510613/100‑1 (MQ=255) ttttttAGTAATAAAAACCTTGCCAGCAATGGAAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTa < 2:662458/98‑1 (MQ=255) tttttAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGt > 2:415526/1‑100 (MQ=255) ttttAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTc < 1:824863/100‑1 (MQ=255) tAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt < 2:110944/100‑1 (MQ=255) tAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt > 1:1008611/1‑100 (MQ=255) tAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGAGAGTATCTCCCTTATAAGTCTGTGGTTAAGTCAAt > 1:2327964/1‑100 (MQ=255) ggcaaaaaaaaaCCTGCCGTCGCTGGCAGGTTTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGTGTATCTCCCTTATACGTCTCTGATTACGTCAAt > 1:1056549/7‑100 (MQ=21) aGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTTCTTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAAt < 2:1165851/100‑1 (MQ=255) gTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATag < 2:351575/100‑1 (MQ=255) tCATAAAAAACCTGCCAGGCATGGCAGG‑GTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga < 1:2642415/100‑1 (MQ=255) aaaaaaaaCCTGCCATCGCTGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagaga > 2:1864917/3‑100 (MQ=255) aTAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCAAACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTCCGTCAATcgag > 1:2257983/1‑99 (MQ=255) tAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTTTTTTTTTTTAGCGCACACCAATGCGAGTATTTCCCTTTTTAGTCTGTGGTTTCGTCAATag > 1:242052/1‑96 (MQ=255) tAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCATGTCGTGAGAGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATaga > 1:1369381/1‑97 (MQ=255) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag > 2:3542139/2‑100 (MQ=255) aaaaaaaCCTGCCATCGCTGGCAGG‑TTTTT‑TTTTGCCTGTAGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATagagag > 2:856738/2‑100 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt > 2:3841479/1‑100 (MQ=255) aaaaCCTGCCATCGCTGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt > 2:1988515/1‑100 (MQ=255) aaaaCCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCtt < 1:1292716/100‑1 (MQ=255) ccTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc < 2:1020088/100‑1 (MQ=255) ccTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTc < 2:897351/100‑1 (MQ=255) cTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTca < 2:74673/100‑1 (MQ=255) gCCAGCGATGGCAGG‑TTTTT‑TTTTTTTTTTTTTTTGCGCACACCAATGCGAATATCTCCCTTATAAGTGTGTGGTTAGGTCAATAGAGAGTTTTGTca > 1:1780892/1‑98 (MQ=255) aGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAAtt > 2:878557/1‑100 (MQ=255) | CGTATTCGTAAACGTCACCTGACGGAAAACGATCGTCGCCGCGCCAACCGCGCACCGAAAGACGATTAATTTCGTTTTTTAGTCATAAAAAACCTGCCAGCGATGGCAGG‑TTTTT‑TTTTGCCTGTCGTGAGCGCACACCAATGCGAGTATCTCCCTTATAAGTCTGTGGTTACGTCAATAGAGAGCTTTGTCACAATT > NC_000913/4060162‑4060359 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |