BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4201782 =	112 (0.930)	22 (0.220)	15/164	10.7	18.9%	intergenic (‑94/‑144)	zraP/zraS	Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR
*	?	NC_000913	4201828 =	96 (0.960)	22 (0.220)	15/164	10.7	18.9%	intergenic (‑140/‑98)	zraP/zraS	Zn‑dependent periplasmic chaperone/sensory histidine kinase in two‑component regulatory system with ZraR
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below cutoff threshold.

Only 100 of 114 total aligned reads displayed.

TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATG  >  NC_000913/4201683‑4201880

tttCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACg                                                                                                    <  2:1095154/100‑1 (MQ=255)

  tCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAg                                                                                                  <  2:2087774/100‑1 (MQ=255)

   cATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGt                                                                                                 >  2:1574769/1‑100 (MQ=255)

    aTGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTa                                                                                                >  2:1171898/1‑100 (MQ=255)

      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                              >  2:1475452/1‑100 (MQ=255)

      ggTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTaaa                                                                                              >  2:495947/1‑100 (MQ=255)

         tAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAAt                                                                                           >  1:260348/1‑100 (MQ=255)

         tAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAAt                                                                                           <  1:176287/100‑1 (MQ=255)

          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATg                                                                                          <  2:2397060/100‑1 (MQ=255)

          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATg                                                                                          <  1:615754/100‑1 (MQ=255)

          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATg                                                                                          <  1:1914582/100‑1 (MQ=255)

          aaTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATg                                                                                          <  2:2397643/100‑1 (MQ=255)

           aTCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGa                                                                                         >  1:2328161/1‑100 (MQ=255)

           aTCCTCAAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGa                                                                                         >  1:1318021/1‑100 (MQ=255)

            tcctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATGAACGAGTAAAAATGAc                                                                                        >  1:1750588/1‑100 (MQ=255)

            tcctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGAc                                                                                        <  2:959759/100‑1 (MQ=255)

            tcctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGAc                                                                                        <  2:2432047/100‑1 (MQ=255)

              ctccAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTc                                                                                      >  2:1522794/1‑100 (MQ=255)

                 cAGTGGTTGTCTTACTTGGGGTATTGCATCTTCCGTGGCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGcc                                                                                   <  1:2752352/100‑1 (MQ=255)

                 cAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGcc                                                                                   <  2:1669659/100‑1 (MQ=255)

                   gTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctg                                                                                 >  2:1712582/1‑100 (MQ=255)

                      gTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCctgctg                                                                              <  1:209955/100‑1 (MQ=255)

                       ttGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCtgctgc                                                                             <  1:2364158/100‑1 (MQ=255)

                       ntGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCtgctgc                                                                             >  1:1444288/2‑100 (MQ=255)

                         gTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                           >  1:571252/1‑100 (MQ=255)

                         gTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCgg                                                                           >  1:1060723/1‑100 (MQ=255)

                          tCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCggg                                                                          <  1:618806/100‑1 (MQ=255)

                          tCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCggg                                                                          >  2:2956898/1‑100 (MQ=255)

                           cTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGt                                                                         <  1:1884534/100‑1 (MQ=255)

                           cTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGt                                                                         >  2:268421/1‑100 (MQ=255)

                              aCTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGc                                                                      >  1:2869821/1‑100 (MQ=255)

                               cTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCg                                                                     >  1:492745/1‑100 (MQ=255)

                                ttCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCgn                                                                    <  2:1468086/100‑2 (MQ=255)

                                ttCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGa                                                                    >  2:7489/1‑100 (MQ=255)

                                ttCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGa                                                                    >  2:1454561/1‑100 (MQ=255)

                                 tCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAg                                                                   >  2:2142076/1‑100 (MQ=255)

                                       aTTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttt                                                             >  2:2045120/1‑100 (MQ=255)

                                        ttGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAtttt                                                            <  2:2920089/100‑1 (MQ=255)

                                        ttGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAtttt                                                            <  1:969177/100‑1 (MQ=255)

                                        ttGCATCTGCCGTGCCAACGATGAAACGCTGATATGAGGGGTACTCTGGCATGATAAACGAGTAAGAATGACTCGCCTGCTGCGGGTAGCGAGTCAtttt                                                            <  1:1432256/100‑1 (MQ=255)

                                         tGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCAttttt                                                           <  2:711606/100‑1 (MQ=255)

                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                          <  1:2799824/100‑1 (MQ=255)

                                          gCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTa                                                          >  2:2507575/1‑100 (MQ=255)

                                            aTCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATATACGAGTAATAATGACTCGCTACCCGCAGCAGGCGAGTCATTTTTACt                                                        <  1:346787/100‑1 (MQ=18)

                                             tCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTc                                                       <  2:592506/100‑1 (MQ=255)

                                              cTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCa                                                      <  2:2185229/100‑1 (MQ=255)

                                                tCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCAtt                                                    >  2:2601796/1‑100 (MQ=255)

                                                 ccGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTg                                                   <  1:1112447/100‑1 (MQ=255)

                                                  cGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGa                                                  <  2:1374041/100‑1 (MQ=255)

                                                    tGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGaaa                                                >  1:1751451/1‑100 (MQ=255)

                                                    tGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGaa                                                 >  2:885666/1‑99 (MQ=255)

                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAAc                                               <  2:2666273/100‑1 (MQ=255)

                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAAc                                               <  1:2910878/100‑1 (MQ=255)

                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAAc                                               >  1:2388351/1‑100 (MQ=255)

                                                     gCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAAc                                               <  2:122189/100‑1 (MQ=255)

                                                      ccAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACt                                              >  2:45189/1‑100 (MQ=255)

                                                      ccAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACt                                              >  2:193573/1‑100 (MQ=255)

                                                       cAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACtt                                             >  2:1281272/1‑100 (MQ=255)

                                                       cAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACtt                                             >  2:2733949/1‑100 (MQ=255)

                                                       cAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACtt                                             >  2:1799836/1‑100 (MQ=255)

                                                        aaCGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTa                                            >  2:2242439/1‑100 (MQ=255)

                                                        aaCGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTa                                            <  2:1933328/100‑1 (MQ=255)

                                                         aCGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTa                                            >  1:736824/1‑99 (MQ=255)

                                                          cGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAg                                          >  2:2403983/1‑100 (MQ=255)

                                                            aTGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGcc                                        <  2:2705897/100‑1 (MQ=255)

                                                            aTGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGcc                                        <  2:623260/100‑1 (MQ=255)

                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                    <  1:423405/100‑1 (MQ=255)

                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtg                                    <  1:1712574/100‑1 (MQ=255)

                                                                aaCGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGCCATTTTTACTCATTGAAACTTAAGCCTTtg                                    <  2:1864983/100‑1 (MQ=255)

                                                                  cGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtgtg                                  >  2:1633747/1‑100 (MQ=255)

                                                                  cGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtgtg                                  <  1:1398601/100‑1 (MQ=255)

                                                                  cGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTtgtg                                  >  2:1124287/1‑100 (MQ=255)

                                                                   gCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTgtgt                                 <  1:942577/100‑1 (MQ=255)

                                                                        tatGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAg                            <  1:279598/100‑1 (MQ=255)

                                                                          tGACGGGTAATCTGGCATGATAAACGAGTAAGAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAgcg                          >  1:1654122/1‑100 (MQ=255)

                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGTGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                       <  1:2606483/100‑1 (MQ=255)

                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                       <  1:1171892/100‑1 (MQ=255)

                                                                             cGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAg                       <  1:933449/100‑1 (MQ=255)

                                                                               ggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                     <  1:2383725/100‑1 (MQ=255)

                                                                               ggTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAggg                     >  1:1358622/1‑100 (MQ=255)

                                                                                gTAATGTGGCTTGATAAACGAGTAAAAATGATTCTCCTGCTGCGGGTAGCGAGCCATTGTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAgcc                     <  1:118676/99‑3 (MQ=255)

                                                                                gTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGt                    <  2:1669296/100‑1 (MQ=255)

                                                                                     cTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGCGTCATTTTTAGTCATTGCAACTTAAGCCTTTGTGTTAGAGCGCAGTGTAcgcg               >  2:1276829/1‑100 (MQ=255)

                                                                                      tGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcgc              <  2:545245/100‑1 (MQ=255)

                                                                                      tGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAgcgc              >  1:1595002/1‑100 (MQ=255)

                                                                                       ggCATGATAAACGAGCAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCt             <  2:2950345/100‑1 (MQ=255)

                                                                                        gCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTg            <  2:1179473/100‑1 (MQ=255)

                                                                                        gCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTg            <  1:1574761/100‑1 (MQ=255)

                                                                                        gCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTg            >  2:2681770/1‑100 (MQ=255)

                                                                                         aagtttcaatgAGTAAAAATGACTCGCTACCCGCAGCAGGCGAGTCATTTTTACTCATTGAAACTTAAGAATATGTGTTACAGCGCAGGGTAAGCGCTGa           >  1:2882148/11‑100 (MQ=2)

                                                                                          aTGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGan          <  2:1416572/100‑2 (MQ=255)

                                                                                          aTGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGAt          <  2:2063245/100‑1 (MQ=255)

                                                                                           tGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATa         >  2:1540622/1‑100 (MQ=255)

                                                                                            gATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaa        >  2:528200/1‑100 (MQ=255)

                                                                                              tAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaaaa      >  1:1464116/1‑100 (MQ=255)

                                                                                              tAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATaaaa      >  1:1645391/1‑100 (MQ=255)

                                                                                               aaaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAg     <  2:2869838/100‑1 (MQ=255)

                                                                                                aaCGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCACTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGa    >  1:547521/1‑100 (MQ=255)

                                                                                                  cGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATg  <  1:2601784/100‑1 (MQ=255)

                                                                                                   gAGTAAAAATGCCTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGAt   <  1:1344834/98‑1 (MQ=255)

TTTCATGGTTAATCCTCCAGTGGTTGTCTTACTTCGGGTATTGCATCTTCCGTGCCAACGATGAAACGCTGATATGACGGGTAATCTGGCATGATAAACGAGTAAAAATGACTCGCCTGCTGCGGGTAGCGAGTCATTTTTACTCATTGAAACTTAAGCCTTTGTGTTACAGCGCAGGGTAAGCGCTGATAAAAGATG  >  NC_000913/4201683‑4201880

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.