New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 225998NA (NA)27 (0.230) 17/190 11.7 NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913 = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 104 total aligned reads displayed.

GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACA  >  NC_000913/225926‑226112
                                                                                         |                                                                                                 
ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                                         >  2:2720404/1‑100 (MQ=33)
ggTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGc                                                                                         >  1:2172574/1‑100 (MQ=32)
 gTTAATTAGGCTAACCGGGGGAACTGAAACATCTAAGTTCACCGAGGAAAAGAAATCAACCGAGAGCCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                                            <  1:2551398/96‑1 (MQ=11)
  ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                                       <  1:1668401/100‑1 (MQ=33)
    aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCag                                                                                     >  1:2076768/1‑100 (MQ=32)
    aaTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCa                                                                                      >  1:613953/1‑99 (MQ=32)
      tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                                   >  2:2782887/1‑100 (MQ=33)
        aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                 <  2:1338061/100‑1 (MQ=33)
        aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                 <  1:2319547/100‑1 (MQ=33)
        aGGCGAACCGGGGGAACTGAAACATCTAAGTACACCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                                 <  2:706951/100‑1 (MQ=17)
         ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                >  1:502178/1‑100 (MQ=33)
         ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                >  1:1424214/1‑100 (MQ=33)
         ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                >  1:2591354/1‑100 (MQ=32)
          gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                               <  1:945639/100‑1 (MQ=33)
           cGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCCACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGa                                                                              >  1:580879/1‑100 (MQ=17)
                cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                                         <  2:2128611/100‑1 (MQ=33)
                cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                                         <  2:1493235/100‑1 (MQ=33)
                cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                                         <  2:13291/100‑1 (MQ=33)
                  ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGCGGAGCCCAGAGCCAGAATCAgtg                                                                       >  1:722177/1‑100 (MQ=12)
                  ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                       <  2:2958438/100‑1 (MQ=33)
                  ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                       <  1:2730400/100‑1 (MQ=33)
                  ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAAGCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                       <  1:2845036/100‑1 (MQ=18)
                   gggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                                      >  1:1459020/1‑100 (MQ=32)
                    ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                                     >  1:2410325/1‑100 (MQ=32)
                    ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                                     <  2:86216/100‑1 (MQ=33)
                      aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGTGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                   <  2:1374963/100‑1 (MQ=18)
                      aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                   >  2:1040797/1‑100 (MQ=33)
                      aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                   <  2:1193053/100‑1 (MQ=33)
                        cTGGAACAGCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                 <  1:2810541/100‑1 (MQ=12)
                        cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                 <  1:1516963/100‑1 (MQ=33)
                         tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                   >  1:182850/1‑97 (MQ=32)
                          gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGCGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                               >  2:1402923/1‑100 (MQ=17)
                          gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                               <  2:1221986/100‑1 (MQ=33)
                          gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                               >  1:1041208/1‑100 (MQ=32)
                          gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                               >  2:355726/1‑100 (MQ=33)
                           aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTa                                                              <  2:1075297/100‑1 (MQ=33)
                           aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGAGAGCGGACAGGGAGGGGCCCCGACACTGAATCAGCGTGGGTGtt                                                               >  1:2778534/1‑99 (MQ=11)
                            aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                                             >  2:373838/1‑100 (MQ=32)
                             aCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCCTGAAGCAgtgtgggcgcga                                                              >  1:2290797/1‑91 (MQ=11)
                              cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                                           >  2:926067/1‑100 (MQ=32)
                               aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTgg                                                          >  2:2341143/1‑100 (MQ=33)
                                tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                                         >  1:2358418/1‑100 (MQ=33)
                                tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                                         <  2:379565/100‑1 (MQ=33)
                                gcTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGGGGCGAGCGAACGGGCAGGAGCCCAGAGCCTGAATAAGCGTGTGTGGTAGTgg                                                          >  1:1381605/2‑99 (MQ=11)
                                 cTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGACCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGCaa                                                        >  2:937004/1‑100 (MQ=12)
                                 cTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGaa                                                        >  2:586505/1‑100 (MQ=33)
                                  tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                       <  2:365248/100‑1 (MQ=33)
                                  tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                       >  1:2121141/1‑100 (MQ=32)
                                   aaGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGc                                                      >  1:200468/1‑100 (MQ=32)
                                    aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCg                                                     <  2:2154924/100‑1 (MQ=33)
                                       aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTcn                                                  <  2:2277518/100‑2 (MQ=18)
                                        ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                                 <  1:2514451/100‑1 (MQ=33)
                                         cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGCGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                                >  1:513674/1‑100 (MQ=17)
                                          ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                                               >  1:661448/1‑100 (MQ=18)
                                             aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAg                                            <  2:91327/100‑1 (MQ=33)
                                              ggAAAAGAAATCAACCGAGATTCCCCCCGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATGAGGGTGTGTGTTAGTGGAAGCGTCTGGACAg                                            >  1:746525/1‑99 (MQ=11)
                                              ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                                           <  1:1355075/100‑1 (MQ=33)
                                                aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGATCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                                         <  1:1402917/100‑1 (MQ=17)
                                                   aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                                      <  2:2076777/100‑1 (MQ=33)
                                                    gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                                     <  2:179298/100‑1 (MQ=33)
                                                    gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                                     >  1:338264/1‑100 (MQ=33)
                                                     aaaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGcgcgcg                                     >  2:80077/1‑99 (MQ=33)
                                                      aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGAt                                   <  2:1382785/100‑1 (MQ=33)
                                                      aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGAt                                   >  1:1312562/1‑100 (MQ=33)
                                                       aTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                                  >  1:488957/1‑100 (MQ=32)
                                                         cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACa                                >  2:1902399/1‑100 (MQ=33)
                                                          aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                               >  1:531319/1‑100 (MQ=32)
                                                           aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAgg                              >  1:1304281/1‑100 (MQ=32)
                                                            ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg                             <  2:2006347/100‑1 (MQ=32)
                                                            ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg                             >  2:276088/1‑100 (MQ=33)
                                                             cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt                            <  1:926063/100‑1 (MQ=33)
                                                              gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGACTCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg                           >  2:196617/1‑100 (MQ=18)
                                                                gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc                         <  2:1424220/100‑1 (MQ=33)
                                                                gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGAc                         <  2:680003/100‑1 (MQ=33)
                                                                 aTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGCGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACa                        >  2:1247879/1‑100 (MQ=17)
                                                                   tCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGc                      >  2:792086/1‑100 (MQ=33)
                                                                   tCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGc                      <  2:1118054/100‑1 (MQ=33)
                                                                   tCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGc                      >  2:2439222/1‑100 (MQ=32)
                                                                      cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc                   >  2:155759/1‑100 (MQ=32)
                                                                        cAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGt                 <  1:355725/100‑1 (MQ=33)
                                                                          gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac               <  2:1677194/100‑1 (MQ=33)
                                                                          gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac               <  1:373837/100‑1 (MQ=33)
                                                                          gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac               <  2:1041213/100‑1 (MQ=33)
                                                                          gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac               <  2:502180/100‑1 (MQ=33)
                                                                            aGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTacac             >  1:295776/1‑100 (MQ=32)
                                                                             gcggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTAcaca            <  1:1134857/100‑1 (MQ=33)
                                                                             gcggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTAcaca            >  1:457655/1‑100 (MQ=32)
                                                                               ggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGATAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaa          <  2:2108128/100‑1 (MQ=18)
                                                                               ggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaa          >  1:849725/1‑100 (MQ=32)
                                                                               ggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaa          >  2:728681/1‑100 (MQ=33)
                                                                               ggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaa          >  1:183559/1‑100 (MQ=33)
                                                                                   agcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATg      <  2:7916/100‑1 (MQ=32)
                                                                                   agcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATg      >  2:1671615/1‑100 (MQ=33)
                                                                                    gcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGc     >  2:2040643/1‑100 (MQ=33)
                                                                                    gcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGc     >  1:2049578/1‑100 (MQ=33)
                                                                                     cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca    <  2:488959/100‑1 (MQ=33)
                                                                                     cgaACGGGGAGGAGCCCAGAGCCTGAATCAGGGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGATGACAGCCCCGTACACAAAAATGc     >  2:1665614/1‑99 (MQ=12)
                                                                                      gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcac   <  2:319367/100‑1 (MQ=33)
                                                                                       aaCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca  <  2:1075826/100‑1 (MQ=33)
                                                                                       aaCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGGCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcac   <  2:686191/99‑1 (MQ=17)
                                                                                         |                                                                                                 
GGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACA  >  NC_000913/225926‑226112

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.