| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,705,984 | 0 | T | G | 36.1% | 311.6 / 261.7 | 205 | intergenic (‑194/+114) | dppB/dppA | dipeptide/heme ABC transporter permease/dipeptide/heme ABC transporter periplasmic binding protein; dipeptide chemotaxis receptor |
| Reads supporting (aligned to +/- strand): ref base T (60/71); new base G (69/5); total (129/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.61e-13 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.19e-02 | |||||||||||
Only 100 of 206 total aligned reads displayed.
TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTC > NC_000913/3705885‑3706082 | ttGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCt < 1:2833457/100‑1 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 2:1877399/1‑100 (MQ=255) gctgcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTa > 1:2187820/1‑100 (MQ=255) gcCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATcc > 1:2124354/1‑100 (MQ=255) cGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCgg < 2:2829031/100‑1 (MQ=255) gATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGcc < 2:33646/100‑1 (MQ=255) gcgcTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCCGATGCGGCGTTAACGCCTTATCCGGCCTaaa < 2:2017278/100‑3 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGCCAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 1:781395/1‑100 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAAt < 2:129548/99‑1 (MQ=255) gCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATc > 2:945896/1‑100 (MQ=255) cACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCg < 2:440234/100‑1 (MQ=255) aCGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGt > 2:1716547/1‑100 (MQ=255) gCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGc < 1:2974187/100‑1 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCa > 1:2014835/1‑100 (MQ=255) cAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGACGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCa < 1:1853837/100‑1 (MQ=255) ggCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑tt > 1:1504437/1‑100 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCa > 2:2749211/1‑100 (MQ=255) cacaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCa < 1:2534333/100‑1 (MQ=255) acaGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCaa < 2:1760547/100‑1 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACAtt < 2:125179/100‑1 (MQ=255) ccACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACAtt < 2:354389/100‑1 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTg > 2:122053/1‑100 (MQ=255) cACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTg > 1:2774953/1‑100 (MQ=255) aCCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGc < 1:1047383/100‑1 (MQ=255) cGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑g < 2:2135164/100‑1 (MQ=255) ggTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑Ga‑a > 2:1614804/1‑100 (MQ=255) ataCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑At‑tt > 1:766061/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑At‑ttt > 2:2655802/1‑100 (MQ=255) taCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑At‑ttt > 2:806059/1‑100 (MQ=255) aCAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTc < 1:2313453/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCg < 1:429413/100‑1 (MQ=255) cAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCg < 2:1088951/100‑1 (MQ=255) cAGATTGCTGACAACGTGCGCGTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑AAAGTCGTATAAACTGCAATACATTgaatttatacg < 2:709753/100‑11 (MQ=14) aGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGt > 2:1866060/1‑100 (MQ=255) gATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTa < 2:2630690/100‑1 (MQ=255) aTTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAg < 1:714317/100‑1 (MQ=255) ttgttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAgg < 1:2908299/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGcc < 2:1056254/100‑1 (MQ=255) gttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGcc < 2:571259/100‑1 (MQ=255) ttgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCt > 1:13296/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTg > 1:896462/1‑100 (MQ=255) tgACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTg < 1:2391242/100‑1 (MQ=255) gACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAACTCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGa < 1:1644745/100‑1 (MQ=255) cAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATa > 1:11151/1‑100 (MQ=255) gTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCg > 2:1733813/1‑100 (MQ=255) tGCGCTTTGTTTATGCCGGATGCAGCATTAACGCCTTATCCGGCATAC‑AAAATCGTGCAAA‑TTCGAGAAATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCgg < 1:1783048/100‑1 (MQ=17) gcgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGa > 2:1422895/1‑100 (MQ=255) ctcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAg < 1:972095/98‑1 (MQ=255) cgcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCGATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAg < 1:659977/100‑1 (MQ=255) gcTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgc < 1:2398827/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcg < 1:1821906/100‑1 (MQ=255) cTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAgcg < 1:1422889/100‑1 (MQ=255) cttttgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAA‑TTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAgcgc > 2:695212/10‑100 (MQ=17) ntttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATc > 2:1638267/2‑100 (MQ=255) tgtaggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAA‑TTCAACAAATTGC‑‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAg > 2:2406988/6‑100 (MQ=18) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 2:2941901/100‑1 (MQ=255) ttATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAg < 1:2478080/100‑1 (MQ=255) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAGTTCGTGCAAA‑TTCAATAAATTGCA‑‑A‑TA‑TGACGTAGGCCTGATAAGCGTAGCGCATCAgg > 1:1945164/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAA‑TTCAATATATTGCA‑GG‑AA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAg > 2:1450379/5‑100 (MQ=18) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAA‑TCCAAAATATTGCA‑GG‑AG‑TTATGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:253099/5‑100 (MQ=21) gtaggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAACCGCGCAAA‑TTCAATATATTGCG‑GA‑GA‑AAATGTAGGCCTGATAAGCGTAGCGCATCAgg > 1:2513595/5‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAA‑TTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAgg > 2:773755/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATTGTGTAAA‑TTCAATAAATTGAT‑CG‑AT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAgg > 2:373817/4‑100 (MQ=21) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAA‑TTCAATATATTGCAGGG‑AC‑TAT‑GTAGGCCTGATAAGCATAGCGCATCAgg > 1:2565217/4‑100 (MQ=18) taggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACCTTGCTAA‑TTCAATATATTGCAGGG‑AC‑TAT‑GTAGGCCTGATAAGCATAGCGCATCAgg > 2:2350227/4‑100 (MQ=18) aggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCACGCAAA‑CTCAATATATTGCA‑GAGAT‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGc > 2:2804013/3‑100 (MQ=17) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGc > 2:2464123/3‑100 (MQ=18) aggCCGGATAAGGCGTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCACATCAGGc > 1:1729995/3‑100 (MQ=18) ngCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAA‑TTCAATATATTGCA‑GG‑AA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAGGCa > 2:2645807/2‑100 (MQ=18) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCGTGCAAA‑TTCAATACATTGCATGG‑GC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:957053/2‑100 (MQ=17) ggCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAA‑TTCAATATATTGCA‑AT‑CT‑TCTGGTAGGCCTGATAAGCATCGCGCATCAGGCa > 1:472855/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAA‑TTCAATATATTGTG‑GG‑CT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:74698/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAGTCGTATAAA‑TTCAATGTATTGCA‑GT‑TT‑ATTGGTAGGCCTGATAAGCGCAGCGCATCAGGCa > 2:256511/2‑100 (MQ=25) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAA‑TTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 1:366597/2‑100 (MQ=21) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAGCATGAAAA‑TTCAATATATTGCA‑GG‑AG‑CTGCGTAGGCCTGATAAGCGTAGCGCATCAGGCa > 2:1960166/2‑100 (MQ=18) ggCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAACTGTGCAAA‑TTCAATATATTGCA‑GG‑AA‑ACACGTAGGCCTGATAAGCGAAGCGCATCAGGCa > 2:545733/2‑100 (MQ=18) gCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAt > 2:285078/1‑100 (MQ=255) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAA‑TTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCag < 1:695210/100‑2 (MQ=17) gCCGGATAAGGCGTTTACGCCGCATCCGGCCTAC‑AAAACAGTGCAAA‑TTCAATATATTGCA‑AT‑CT‑TCTGGTAGGCCTGATAAGCATCGCGCATCAGGCaa > 1:891941/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAA‑TTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCag > 2:936288/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACCTGCAAA‑TTCAATATATTGCA‑GG‑AT‑ACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 2:2385627/1‑99 (MQ=18) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑AAAAACATGCAAA‑TTCAATAGATTGCA‑GAGAT‑TAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCaa > 1:2236509/1‑99 (MQ=17) gCCGGATAAGGCGTTCACGCCGCATCCGGCCTAC‑‑AAATCATGCAAA‑TCCAAAATATTGCA‑GG‑AG‑TTATGTAGGCCTGATAAGCGTAGCGCATCAGGCAtt > 1:1400691/1‑100 (MQ=21) ccggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAA‑TTCAACAAATTGC‑‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAttt > 2:1800455/9‑100 (MQ=18) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAA‑TTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:1167708/9‑98 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAA‑TTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:66101/9‑98 (MQ=21) ccggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCGCTTAAA‑TTCAATATATTGCA‑CC‑AT‑CCTCGTAGGCCTGATAAGCGTAGCGCATCAGGCaat > 2:601831/9‑98 (MQ=21) cggataaggcgTTTACGCCGCATCCGGCCTAC‑AAATTC‑TGCAAA‑TTCAACAAATTGC‑‑GA‑ATCCCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAtttg > 2:2438542/8‑99 (MQ=21) cggataaggcgTTCACGCCTTATCCGACCCAC‑AAAGTCTTGCAAA‑ATCAATAAATTGCA‑GG‑AA‑CGATGTAGGCCTGATAAGCGTAGCGCATCAGGCaact > 1:1586176/8‑97 (MQ=21) ggataaggcgTTTACGCCGCATCCGGCCTAC‑AAAAGCATGCAAA‑TTCAATATATTGCA‑GA‑GT‑TCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:64111/7‑100 (MQ=17) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAA‑TTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 2:2926011/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTACAAAAATCTTGCCAA‑TTCAATATATTGCA‑GG‑AC‑CAT‑GTAGGCCTGATAAGCGTAGCGCACCAGGCAgttt > 2:1600501/7‑100 (MQ=18) ggataaggcgTTCACGCCGCATCCGGCCTAC‑GAAATCGTGCTAA‑TTCAATATATTGTG‑GG‑CT‑CCACGTAGGCCTGATAAGCGTAGCGCATCAGGCAgttt > 1:1695713/7‑100 (MQ=21) ggataaggcgTTCACGCCGCATCCGGCCTAC‑AAAATCATGAAAA‑TTCAATACATTGCA‑AG‑AT‑TTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCacgct > 1:1181880/7‑96 (MQ=17) ggataaggcgTTAACGCCGCATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCAtttt > 2:2082386/7‑100 (MQ=18) gataaggcgTTTACGCCGCATCCGGCCTAC‑AAAATCGTGCTAA‑TTCAATATATTGCA‑GA‑AA‑CCTTGTAGGCCTGATAAGCGTAGCGCATCAGGCAgtttt > 2:1668316/6‑100 (MQ=18) ggcgTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctt > 2:2099499/1‑100 (MQ=255) gTTAACTCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTtttgcctttg < 1:2065753/99‑1 (MQ=255) ccTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGt > 1:358117/1‑100 (MQ=255) cTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTc > 1:2264893/1‑100 (MQ=255) | TTGCTGCCGGATGGCGCTGCACGCAGAGGCACAGCGCCACCGGGTATACAGATTGTTGACAAAGTGCGCTTTGTTTATGCCGGATGCGGCGTTAACGCCTTATCCGGCCTAC‑AAAATCGTGCAAA‑TTCAATACATTGCA‑GA‑AT‑TTTCGTAGGCCTGATAAGCGGAGCGCATCAGGCATTTTTGCCTTTGCCATCAGTC > NC_000913/3705885‑3706082 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |