| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2655066 | NA (NA) | 17 (0.140) | 7/164 | NT | NA | noncoding (97/97 nt) | RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site | RIP183 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site |
| ? | NC_000913 | = 2835118 | NA (NA) | noncoding (52/82 nt) | REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences | REP195 (repetitive extragenic palindromic) element; contains 2 REP sequences | |||||
GGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2654961‑2655066‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACAATC < NC_000913/2835118‑2835020 GGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCA > 2:3019488/1‑100GGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCA > 2:2714604/1‑100 CGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATC > 1:2673093/1‑100 nAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG > 1:1470887/2‑100 CAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG > 1:1342933/1‑100 CAAATGCCTGATGCGCTACGCTTATAAGGCCTACAAGGGATTAGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCG > 1:600369/1‑100 AAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG < 2:26314/100‑1 ATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCCGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGG > 1:1997465/1‑98 GCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCCTA < 1:1103358/100‑1 GCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATGCGGCGTAAACGCCTTATCCGGCCTA < 1:1307086/100‑1 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAG > 1:1365182/1‑100 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAG > 1:927078/1‑100 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAG > 1:2753428/1‑100 AGGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAG > 1:2606585/1‑100 GGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAac > 1:2154293/1‑98 GGCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGC > 2:3000750/1‑100 GCCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCC > 2:2886875/1‑100 CCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC > 2:1368367/1‑100 CCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC > 1:3316185/1‑100 CCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC > 2:94815/1‑100 CCGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCC > 1:2301291/1‑100 CGGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCA > 2:2379035/1‑100 GGATAAGGCGTTTCCGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCAC > 1:1765075/1‑100 GGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCAC > 1:2319180/1‑100 GGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCAC > 2:823544/1‑100 GGATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCAC > 1:1360331/1‑100 GATAAGGCGTTTACGCCGCATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACC > 1:1105693/1‑100 ATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCCTCCGACATTTTAGGCACAGTAGCCCCCCTACATCGGCAATGTTTTCA > 1:1256678/1‑100 ATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCA < 2:108210/100‑1 ATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCA < 1:2881834/100‑1 ATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCA > 2:1981478/1‑100 ATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCA < 1:1803257/100‑1 ATCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCA < 2:2761198/100‑1 TCCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAA > 2:732067/1‑100 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC > 1:160833/1‑100 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC < 2:7795/100‑1 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC > 2:3506609/1‑100 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC < 1:1454942/100‑1 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC < 2:2589592/100‑1 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC > 2:2548170/1‑100 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAAC < 2:1942906/100‑1 CCGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAA > 1:1269946/1‑99 CGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACA > 1:309907/1‑100 CGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACA > 2:3459307/1‑100 CGGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACA > 2:901970/1‑100 CGGCCTACACATGCGTCCCCATAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACAATTCAGGCACAGTAGCACACCTACATCGGCAATGTTTTCAACA > 1:2494730/1‑100 GGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACAA > 1:1145394/1‑100 GGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACAA > 2:1997675/1‑100 GGCCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACAA > 2:929104/1‑100 CCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACAATC < 2:2749499/100‑1 GGCGCAAATGCCTGATGCGCTACGCTTATCAGGCCTACAAGGGATTCGCAATTTGTTGAATTTGCAGAATTTGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2654961‑2655066‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atccggcCTACACATGCGTCCCCGTAGGTCGGATAAGACGCGCCAGCGTCGCATCCGACATTTTAGGCACAGTAGCCCACCTACATCGGCAATGTTTTCAACAATC < NC_000913/2835118‑2835020 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |