New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 937227NA (NA)12 (0.100) 8/162 NT NA noncoding (4/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 = 937259 NA (NA)noncoding (36/36 nt) REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences REP85 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 152 total aligned reads displayed.

TCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937128‑937326
                                                                                                   |                                                                                                   
tCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTAT                                                                                                     <  1:1991453‑M1/100‑1 (MQ=255)
  gAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgc                                                                                                   >  1:3164193‑M1/1‑98 (MQ=255)
  gAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATg                                                                                                    <  1:1338911‑M1/99‑2 (MQ=255)
  gAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTAAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgc                                                                                                   >  1:3365371‑M1/1‑98 (MQ=255)
   aaCAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgcc                                                                                                  >  2:1653550‑M1/1‑97 (MQ=255)
     cAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccgg                                                                                                <  2:480258‑M1/100‑6 (MQ=255)
       gATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggat                                                                                              <  2:1245591‑M1/100‑8 (MQ=255)
          ggAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAg                                                                                           >  2:625728/1‑100 (MQ=255)
          ggAAGCGCAGGGGATTGTCAACGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAg                                                                                           >  1:2165993/1‑100 (MQ=255)
           gAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAgg                                                                                          <  2:2932822/100‑1 (MQ=255)
            aaGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGgc                                                                                         <  2:2594960/100‑1 (MQ=255)
                gcAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCgg                                                                                     <  2:1373756/100‑1 (MQ=255)
                 cAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGt                                                                                    <  2:2889402/100‑1 (MQ=255)
                 cAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGt                                                                                    <  2:1154229/100‑1 (MQ=255)
                 cAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGt                                                                                    <  2:1324926/100‑1 (MQ=255)
                   ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAg                                                                                  <  2:729825/100‑1 (MQ=255)
                   ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAg                                                                                  >  2:1703106/1‑100 (MQ=255)
                   ggggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAg                                                                                  >  2:2697918/1‑100 (MQ=255)
                    gggATTGTCAGCGAACAGGGGCACAACGGTAATTGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGc                                                                                 >  2:3070923/1‑100 (MQ=255)
                     ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGGAGTGCTGGCCCCACCGACGTTTGACTAACTAATGCATCGTATGCCGGATCATGCGCGGTAGCg                                                                                >  1:855427/1‑100 (MQ=255)
                     ggATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCg                                                                                <  1:1959216/100‑1 (MQ=255)
                        ttGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCg                                                                             <  2:2828132/100‑1 (MQ=255)
                          gTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgcctta                                                                           >  1:651183‑M1/1‑74 (MQ=255)
                          gTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTcaga                                                                           >  2:1658346/1‑97 (MQ=255)
                            cAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATC                                                                         <  1:203845‑M2/100‑1 (MQ=255)
                             tctgaacAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatcc                                                                        <  2:1277245‑M1/97‑30 (MQ=255)
                              gCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccg                                                                       <  1:3047537‑M1/100‑31 (MQ=255)
                               cGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccgg                                                                      <  1:2796390‑M1/100‑32 (MQ=255)
                               cGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGG                                                                      >  2:15417‑M2/1‑100 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccaga                                                                     >  1:1277238‑M1/1‑68 (MQ=255)
                                gAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGC                                                                     <  1:214716‑M2/100‑1 (MQ=255)
                                 aaCAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggca                                                                    <  2:651186‑M1/100‑34 (MQ=255)
                                  aCAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggcat                                                                   <  1:719085‑M1/100‑35 (MQ=255)
                                  aCAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCACCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccttatccggcat                                                                   <  2:762741‑M1/100‑35 (MQ=255)
                                   cAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATgccggatgcgacgctaccgcgccgtatccggcat                                                                   <  1:2503796‑M1/99‑35 (MQ=255)
                                     ggggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCActct                                                                <  2:171627/100‑1 (MQ=255)
                                       ggCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTAt                                                              <  2:1495049/100‑1 (MQ=255)
                                        gCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATc                                                             <  2:2637366/100‑1 (MQ=255)
                                         cacaACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATc                                                             <  1:2253470/99‑1 (MQ=255)
                                         cacaACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCa                                                            >  1:290728/1‑100 (MQ=255)
                                           caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAAc                                                          <  2:3065263/100‑1 (MQ=255)
                                           caACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAAc                                                          <  2:3032928/100‑1 (MQ=255)
                                                gTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaa                                                     <  1:1143597/100‑1 (MQ=255)
                                                gTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGaaa                                                     >  1:182585/1‑100 (MQ=255)
                                                    tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                 <  1:219289/100‑1 (MQ=255)
                                                    tCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGATAGCGTCGCATCCGGCACTCTATCAACTGAAAATTc                                                 <  1:777361/100‑1 (MQ=255)
                                                     cGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCa                                                >  1:899818/1‑100 (MQ=255)
                                                      gTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  2:290729/100‑1 (MQ=255)
                                                       tGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGt                                              >  2:3143935/1‑100 (MQ=255)
                                                          aGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAtt                                           >  2:2184168/1‑100 (MQ=255)
                                                          aGTGCTGGCCCCACCGCCGTTTGACTAACGAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAg                                               <  1:766266/96‑1 (MQ=255)
                                                           gTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAttt                                          <  1:175663/100‑1 (MQ=255)
                                                            tGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAtttt                                         <  1:634108/100‑1 (MQ=255)
                                                            tGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTAtttt                                         <  2:3447298/100‑1 (MQ=255)
                                                             gCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttc                                        <  2:3242609/100‑1 (MQ=255)
                                                              cTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                       <  2:1053933/100‑1 (MQ=255)
                                                              cTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttct                                       <  1:3161441/100‑1 (MQ=255)
                                                               tGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGAATACGGCGCGGTAACGTCGAATCCGGCACGCTATCAACTGAACATCCAGAATTttctt                                      >  1:1936598/1‑100 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     <  2:3356247/100‑1 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     >  1:841072/1‑100 (MQ=255)
                                                                ggCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTttcttc                                     <  1:1854864/100‑1 (MQ=255)
                                                                 gCCCCACCGCCGTTTGACTAACTACTGCAGCGTATGCCGGATAAGGCTCTGTAGCGTCGCATCCTGCACCCTATCAACTGAAAATTCAGTATTttcttc                                     <  1:3071463/99‑1 (MQ=255)
                                                                 gCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTtcttct                                    >  1:1885549/1‑100 (MQ=255)
                                                                    ccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTc                                 <  2:1122156/100‑1 (MQ=255)
                                                                    ccACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTc                                 <  2:2794081/100‑1 (MQ=255)
                                                                     cACCGCCGTATGACTAACTAATGCATCGTATGCCGGCTAAGGCGCGGTAGCGTCGCATCCTGAGCTCTATCAACTGACAATTCAGTATTTTCTTCTTTcc                                >  1:1448197/1‑100 (MQ=255)
                                                                       ccgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTc                              <  1:438794/100‑1 (MQ=255)
                                                                        cgccgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCa                             <  1:3263109/100‑1 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          >  2:2459070/1‑100 (MQ=255)
                                                                           cgTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGc                          <  1:1115442/100‑1 (MQ=255)
                                                                            gTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCt                         <  1:219691/100‑1 (MQ=255)
                                                                             tttGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTg                        >  2:3141708/1‑100 (MQ=255)
                                                                             tttGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTg                        >  1:3305266/1‑100 (MQ=255)
                                                                             tttGACTAACTAACGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCTCTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCt                         <  1:412358/99‑1 (MQ=255)
                                                                                gACTAACTAATGCATCGTATGCCGGATACGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatt                     >  2:1209486/1‑100 (MQ=255)
                                                                                 actaactaATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                    >  2:1640819/1‑100 (MQ=255)
                                                                                 actaactaATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                    <  2:2587886/100‑1 (MQ=255)
                                                                                  ctaactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGattat                   >  2:1978297/1‑100 (MQ=255)
                                                                                  ctaactaaTGCAGCGTATGCCGGATAAGGCGCGGTAGCGTCGCAGCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGatta                    <  2:3012646/99‑1 (MQ=255)
                                                                                   taactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacggcggtggggccagcacttcacgatta                  <  1:3289414‑M2/100‑52 (MQ=255)
                                                                                    aactaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGAttatta                 <  1:1640812/100‑1 (MQ=255)
                                                                                     actaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAg                >  2:1652233/1‑100 (MQ=255)
                                                                                      ctaaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGc               >  2:393939/1‑100 (MQ=255)
                                                                                       taaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGcc              <  2:966739/100‑1 (MQ=255)
                                                                                        aaTGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCt             >  1:2427728/1‑100 (MQ=255)
                                                                                         aTGCATCGTATGCCGGAAAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTg            <  1:2703639/100‑1 (MQ=255)
                                                                                           gCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGCTTATTAGCCTGGa          >  2:1966601/1‑100 (MQ=255)
                                                                                           gCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGa          >  1:2577196/1‑100 (MQ=255)
                                                                                            cATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGaa         >  2:3423219/1‑100 (MQ=255)
                                                                                            cATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGaa         >  2:507212/1‑100 (MQ=255)
                                                                                             aTCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAAt        <  2:2176242/100‑1 (MQ=255)
                                                                                               cGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATag      >  1:301300/1‑100 (MQ=255)
                                                                                                gTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATaga     <  2:2427744/100‑1 (MQ=255)
                                                                                                 tATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagag    <  1:2974593/100‑1 (MQ=255)
                                                                                                 tATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagag    >  1:3079755/1‑100 (MQ=255)
                                                                                                  aTGCCGGATACGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacggcggtggggccagcacttcacgattaccgttgtgcccctg    <  1:2503796‑M2/99‑66 (MQ=255)
                                                                                                  aTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacggcggtggggccagcacttcacgattaccgttgtgcccctgt   <  1:719085‑M2/100‑67 (MQ=255)
                                                                                                  aTGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGACTGGAATatag    >  1:3279980/1‑99 (MQ=255)
                                                                                                   tGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCatacgatgcattagttagtcaaacggcggtggggccagcacttcacgattaccgttgtgcccctgtt  <  2:651186‑M2/100‑68 (MQ=255)
                                                                                                   tGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATagagag  <  1:3357837/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
TCGAACAGATGGAAGCGCAGGGGATTGTCAGCGAACAGGGGCACAACGGTAATCGTGAAGTGCTGGCCCCACCGCCGTTTGACTAACTAATGCATCGTATGCCGGATAAGGCGCGGTAGCGTCGCATCCGGCACTCTATCAACTGAAAATTCAGTATTTTCTTCTTTCCTCAAGCTGATTATTAGCCTGGAATAGAGAG  >  NC_000913/937128‑937326

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.