New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2950598 =NA (NA)11 (0.100) 5/158 NT NA intergenic (+25/+37) argA/recD amino acid N‑acetyltransferase and inactive acetylglutamate kinase/exonuclease V (RecBCD complex), alpha chain
?NC_000913 2950615 = NA (NA)noncoding (3/14 nt) REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences REP207 (repetitive extragenic palindromic) element; contains 1 REP sequences

Only 100 of 175 total aligned reads displayed.

TACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950500‑2950697
                                                                                                  |                                                                                                   
tACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACAt                                                                                                    >  2:2242611/1‑100 (MQ=255)
  cTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGc                                                                                                  >  2:1140353/1‑100 (MQ=255)
    gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCg                                                                                                 >  1:3449682/1‑99 (MQ=255)
    gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  2:1029167/1‑100 (MQ=255)
    gCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGt                                                                                                >  1:1574228/1‑100 (MQ=255)
     cccGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTa                                                                                               >  2:1311994/1‑100 (MQ=255)
       cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                             >  1:1298442/1‑100 (MQ=255)
       cGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAac                                                                                             >  1:429140/1‑100 (MQ=255)
        gagaGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAaca                                                                                            <  2:3228474/100‑1 (MQ=255)
         agagCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAacac                                                                                           <  1:2824003/100‑1 (MQ=255)
            gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:1030501/1‑100 (MQ=255)
            gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  2:2143809/1‑100 (MQ=255)
            gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  1:3268677/1‑100 (MQ=255)
            gCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCg                                                                                        >  2:1950454/1‑100 (MQ=255)
             cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  1:2914431/1‑100 (MQ=255)
             cAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGt                                                                                       >  1:2812615/1‑100 (MQ=255)
              aaaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTa                                                                                      >  2:1455391/1‑100 (MQ=255)
               aaaaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTAc                                                                                     >  2:477957/1‑100 (MQ=255)
                 aaGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGt                                                                                   <  2:2814072/100‑1 (MQ=255)
                  aGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTc                                                                                  <  1:1876252/100‑1 (MQ=255)
                   gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 <  1:1732611/100‑1 (MQ=255)
                   gCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCg                                                                                 <  1:719451/100‑1 (MQ=255)
                    cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGt                                                                                   >  2:360486/1‑97 (MQ=255)
                    cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGc                                                                                >  1:59587/1‑100 (MQ=255)
                    cAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATAGTCGGATGCGACATGCGTAACACTCGTACGTCGc                                                                                >  1:1415856/1‑100 (MQ=255)
                     aGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCa                                                                               >  1:3178586/1‑100 (MQ=255)
                     aGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCa                                                                               <  1:3141250/100‑1 (MQ=255)
                       cactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATc                                                                             >  1:1113878‑M1/76‑100 (MQ=255)
                       cactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATc                                                                             >  1:1919415‑M1/76‑100 (MQ=255)
                       cactcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaatcgtcggatgcgacATGCGTAACACTCGTACGTCGCATc                                                                             >  1:1698403‑M1/76‑100 (MQ=255)
                        tGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:1180192/1‑100 (MQ=255)
                        tGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:1643620/1‑100 (MQ=255)
                        actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  2:727909‑M1/75‑100 (MQ=255)
                        actcgtactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATcc                                                                            >  1:2369022‑M1/75‑100 (MQ=255)
                          tcgtactgagcggcgcagtggtcgggctgcgttgtttagttcatgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCg                                                                           >  1:2114554‑M1/73‑99 (MQ=255)
                          tACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGCTGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATcccg                                                                          >  1:2874773/1‑98 (MQ=255)
                           aCAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGc                                                                         <  2:684038/100‑1 (MQ=255)
                             tactgagcggcgcagtggtctggcggcgttgtttagttcacgggaataaacgtaattgccggatgcgacATGCGTAACACTCGTACGTCGCATCCGGCaa                                                                       >  2:2192882‑M1/70‑100 (MQ=255)
                              aCTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAt                                                                      >  2:2505070/1‑100 (MQ=255)
                               cTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAtt                                                                     <  2:2266458/100‑1 (MQ=255)
                               cTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAAtt                                                                     >  1:3361812/1‑100 (MQ=255)
                                 aCCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTAc                                                                   >  1:1436154/1‑100 (MQ=255)
                                  ccAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACg                                                                  >  1:615643/1‑100 (MQ=255)
                                  ccAGCGTAAATCCAAAGGGATGATGGCGGATTTAGGGTAAGAGATGAAAATAGTCGTATGCGACAAGCGTAACACTCGTACATCGCATCCGGCAATTACg                                                                  >  1:1592616/1‑100 (MQ=255)
                                    aGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGtt                                                                <  1:1455384/100‑1 (MQ=255)
                                     gCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGttt                                                               >  2:3065704/1‑100 (MQ=255)
                                         aaaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTc                                                           <  2:1992776/100‑1 (MQ=255)
                                          aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  2:2812633/100‑1 (MQ=255)
                                          aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  1:857049/100‑1 (MQ=255)
                                          aaTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTcc                                                          <  1:3074095/100‑1 (MQ=255)
                                           aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTccc                                                         >  2:1077282/1‑100 (MQ=255)
                                           aTCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTccc                                                         >  1:1995389/1‑100 (MQ=255)
                                              cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      <  2:2781096/100‑1 (MQ=255)
                                              cAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      >  2:3535123/1‑100 (MQ=255)
                                               aaaGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTg                                                      <  1:1479773/99‑1 (MQ=255)
                                                 aGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTGTTCCCGTGAAc                                                   <  2:2273873/100‑1 (MQ=255)
                                                  gtgtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACt                                                  <  1:3513255/100‑1 (MQ=255)
                                                  gtgtTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACt                                                  >  2:3432270/1‑100 (MQ=255)
                                                     ttGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaaa                                               <  2:560594/100‑1 (MQ=255)
                                                     ttGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTaaa                                               >  2:149221/1‑100 (MQ=255)
                                                      tGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaac                                              >  2:3506877/1‑100 (MQ=255)
                                                         tGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAaacaac                                           <  2:2889780/100‑1 (MQ=255)
                                                         tGGCGGAATTAGGGTAAGAAATGAAAATAGTCAGATGCGACATGCGTAAAACACGTAAGTCAAATAAGACAATTACGTTTATTCCAGTAAAATAaacaac                                           >  1:3400189/1‑100 (MQ=255)
                                                          ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  1:1176916/1‑100 (MQ=255)
                                                          ggCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  1:476186/1‑100 (MQ=255)
                                                          ggCGGATTTAGGGGAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcg                                          >  1:1986757/1‑100 (MQ=255)
                                                           gCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgc                                         >  2:2906387/1‑100 (MQ=255)
                                                            cGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCCATTACGTTTATTCCCGTGAACTAAACAAcgcc                                        <  1:2991223/100‑1 (MQ=255)
                                                            cGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgcc                                        >  2:1837202/1‑100 (MQ=255)
                                                            cGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgcc                                        >  2:2560/1‑100 (MQ=255)
                                                             ggATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAAcgccg                                       <  2:2050036/100‑1 (MQ=255)
                                                               aTTTAGGGTAAGCGATGAAAATGGTCGGATGCGACATGCGTAACGCTCGTACGTCGCATCCGGTAATTACGTTTATTTCCGTGATCTAAACAAcgcgg                                       <  1:2431629/98‑3 (MQ=255)
                                                               aTTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACgccgcc                                     <  2:3195958/100‑1 (MQ=255)
                                                               aTTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACgccgcc                                     <  2:3147182/100‑1 (MQ=255)
                                                                tttAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCa                                    >  2:2900192/1‑100 (MQ=255)
                                                                  taaggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATACCCGTGAACTAAACAACGCCGCCAGa                                  <  1:1973767/97‑1 (MQ=255)
                                                                  tAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGa                                  <  2:1687998/100‑1 (MQ=255)
                                                                   aGGGTAAGCGATGAAAATAGTCTGATCCTACATGAGTACAACTTGTACCCCGCACCCGCCAATTACTTTTATTCCCGTGAACTAAACAACGCCGCCAGAc                                 <  1:820157/100‑1 (MQ=255)
                                                                    gggTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGAcc                                >  1:771276/1‑100 (MQ=255)
                                                                      gTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCAc                              >  2:2381015/1‑100 (MQ=255)
                                                                      gTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCAc                              >  1:3397649/1‑100 (MQ=255)
                                                                         aGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgc                           <  2:604082/100‑1 (MQ=255)
                                                                         aGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGCCGCATCCGGCAATTACGTTTATTCCGGTAAACTAAACAACGCCGCCAGACCACTgc                           <  2:1718021/100‑1 (MQ=255)
                                                                          gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          <  1:2505054/100‑1 (MQ=255)
                                                                          gCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTgcg                          >  2:3270185/1‑100 (MQ=255)
                                                                            gATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgcc                        <  1:1670088/100‑1 (MQ=255)
                                                                            cttGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGcgcc                        <  2:320280/98‑1 (MQ=255)
                                                                                aaaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTc                    <  2:1307457/100‑1 (MQ=255)
                                                                                aaaaTCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCATGAACTAAACAACGCCGCCAGACCACTGCGCCGCTc                    <  1:2543320/100‑1 (MQ=255)
                                                                                    tcgtcgGATGCTACATGCGTAACACTCGTACGTCGCATCCGACAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTa                <  1:695097/100‑1 (MQ=255)
                                                                                     cgtcgGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTAc               <  2:78356/100‑1 (MQ=255)
                                                                                          gatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg          >  1:291601‑M1/9‑100 (MQ=255)
                                                                                          gatgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTg          <  1:528911‑M1/92‑1 (MQ=255)
                                                                                           atgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCCCCAGACCACTGCGCCGCTCAGTACGAGTgg         <  2:2667433‑M1/93‑1 (MQ=255)
                                                                                            tgcgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGc        >  2:3436163‑M1/7‑100 (MQ=255)
                                                                                              cgacATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGa      >  2:1401968‑M1/5‑100 (MQ=255)
                                                                                                acATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGAtt    <  2:2837287‑M1/98‑1 (MQ=255)
                                                                                                acATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGAt     >  1:2659289‑M1/3‑99 (MQ=255)
                                                                                                 cATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTg   <  2:864978‑M1/99‑1 (MQ=255)
                                                                                                  aTGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGc  >  1:45342/1‑100 (MQ=255)
                                                                                                  |                                                                                                   
TACTGCCCGAGAGCAAAAAGCAGTTGTACAACTACCAGCGTAAATCCAAAGTGTTGATGGCGGATTTAGGGTAAGCGATGAAAATCGTCGGATGCGACATGCGTAACACTCGTACGTCGCATCCGGCAATTACGTTTATTCCCGTGAACTAAACAACGCCGCCAGACCACTGCGCCGCTCAGTACGAGTGGCGATTGC  >  NC_000913/2950500‑2950697

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.