| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4035360 | NA (NA) | 32 (0.270) | 10/166 | NT | 100% | intergenic (+207/‑171) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon |
| ? | NC_000913 | = 4035384 | 0 (0.000) | intergenic (+231/‑147) | hemG/rrsA | protoporphyrin oxidase, flavoprotein/16S ribosomal RNA of rrnA operon | |||||
GTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAA > NC_000913/4035281‑4035459 | gTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG > 2:2861982‑M2/1‑100 (MQ=255)gTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG < 1:1981883‑M2/100‑1 (MQ=255)gTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG < 2:13351‑M2/100‑1 (MQ=255)gTTCTCCTGAGAACTCAGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG > 1:2006904‑M2/1‑100 (MQ=255) tttgcatgagaacTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGTAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAG > 1:2844048‑M2/7‑99 (MQ=255) ttCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGC > 2:1475318‑M2/1‑100 (MQ=255) tctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCG < 2:70714‑M2/100‑1 (MQ=255) tctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCG < 1:280925‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:1519402‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:627539‑M2/100‑1 (MQ=255) ctcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG < 2:146038‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC < 1:2926842‑M2/100‑1 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:2730978‑M2/1‑100 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:1708273‑M2/1‑100 (MQ=255) tcCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 2:2045188‑M2/1‑100 (MQ=255) tcCTGAGAACGCCGGCAGAGAAAGGAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGC > 1:159167‑M2/1‑100 (MQ=255) ccTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAGAAGCGAAGCGG < 1:3169838‑M2/98‑1 (MQ=255) aCTCCGGCAGAGAAAGCAAAAATAAATGCTTGACCCCGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGG > 1:627536‑M2/1‑91 (MQ=255) gaggagggaaggcGGATTACGCACATCCCGCGCCGCTGAGAAAAAGCGAAGCGGAacggggtgtgcataatacgccttcccgctacagagtcaagcattt > 1:1066783‑M2/6‑55 (MQ=255) aGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttct > 2:3282011‑M2/1‑53 (MQ=255) ggCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGgtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctct < 2:1759811‑M2/100‑56 (MQ=255) gCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgcttt < 2:1169969‑M2/100‑57 (MQ=255) gTATTATGCACACCCCGCGCCGCTGAGAAAAAGCAAAGCGGCacggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttct < 2:1591731‑M2/100‑59 (MQ=255) cacaCCCCGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccgga < 1:3281838‑M2/100‑67 (MQ=255) cacCCCGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagt < 1:1293193‑M2/100‑69 (MQ=255) acCCCGCGCCGCTGAGAAAAAGCGAAGCGGCacggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagtt < 1:1845760‑M2/100‑70 (MQ=255) ccccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttc < 1:3162729‑M2/100‑71 (MQ=255) cccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtggatcacacggcttgccgcaacagagacaagcatttatttttgctttctctgccggagttct < 1:2586782‑M2/100‑72 (MQ=255) ccGCGCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:1935651‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:2889496‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:954815‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:3420106‑M2/100‑73 (MQ=255) ccGCGCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctc < 1:3330954‑M2/100‑73 (MQ=255) cgcgCCGCTGAGAAAAAGCTAAGCGGCgcggggtgtgcataatacgccttcctgctacagagtcaagcatttatttttggtttctcttccggtggtctca < 1:1286672‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:1540216‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:1399034‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttattttttctttttcttccggagttctc < 1:634173‑M2/99‑73 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:243786‑M2/100‑74 (MQ=255) cgcgCCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctca < 2:798747‑M2/100‑74 (MQ=255) gcgcCGCTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 1:2673687‑M2/100‑75 (MQ=255) gcgcCGCTGAGAAAAAGCAAAGCGGCgcggggtgtgcataatacgctttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcag < 2:1051890‑M2/100‑75 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:1949838‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:2102128‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:1060979‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:2875980‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 2:3503‑M2/100‑76 (MQ=255) cgccgcTGAGAAAAAGCGAAGCGGCgcggggtgtgcataatacgccttcccgctacagagtcaagcatttatttttgctttctctgccggagttctcagg < 1:2875839‑M2/100‑76 (MQ=255) | GTTCTCCTGAGAACTCCGGCAGAGAAAGCAAAAATAAATGCTTGACTCTGTAGCGGGAAGGCGTATTATGCACACCCCGCGCCGCTGAGAAAAAGCGAAGCGGCACTGCTCTTTAACAATTTATCAGACAATCTGTGTGGGCACTCGAAGATACGGATTCTTAACGTCGCAAGACGAAA > NC_000913/4035281‑4035459 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |