New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4323250 =NA (NA)11 (0.090) 9/164 NT NA noncoding (5/87 nt) REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences
?NC_000913 4323280 = NA (NA)noncoding (35/87 nt) REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences REP324 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 201 total aligned reads displayed.

ACCAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCTT  >  NC_000913/4323151‑4323349
                                                                                                   |                                                                                                   
cgcgctaagcgcgatgagttcggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatg                                                                                                     <  2:3011249‑M1/1‑1 (MQ=255)
acCAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAgg                                                                                                     <  1:528615/100‑1 (MQ=255)
 gcgctaagcgcgatgagttcggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGc                                                                                                    <  1:1569786‑M1/2‑1 (MQ=255)
  cAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGcc                                                                                                   <  2:1137250/100‑1 (MQ=255)
  aaaCACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGTCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGcc                                                                                                   >  1:1604872/2‑100 (MQ=255)
   gctaagcgcgatgagttcggtgagtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCg                                                                                                  >  2:2185562‑M1/97‑100 (MQ=255)
   aaCACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCg                                                                                                  <  2:249488/100‑1 (MQ=255)
    acacGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGTGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCgg                                                                                                 <  2:2048943/100‑1 (MQ=255)
    acacGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCgg                                                                                                 <  2:2999481/100‑1 (MQ=255)
      acGGCGAGTACAACGGCCCAGCTCAGAAGCGAGCACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGAt                                                                                               >  1:1452395/1‑100 (MQ=255)
      acGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGAt                                                                                               <  1:291031/100‑1 (MQ=255)
       cGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATa                                                                                              >  2:2766360/1‑100 (MQ=255)
        ggCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATaa                                                                                             >  2:26983/1‑100 (MQ=255)
         gCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAg                                                                                            >  2:2578142/1‑100 (MQ=255)
             gTACAACGGCCCAGCTCAGAAGCGATAACCATCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGc                                                                                        <  1:2885819/100‑1 (MQ=255)
             gTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGc                                                                                        >  2:1325753/1‑100 (MQ=255)
             gTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGc                                                                                        >  1:3337665/1‑100 (MQ=255)
              tACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCt                                                                                       <  1:1858527/100‑1 (MQ=255)
               aCAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCtt                                                                                      >  1:431125/1‑100 (MQ=255)
               aCAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCtt                                                                                      <  1:3397571/100‑1 (MQ=255)
                 aaCGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGc                                                                                    <  2:1375284/100‑1 (MQ=255)
                  aCGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCa                                                                                   <  1:2809352/100‑1 (MQ=255)
                    ggCCCAGCTCAGAAGCGAGAACCGGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCAcc                                                                                 <  1:621520/100‑1 (MQ=255)
                    ggCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCAcc                                                                                 <  1:1362182/100‑1 (MQ=255)
                    ggCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCAcc                                                                                 <  1:1172993/100‑1 (MQ=255)
                     gCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGGGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGGGCTTGCACCg                                                                                <  1:938085/100‑1 (MQ=255)
                      cccAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGc                                                                               >  1:3504643/1‑100 (MQ=255)
                       ccAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCa                                                                              <  1:248301/100‑1 (MQ=255)
                        cAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCAt                                                                             <  2:1234661/100‑1 (MQ=255)
                          gtaaagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATcc                                                                           <  2:1119608‑M1/27‑1 (MQ=255)
                           cTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCg                                                                          >  2:3254480/1‑100 (MQ=255)
                             cAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                        <  2:1762498/100‑1 (MQ=255)
                             aagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                        >  1:1119601‑M1/71‑100 (MQ=255)
                             aagcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGc                                                                        >  1:1787548‑M1/71‑100 (MQ=255)
                              agcggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCa                                                                       >  1:2299412‑M1/70‑100 (MQ=255)
                              aGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCa                                                                       <  1:107184/100‑1 (MQ=255)
                                cggtgcagtaaatcgtagggcggataagacgccccggcgtcgcatccgactatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCATc                                                                     >  2:2064282‑M1/68‑100 (MQ=255)
                                 ggtgcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCATCa                                                                    >  2:2151927‑M1/67‑100 (MQ=255)
                                 aGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCa                                                                    <  1:1613370/100‑1 (MQ=255)
                                  gCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCaa                                                                   >  1:2296097/1‑100 (MQ=255)
                                    gcagtaaatcgtaggtcggataagacgccccggcgtcgcatccgacaatgtgcaggcgttgatGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACg                                                                 >  2:619715‑M1/64‑100 (MQ=255)
                                     agaACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGc                                                                >  2:1684665/1‑100 (MQ=255)
                                        aCCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGcc                                                               >  1:3198104/1‑98 (MQ=255)
                                         ccAGCTGCGCTTGGGTGGGTCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGc                                                            <  2:1604879/100‑1 (MQ=255)
                                         ccAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGc                                                            >  1:2316748/1‑100 (MQ=255)
                                         ccAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCACATCCGGCATCAACGCCTGc                                                            <  1:3392559/100‑1 (MQ=255)
                                           aGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGcac                                                          >  2:333520/1‑100 (MQ=255)
                                           aGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGcac                                                          >  1:2109133/1‑100 (MQ=255)
                                            gCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGcaca                                                         <  1:1153668/100‑1 (MQ=255)
                                            gCTGCGCGTGGGTGGGGCGAGGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGcaca                                                         <  1:1343955/100‑1 (MQ=255)
                                             cTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACAt                                                        >  2:1635412/1‑100 (MQ=255)
                                             cTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACAt                                                        >  1:3149775/1‑100 (MQ=255)
                                              tGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACAtt                                                       >  2:3442870/1‑100 (MQ=255)
                                                 gcTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTc                                                    >  2:1151210/1‑100 (MQ=255)
                                                   ttGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCg                                                   <  1:1908516/99‑1 (MQ=255)
                                                      ggtgggGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATg                                               >  2:609755/1‑100 (MQ=255)
                                                       gtgggGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGc                                              <  2:1495863/100‑1 (MQ=255)
                                                       gtggcGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGc                                              <  2:2303705/100‑1 (MQ=255)
                                                        tgggGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCg                                             <  1:2602424/100‑1 (MQ=255)
                                                          gggCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGAc                                           >  1:46160/1‑100 (MQ=255)
                                                              gatggtgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCg                                       <  2:3274155/100‑1 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                  >  1:865842/1‑100 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                  <  1:1252659/100‑1 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                  >  1:1700623/1‑100 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                  <  1:798332/100‑1 (MQ=255)
                                                                   tgatggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                  >  1:1769018/1‑100 (MQ=255)
                                                                   tgatggtTTGCATGTCTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCg                                  <  2:3493928/100‑1 (MQ=255)
                                                                     atggtTTGTATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTc                                >  1:2215394/1‑100 (MQ=255)
                                                                     atggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACCCCAGCACATTGTCGGATGCGACGCCGGGGCGTc                                <  1:2332448/100‑1 (MQ=255)
                                                                      tggtTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCt                               <  1:3205442/100‑1 (MQ=255)
                                                                         tttGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTAt                            >  2:15708/1‑100 (MQ=255)
                                                                          ttGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATc                           >  2:704468/1‑100 (MQ=255)
                                                                          ttGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATc                           >  1:181712/1‑100 (MQ=255)
                                                                           tGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATcc                          <  1:2764435/100‑1 (MQ=255)
                                                                           tGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATcc                          <  2:1474298/100‑1 (MQ=255)
                                                                            gCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCCCGGCGTCGCATcc                          <  2:336381/99‑1 (MQ=38)
                                                                             cATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGa                        >  1:330306/1‑100 (MQ=255)
                                                                              aTGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATAAGACGCCCCGGCGTCGCATCCGAc                       <  1:591313/100‑1 (MQ=25)
                                                                               tGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGAcc                      >  2:2855183/1‑100 (MQ=255)
                                                                                  ttGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTAc                   <  2:2316762/100‑1 (MQ=255)
                                                                                   tGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACg                  <  2:2893240/100‑1 (MQ=255)
                                                                                    gacTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGa                 >  2:3290918/3‑100 (MQ=255)
                                                                                     gCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGAt                >  2:1655252/1‑100 (MQ=255)
                                                                                     gCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGAt                <  2:578982/100‑1 (MQ=255)
                                                                                      cTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGAtt               >  1:1972190/1‑100 (MQ=255)
                                                                                        ccGGTTTGTAGTCCGGATAAGGTGCTTGCACCGCATCCGGCATGACCGCCGGCACGTTGTCGGATGAGACGCCGGGGCGTCTTATCCGCCCTACGAttca             <  1:2252133/100‑3 (MQ=37)
                                                                                         cGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTAc            <  1:659064/100‑1 (MQ=255)
                                                                                         cGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTAc            <  1:767645/100‑1 (MQ=255)
                                                                                          ggTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACt           >  2:3066091/1‑100 (MQ=255)
                                                                                          ggTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACt           <  2:1254901/100‑1 (MQ=255)
                                                                                          ggTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACt           >  2:315447/1‑100 (MQ=255)
                                                                                               gTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCAcc      <  2:2385465/100‑1 (MQ=255)
                                                                                                tAGGCCGGATAATGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTTTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCg     <  2:1737988/100‑1 (MQ=255)
                                                                                                 aGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGc    <  2:2655098/100‑1 (MQ=255)
                                                                                                 aGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGc    >  1:3253101/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGc    >  2:1933944/1‑99 (MQ=255)
                                                                                                  ggCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCt   >  1:791382/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCt   >  2:2455581/1‑100 (MQ=255)
                                                                                                  ggCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGACTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCt   >  1:2687880/1‑100 (MQ=255)
                                                                                                   GCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCtt  >  2:871189‑M1/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
ACCAACACGGCGAGTACAACGGCCCAGCTCAGAAGCGAGAACCAGCTGCGCTTGGGTGGGGCGATGGTGATGGTTTGCATGTTTGGCTCCGGTCTGTAGGCCGGATAAGGTGCTTGCACCGCATCCGGCATCAACGCCTGCACATTGTCGGATGCGACGCCGGGGCGTCTTATCCGACCTACGATTTACTGCACCGCTT  >  NC_000913/4323151‑4323349

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.