New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4467477 =137 (1.070)8 (0.070) 7/162 NT 6.1% coding (47/54 nt) mgtL regulatory leader peptide for mgtA
?NC_000913 4467511 = 122 (1.050)intergenic (+27/‑114) mgtL/mgtA regulatory leader peptide for mgtA/magnesium transporter
Rejected: Frequency below cutoff threshold.

Only 100 of 171 total aligned reads displayed.

TTATTGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAGGCTTCGCC  >  NC_000913/4467378‑4467574
                                                                                                   |                                                                                                 
actgtctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcat                                                                                                   <  2:1758073‑M1/1‑1 (MQ=255)
  tgtctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTcc                                                                                                 >  1:140606‑M1/98‑100 (MQ=255)
  attGGATTCTCCTTATTATTTGCGGCGCTTTTTTCCCTTACCGGAGGTTATATGGAACCTGCTCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTcc                                                                                                 <  1:550036/100‑1 (MQ=255)
  attGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTcc                                                                                                 <  2:1652454/100‑1 (MQ=255)
  attGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTcc                                                                                                 <  2:1321207/100‑1 (MQ=255)
  attGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTcc                                                                                                 <  1:3317416/100‑1 (MQ=255)
   gtctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCg                                                                                                <  1:2269719‑M1/4‑1 (MQ=255)
   gtctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCg                                                                                                >  2:1146712‑M1/97‑100 (MQ=255)
   gtctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCg                                                                                                <  1:3416130‑M1/4‑1 (MQ=255)
    tGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCgg                                                                                               <  2:375906/100‑1 (MQ=255)
    tGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCgg                                                                                               <  1:3453613/100‑1 (MQ=255)
    tGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCgg                                                                                               <  2:767938/100‑1 (MQ=255)
     ctgaaacagtacagaaatgtcttcatgcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCgg                                                                                               >  1:3138917‑M1/95‑99 (MQ=255)
     ctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCGGt                                                                                              >  2:458121‑M1/95‑100 (MQ=255)
     ctgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCGGt                                                                                              <  2:1391515‑M1/6‑1 (MQ=255)
      tgaaacagtacagaaatgtcttcaggcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCGGTa                                                                                             <  2:3435841‑M1/7‑1 (MQ=255)
      gATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTa                                                                                             >  2:2193755/1‑100 (MQ=255)
        ttCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTa                                                                                             <  1:2045014/98‑1 (MQ=255)
          ctcCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGcc                                                                                         <  1:178102/100‑1 (MQ=255)
             catattttTTGCGGCGCTTTTTTCGCCCACTGTACGGTATATGGAACCTGTTCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTa                                                                                             <  1:1006808/91‑1 (MQ=255)
             cTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGt                                                                                      >  2:1241480/1‑100 (MQ=255)
             cTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGt                                                                                      >  1:1795844/1‑100 (MQ=255)
                  tattTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCtttt                                                                                 >  1:2224087/1‑100 (MQ=255)
                     ttGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCAc                                                                              <  2:2754703/100‑1 (MQ=255)
                     ttGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCAc                                                                              <  1:1726634/100‑1 (MQ=255)
                      tGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCTGTAAGCCCGTCTTTTCAc                                                                              <  2:1529516/99‑1 (MQ=255)
                      tGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACg                                                                             <  2:1795853/100‑1 (MQ=255)
                       gcggcgCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACgg                                                                            <  2:220855/100‑1 (MQ=255)
                       gcggcgCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACgg                                                                            <  1:1878341/100‑1 (MQ=255)
                         ggcgCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCg                                                                          <  1:2896059/100‑1 (MQ=255)
                          gcgcATTTTTCACTTACTGAAGGTTATATGGAACCGGATCCCACGCTTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCg                                                                          <  1:716702/99‑1 (MQ=255)
                           cacTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGtt                                                                        <  1:2150593/98‑1 (MQ=255)
                             cTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTAc                                                                      <  2:3036831/100‑1 (MQ=255)
                               tttttCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCg                                                                    >  2:536005/1‑100 (MQ=255)
                               tttttCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCg                                                                    >  2:1722808/1‑100 (MQ=255)
                               gcgtggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCGGTAAGCCCGTCTTTTCACGGCGTTACCg                                                                    >  2:877377‑M1/69‑100 (MQ=255)
                                ttttCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCgg                                                                   <  1:3205219/100‑1 (MQ=255)
                                 tttCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCgg                                                                   >  2:1046749/1‑99 (MQ=255)
                                 tttCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGa                                                                  >  2:3346843/1‑100 (MQ=255)
                                  ttCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACTGGa                                                                  >  2:1946613/1‑99 (MQ=255)
                                   tCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATg                                                                <  2:2169442/100‑1 (MQ=255)
                                   ggcgaagccttacctgaaggtaataaagctgagcagggacgttaaaacgtcacggccttacgcaTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATg                                                                >  2:2810046‑M1/65‑100 (MQ=255)
                                       aagccttacctgaaggtaataaagctgagcagggacgttaagacgtcacggccttacgcaTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTa                                                            >  1:353544‑M1/61‑100 (MQ=255)
                                        tACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTaa                                                           >  2:2227534/1‑100 (MQ=255)
                                        tACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTaa                                                           <  2:204896/100‑1 (MQ=255)
                                        tACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTa                                                            >  2:791836/1‑99 (MQ=255)
                                          ccGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAgg                                                         >  2:2623891/1‑100 (MQ=255)
                                           cGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTATTTTCACGGCGTTACCGGATGCGTAAGGc                                                        >  1:2718704/1‑100 (MQ=255)
                                            ggAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGcc                                                       >  1:231914/1‑100 (MQ=255)
                                                gTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTTACGGCGTTACCGGATGCATAAGGCCGTg                                                    >  1:2530275/1‑99 (MQ=255)
                                                gTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGa                                                   <  2:6543/100‑1 (MQ=255)
                                                gTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGa                                                   <  1:1722800/100‑1 (MQ=255)
                                                gTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGCCTTTTCACGGCGTTACCGGATGCGTCAGGCCGt                                                     >  1:1517457/1‑98 (MQ=255)
                                                    tatGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGtt                                               <  2:1519065/100‑1 (MQ=255)
                                                      tGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGtttt                                             <  1:2850187/100‑1 (MQ=255)
                                                      tGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGtttt                                             >  2:2134255/1‑100 (MQ=255)
                                                        gAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTaa                                           >  1:164549/1‑100 (MQ=255)
                                                         aaCCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAAc                                          <  2:1156768/100‑1 (MQ=255)
                                                          aCCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACg                                         <  1:550958/100‑1 (MQ=255)
                                                           ccTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGt                                        >  2:2635615/1‑100 (MQ=255)
                                                             tGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTTTCGTCTTTTCCGGATGCGTAAGGCCGTGACGTTTTAACg                                         >  1:3138118/1‑97 (MQ=255)
                                                             tGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTcc                                      <  2:3361990/100‑1 (MQ=255)
                                                                tCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTg                                   <  2:2300152/100‑1 (MQ=255)
                                                                 cgatctccTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGc                                  <  2:1843990/94‑1 (MQ=255)
                                                                 cccACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGc                                  >  2:551965/1‑100 (MQ=255)
                                                                  ccACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCt                                 >  2:2008537/1‑100 (MQ=255)
                                                                  ccACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCt                                 <  1:761536/100‑1 (MQ=255)
                                                                      gCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGc                             <  2:2431221/100‑1 (MQ=255)
                                                                       ccTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCt                            <  1:1046742/100‑1 (MQ=255)
                                                                          ctcCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTtta                         <  1:386633/100‑1 (MQ=255)
                                                                          ctcCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTtta                         <  1:1102610/100‑1 (MQ=255)
                                                                           tcCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTttat                        <  1:63375/100‑1 (MQ=255)
                                                                            cccTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTttatt                       >  1:2991127/1‑100 (MQ=255)
                                                                             ccTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTttatta                      >  2:282905/1‑100 (MQ=255)
                                                                             ccTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCCTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTttatta                      >  1:1899949/1‑100 (MQ=255)
                                                                              cTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTAc                     <  2:3435798/100‑1 (MQ=255)
                                                                               tCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTAcc                    <  2:32680/100‑1 (MQ=255)
                                                                               tCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTAcc                    <  1:3335193/100‑1 (MQ=255)
                                                                                cGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCt                   >  2:3238917/1‑100 (MQ=255)
                                                                                  aCGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTc                 <  2:2964914/100‑1 (MQ=255)
                                                                                   cGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCa                >  2:713657/1‑100 (MQ=255)
                                                                                   cGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCa                >  2:3192674/1‑100 (MQ=255)
                                                                                   cGGAGAGTAAAACTTTTCCGGTAAGCCCGTGTTTTCTCGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCa                <  1:258561/100‑1 (MQ=255)
                                                                                    ggAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCTTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAg               <  1:290225/100‑1 (MQ=255)
                                                                                     gagaTTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCCCAGCTTTATTACCTTCAgg              <  1:226774/100‑1 (MQ=255)
                                                                                      agaTTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAgg              <  2:2361922/99‑1 (MQ=255)
                                                                                       gaTTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTa            >  2:1553541/1‑100 (MQ=255)
                                                                                       gaTTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTa            <  2:2447858/100‑1 (MQ=255)
                                                                                        aTTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTaa           <  2:919446/100‑1 (MQ=255)
                                                                                        aTTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTaa           >  2:3307196/1‑100 (MQ=255)
                                                                                          tAAGACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTGACGTCCCTGCTCAGCTTTATTACCTTCa                <  1:3252037/93‑1 (MQ=255)
                                                                                          tAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAgg         <  2:1686999/100‑1 (MQ=255)
                                                                                          tAAAACGTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAgg         <  2:2893559/100‑1 (MQ=255)
                                                                                           aaaaCTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAGGc        <  2:441654/100‑1 (MQ=255)
                                                                                             aaCTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTGAAGGTaataaag      <  2:1899959/100‑6 (MQ=255)
                                                                                             aaCTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTGAAGGTaataaag      <  2:2276176/100‑6 (MQ=255)
                                                                                              aCTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAGGCTTc     <  2:803065/100‑1 (MQ=255)
                                                                                                ttttCCGGTAATCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCCGCTTTATTACCTTCAGGTAAGGCTTCGc   >  1:868837/1‑100 (MQ=255)
                                                                                                 tttCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAGGCTTCGcc  <  1:2129204/100‑1 (MQ=255)
                                                                                                 tttCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAGGCTTCGcc  <  1:1984730/100‑1 (MQ=255)
                                                                                                   |                                                                                                 
TTATTGGATTCTCCTTATTATTTGCGGCGCTTTTTTCACTTACCGGAGGTTATATGGAACCTGATCCCACGCCTCTCCCTCGACGGAGATTAAAACTTTTCCGGTAAGCCCGTCTTTTCACGGCGTTACCGGATGCGTAAGGCCGTGACGTTTTAACGTCCCTGCTCAGCTTTATTACCTTCAGGTAAGGCTTCGCC  >  NC_000913/4467378‑4467574

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.