New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	526259 =	NA (NA)	10 (0.080)	5/168	NT	100%	coding (2999/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor
	?	NC_000913	526275 =	0 (0.000)					coding (3015/4281 nt)	rhsD	Rhs protein with DUF4329 family putative toxin domain; putative neighboring cell growth inhibitor

CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526176‑526374                                                                                                    |                                                                                                    gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:1298170‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  2:458116‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:2669600‑M2/1‑1 (MQ=255) gtttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  2:1135781‑M2/1‑1 (MQ=255) gttcacgcgagagcgacatccaccccgtcagttcacgctcccgccgccacacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctc                                                                                                     <  1:1158594‑M2/1‑1 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  2:3296363‑M2/2‑1 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    >  2:2657218‑M2/99‑100 (MQ=255)  tttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCg                                                                                                    <  2:1309342‑M2/2‑1 (MQ=255)   ttccgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   <  2:3158331‑M2/3‑1 (MQ=255)   ttacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGa                                                                                                   >  2:1064411‑M2/98‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  <  2:2174108‑M2/4‑1 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  2:1613283‑M2/97‑100 (MQ=255)    tacgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  >  2:1510041‑M2/97‑100 (MQ=255)     acgcgacagcgacttccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1161736‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtaggggtagcggctctcgaac                                                                                                 >  2:1248466‑M2/96‑98 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:448209‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:559684‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:1978826‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  2:2975422‑M2/5‑1 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 >  2:2192409‑M2/96‑100 (MQ=255)     acgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 <  1:3162807‑M2/5‑1 (MQ=255)      cgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAcc                                                                                                 >  1:3088856‑M2/95‑99 (MQ=255)      cgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagaggtagcggctctCGAc                                                                                                  <  1:2154217‑M2/4‑1 (MQ=255)      cgcgacagcgacatccaccccgtcaggtcacgctcccgccgccagacccgttttgccattcgccgtcccagcgggtcgtagagggagcggctctCGAcc                                                                                                 >  1:3285135‑M2/95‑99 (MQ=255)                                                                       tcccagcgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgc                               >  1:3374738‑M2/30‑100 (MQ=255)                                                                             cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  2:178284‑M2/24‑100 (MQ=255)                                                                             cgggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  1:15552‑M2/24‑100 (MQ=255)                                                                              gggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGAtgtcgctgtcgc                         >  1:1153161‑M2/23‑99 (MQ=255)                                                                              gggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTcgcg                        >  2:1680833‑M2/23‑100 (MQ=255)                                                                              gggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTcgcg                        >  2:676062‑M2/23‑100 (MQ=255)                                                                              gggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTcgcg                        >  2:676045‑M2/23‑100 (MQ=255)                                                                               ggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGt                       >  2:1045797‑M2/22‑100 (MQ=255)                                                                               ggtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGGCGCGt                       >  1:2798495‑M2/22‑100 (MQ=255)                                                                                gtcgtagaggtagcggctctCGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTa                      >  2:973668‑M2/21‑100 (MQ=255)                                                                                                    CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  >  2:2191824‑M2/1‑100 (MQ=255)                                                                                                    CGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAt  <  2:1242331‑M2/100‑1 (MQ=255)                                                                                                    |                                                                                                    CGAGCGGACCCACCACTACCACTACGACAGCCAGCACCGCCTGGTGTTCTACACGCGGATACAGCATGGCGAGCCACTGGTCGAGAGCCGCTACCTCTACGACCCGCTGGGACGGCGAATGGCAAAACGGGTCTGGCGGCGGGAGCGTGACCTGACGGGGTGGATGTCGCTGTCGCGTAAACCGGAGGTGACGTGGTAT  >  NC_000913/526176‑526374

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.