New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 2252796 =NA (NA)7 (0.060) 6/164 NT NA noncoding (1/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 2252829 = NA (NA)noncoding (34/91 nt) RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP157 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 160 total aligned reads displayed.

GCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTC  >  NC_000913/2252730‑2252928
                                                                                                   |                                                                                                   
gCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGcc                                                                                                     <  1:749244/100‑1 (MQ=255)
 tgtcattgcctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    >  1:1006514‑M1/66‑100 (MQ=255)
 cTTAAACAACCCTTCCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    >  2:2961716/1‑100 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    >  2:912980/1‑100 (MQ=255)
 cTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCt                                                                                                    >  2:2961674/1‑100 (MQ=255)
      acaacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACaaa                                                                                               >  2:81095/1‑100 (MQ=255)
        aacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTTCAAATc                                                                                             >  1:2938201/1‑100 (MQ=255)
        aacCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATc                                                                                             <  2:470103/100‑1 (MQ=255)
         accctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCa                                                                                            >  2:2793166/1‑100 (MQ=255)
         accctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCa                                                                                            >  1:764372/1‑100 (MQ=255)
          ctgatgcgcaagcttatcaggcctacatttacttgctgaaattgcctgatttgtagGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           >  2:254041‑M1/57‑100 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  1:3491149/100‑1 (MQ=255)
          ccctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  1:366053/100‑1 (MQ=255)
          atctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAg                                                                                           <  1:2174888/98‑1 (MQ=255)
           cctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgg                                                                                          <  1:932726/100‑1 (MQ=255)
           cctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgg                                                                                          <  2:3077498/100‑1 (MQ=255)
            ctaccctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGc                                                                                         <  1:274644/100‑1 (MQ=255)
              accctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAgagat                                                                                       >  2:2174900/1‑96 (MQ=255)
                cctGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAAtt                                                                                     <  1:1548082/100‑1 (MQ=255)
                   gTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCa                                                                                  <  1:874027/100‑1 (MQ=255)
                    tCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAg                                                                                 <  1:1396449/100‑1 (MQ=255)
                    tCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAg                                                                                 <  2:747448/100‑1 (MQ=255)
                       gCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCaa                                                                              >  2:3457925/1‑100 (MQ=255)
                        ccGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAg                                                                             <  2:3244975/100‑1 (MQ=255)
                         cGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGt                                                                            >  2:2029924/1‑100 (MQ=255)
                          gATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAGCGAGTCTTAGCCGGCCTACAAATCAGGCAATTTCAGCAAGTa                                                                           >  1:2494320/1‑100 (MQ=255)
                            tAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTaaa                                                                         <  2:1527711/100‑1 (MQ=255)
                            tAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTaaa                                                                         <  1:2610419/100‑1 (MQ=255)
                             aaCGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAAt                                                                        <  2:3478630/100‑1 (MQ=255)
                              aCGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATg                                                                       >  1:1720991/1‑100 (MQ=255)
                               cgcgCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGt                                                                      <  2:878361/100‑1 (MQ=255)
                                 cgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCTAGTAAATGTAg                                                                    >  2:886912/1‑100 (MQ=255)
                                 cgcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAGATGTa                                                                     >  2:1504684/1‑99 (MQ=255)
                                  gcTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAgg                                                                   <  2:2216879/100‑1 (MQ=255)
                                     ttCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCt                                                                >  1:2906469/1‑100 (MQ=255)
                                      tCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTg                                                               <  2:24463/100‑1 (MQ=255)
                                         ttAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATa                                                            <  2:718387/100‑1 (MQ=255)
                                         ttAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATa                                                            <  1:804093/100‑1 (MQ=255)
                                          tAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAtgc                                                           >  2:2807773/1‑98 (MQ=255)
                                          tAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATaa                                                           <  2:1193300/100‑1 (MQ=255)
                                          tAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATaa                                                           >  1:3290700/1‑100 (MQ=255)
                                          tAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATaa                                                           >  1:1757261/1‑100 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATaa                                                           >  2:3054382/1‑99 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          <  1:3403034/100‑1 (MQ=255)
                                           aGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAg                                                          >  1:2435907/1‑100 (MQ=255)
                                            gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGc                                                         <  2:1836486/100‑1 (MQ=255)
                                            gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGc                                                         >  2:3132634/1‑100 (MQ=255)
                                            gTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGc                                                         >  1:3079431/1‑100 (MQ=255)
                                             tGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCt                                                        <  2:887507/100‑1 (MQ=255)
                                             tGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCATACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCt                                                        <  2:1428603/100‑1 (MQ=255)
                                              gCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCtt                                                       >  2:1678773/1‑100 (MQ=255)
                                                cAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTgc                                                     >  1:1653492/1‑100 (MQ=255)
                                                 aaTGGTGTAACAATGTTGCCGGATGCGACTCTTAACGCGTCTTATCCGGCCTACAAATCAGTCAATTTCAGCAAGTATATGTAGTACTGATAAGCTTgcg                                                    <  1:625494/100‑1 (MQ=37)
                                                     gtgtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATc                                                >  2:1185744/1‑100 (MQ=255)
                                                     gtgtAACAATGTTGCCGGATGCGACGATTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGTAAGTAAATGTAGGCCTGATAAGCTTGAGCa                                                  >  2:567256/1‑98 (MQ=255)
                                                       gtAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAg                                              <  2:353594/100‑1 (MQ=255)
                                                        tAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAgg                                             >  2:2603011/1‑100 (MQ=255)
                                                        naaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAgg                                             >  2:2268806/2‑100 (MQ=255)
                                                         aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGc                                            <  1:435161/100‑1 (MQ=255)
                                                         aaCAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGCCCTGATAAGCTTGCGCATCAGGc                                            >  1:1096859/1‑100 (MQ=255)
                                                            aaTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAAt                                         <  2:623936/100‑1 (MQ=255)
                                                            aaTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAAt                                         <  1:75609/100‑1 (MQ=255)
                                                            aaTGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAAt                                         <  1:3047349/100‑1 (MQ=255)
                                                               taggccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCACGCAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGac                                      >  1:249792‑M2/37‑100 (MQ=255)
                                                               gTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGac                                      >  1:2864008/1‑100 (MQ=255)
                                                                aggccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGaca                                     >  1:1006514‑M2/36‑100 (MQ=255)
                                                                 tGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacac                                    <  2:1918562/100‑1 (MQ=255)
                                                                  gccggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACt                                   >  1:2544448‑M2/34‑100 (MQ=255)
                                                                   CCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTc                                  <  2:3166970‑M1/100‑1 (MQ=255)
                                                                   CCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTc                                  >  1:1229474‑M1/1‑100 (MQ=255)
                                                                    CGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCa                                 >  2:2579247‑M1/1‑100 (MQ=255)
                                                                     ggataagacgcgttaagcgtcttatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCaa                                >  2:1860424‑M2/31‑100 (MQ=255)
                                                                     ggataagacgcgttaagcgtcgcatccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCa                                 >  2:3273049‑M2/31‑99 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATTAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  2:2494336‑M1/1‑100 (MQ=255)
                                                                       ATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGc                              >  2:1447062‑M1/1‑100 (MQ=255)
                                                                         gCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGTAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTa                            >  1:2435150/1‑100 (MQ=255)
                                                                          cGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGacacagatcggaa                           >  2:858312/1‑91 (MQ=255)
                                                                          cGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaa                           >  1:2580979/1‑100 (MQ=255)
                                                                          cGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaa                           >  1:2181165/1‑100 (MQ=255)
                                                                          cGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaa                           >  2:3155702/1‑100 (MQ=255)
                                                                          cGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaa                           >  2:498680/1‑100 (MQ=255)
                                                                           gACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaaa                          <  1:781143/100‑1 (MQ=255)
                                                                            aCGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAc                         <  1:504007/100‑1 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        <  1:2632119/100‑1 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        >  1:1132262/1‑100 (MQ=255)
                                                                             cGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGAGAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAAcc                        <  1:1901736/100‑1 (MQ=255)
                                                                             cGCTTAACGCGGCGTATCCGGCCTTCAAATCAGGAAATTGCAGCAAGTAAATGTAGGCCAGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTaaatc                        <  1:276248/100‑3 (MQ=255)
                                                                               cTTAACGCGTCTTATCCGGCCTACACATCAGGCAATTTCAGAGAGTAAATGCAGGCCTGATTAGCTTACGCATCCGGCAATGACACTCAAGCTAAACCaa                      >  1:1935108/1‑100 (MQ=255)
                                                                                 tAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATa                    <  1:2983089/100‑1 (MQ=255)
                                                                                    cgcgTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAg                 >  2:3411155/1‑100 (MQ=255)
                                                                                       gTCTTATCCGGCCTACAAATCAGGCAATTTCAGCGAGTAAATGTAGGCCTTATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAAc              >  1:2828449/1‑100 (MQ=255)
                                                                                          ttATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCg           <  1:3030711/100‑1 (MQ=255)
                                                                                          ttATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCg           <  1:1615929/100‑1 (MQ=255)
                                                                                          ttATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCg           <  2:1306302/100‑1 (MQ=255)
                                                                                           tATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCgg          >  1:1793134/1‑100 (MQ=255)
                                                                                            atccggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTTCGCATGAGGCAATGACACGCAAGCTAAACCCATAAAGAAc              >  1:2238466‑M2/8‑95 (MQ=255)
                                                                                                ggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATg     >  1:3288480‑M2/4‑100 (MQ=255)
                                                                                                ggcCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATg     >  2:2650625‑M2/4‑100 (MQ=255)
                                                                                                   cTACAAATCAGGCAATTTCAGCAAGTAACTGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATgg    <  1:3113105/98‑1 (MQ=255)
                                                                                                   cTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTc  <  1:3132612/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
GCTTAAACAACCCTACCCTGTCTGCCGATAACGCGCTTTCATTAGTGCCAATGGTGTAACAATGTTGCCGGATGCGACGCTTAACGCGTCTTATCCGGCCTACAAATCAGGCAATTTCAGCAAGTAAATGTAGGCCTGATAAGCTTGCGCATCAGGCAATGACACTCAAGCTAAACCAATAAAGAACCCGGCAATGGTC  >  NC_000913/2252730‑2252928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.