BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3234638 =	NA (NA)	7 (0.060)	6/164	NT	NA	noncoding (1/86 nt)	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences
*	?	NC_000913	3234671 =	NA (NA)	7 (0.060)	6/164	NT	NA	noncoding (34/86 nt)	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP233 (repetitive extragenic palindromic) element; contains 2 REP sequences

Only 100 of 143 total aligned reads displayed.

ATGTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCA  >  NC_000913/3234572‑3234770

 tGTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCt                                                                                                    >  2:3388029/1‑100 (MQ=255)

  gggagttacctgccggatgcggcgtaaacgccttatccggcctacgttcagcacgttactccatgccggataagacgcggcaagcgtcgcatccggccat                                                                                                   >  1:2926653‑M2/98‑98 (MQ=255)

  gTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTg                                                                                                   <  1:1114338/100‑1 (MQ=255)

   tAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgg                                                                                                  <  2:2243330/100‑1 (MQ=255)

   tAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgg                                                                                                  >  1:2634217/1‑100 (MQ=255)

   tAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCAGGATGCGACGCTTGCCGCGTCTTATCCGGCCTgg                                                                                                  >  2:2359712/1‑100 (MQ=255)

    aGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGCTGCCAGAACTGGGCAGACATTGCCGGAGGCGACGCTTGCCGCGTCTTATCCGGcc                                                                                                     <  1:84647/96‑1 (MQ=255)

     gACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAg                                                                                                >  1:3122896/1‑100 (MQ=255)

     gACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAg                                                                                                <  1:2914284/100‑1 (MQ=255)

     gACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAg                                                                                                <  1:2012528/100‑1 (MQ=255)

      aCGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAg                                                                                                <  1:1496514/99‑1 (MQ=255)

      aCGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGt                                                                                               <  2:3333544/100‑1 (MQ=255)

       cGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTa                                                                                              >  2:2155779/1‑100 (MQ=255)

       cGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTa                                                                                              <  2:3092776/100‑1 (MQ=255)

       cGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTa                                                                                              >  2:2773316/1‑100 (MQ=255)

          tGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACg                                                                                           <  1:2294802/100‑1 (MQ=255)

          tGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACg                                                                                           <  2:2470764/100‑1 (MQ=255)

          tGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACg                                                                                           <  2:3363473/100‑1 (MQ=255)

           ggTGACAGGGATTTTTTGTTTTATGGAAGGGCGATTCCAGAACTGGGCAGACATTTCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGt                                                                                          >  1:1487932/1‑100 (MQ=255)

             tGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGCACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGCGTAAc                                                                                            >  1:1599985/1‑96 (MQ=255)

             tGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGc                                                                                        <  1:749119/100‑1 (MQ=255)

             tGACAGGGATTTTTTGTTTTATGGAAGCGCGATCCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGc                                                                                        <  2:1868415/100‑1 (MQ=255)

             tGACAGGGATTTTTTGTTTTATGGAAGCGCGAATCAAGAACTGGGCATACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGc                                                                                        <  1:2116620/100‑1 (MQ=255)

              gACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCt                                                                                       <  1:2867359/100‑1 (MQ=255)

                 aGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGaa                                                                                    <  2:1910533/100‑1 (MQ=255)

                 aGGAATTTTTTGGTTTATGGAAGCGGGATTCAAGAGCTGTGCAGACATTGCCGGATGGGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGa                                                                                     <  1:1945129/99‑1 (MQ=25)

                  gggATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAAc                                                                                   <  1:3090779/100‑1 (MQ=255)

                   ggATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACg                                                                                  <  1:1505715/100‑1 (MQ=255)

                         tttGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGcc                                                                            <  2:1705340/100‑1 (MQ=255)

                         tttGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGcc                                                                            <  2:584046/100‑1 (MQ=255)

                           tGTTTTATGGATGCGCGATTCCAGAACTGGGCAGACATAGCCGGATGCGCCGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCg                                                                           <  1:1352840/99‑1 (MQ=255)

                           tGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCgg                                                                          <  2:1747985/100‑1 (MQ=255)

                            gTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAAGGTAGGCCGGa                                                                         >  1:1992565/1‑100 (MQ=255)

                            gTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGa                                                                         >  2:1022771/1‑100 (MQ=255)

                             ttttATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGAt                                                                        >  1:2404747/1‑100 (MQ=255)

                               ttATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATaa                                                                      <  2:2568847/100‑1 (MQ=255)

                                tATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAg                                                                     >  2:1480387/1‑100 (MQ=255)

                                  tGGAAGCGCGATTCCAGAACGGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTGATCTGGCCTGGAGGAACGTGCTGAACGTAGGCCGGATAAgg                                                                    <  1:3116471/99‑1 (MQ=38)

                                   ggAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAAGGTAGGCCGGGGAAGGCg                                                                  >  2:2565316/1‑100 (MQ=255)

                                   ggAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCg                                                                  >  1:2903428/1‑100 (MQ=255)

                                   ggAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCg                                                                  <  1:611927/100‑1 (MQ=255)

                                    gaggcgcGATTCCAGAACTGGGCAGACAGTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGt                                                                 <  2:1150215/97‑1 (MQ=255)

                                    gAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGt                                                                 >  1:1148024/1‑100 (MQ=255)

                                    gAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGt                                                                 <  2:1056503/100‑1 (MQ=255)

                                     aaGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGtt                                                                <  1:1385423/100‑1 (MQ=255)

                                       gcgcGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGACCGTAGGCCGGATAAGGCGTTTa                                                              <  1:2057917/100‑1 (MQ=255)

                                           gATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTAcgcc                                                          <  2:1731433/100‑1 (MQ=255)

                                           gATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTAcgcc                                                          <  2:1446807/100‑1 (MQ=255)

                                            aTTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTAcgccg                                                         <  2:1082809/100‑1 (MQ=255)

                                                cAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                     >  1:1014593/1‑100 (MQ=255)

                                                cAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                     <  1:2762927/100‑1 (MQ=255)

                                                cAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATc                                                     >  1:575354/1‑100 (MQ=255)

                                                 aGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATcc                                                    <  1:3521927/100‑1 (MQ=255)

                                                  gAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCg                                                   >  1:1717082/1‑100 (MQ=255)

                                                   aaCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCgg                                                  <  2:690437/100‑1 (MQ=255)

                                                    aCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                 >  1:2927790/1‑100 (MQ=255)

                                                    aCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                 <  2:1030020/100‑1 (MQ=255)

                                                    aCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                 <  2:1263747/100‑1 (MQ=255)

                                                    aCTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGc                                                 >  2:3125774/1‑100 (MQ=255)

                                                     cTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGcc                                                <  2:3228912/100‑2 (MQ=255)

                                                     cTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                <  1:2143103/100‑1 (MQ=255)

                                                       gggCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAgg                                              >  1:696960/1‑100 (MQ=255)

                                                        ggCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGt                                             >  1:2325118/1‑100 (MQ=255)

                                                         ttactccaggccggataagacgcggctagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTa                                            >  2:2157131‑M2/43‑100 (MQ=255)

                                                         gCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTa                                            <  1:2636633/100‑1 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCTTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTaatt                                         >  1:281250/1‑98 (MQ=255)

                                                            gACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACt                                         >  1:584969/1‑100 (MQ=255)

                                                               aTTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTccc                                      <  2:2930497/100‑1 (MQ=255)

                                                                ttGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGCACGTAGGCCGGCTAAGGCGTTTACGCCGCATCCGGCAGGTAACTccc                                      >  1:2765779/1‑99 (MQ=255)

                                                                 tGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCa                                     >  1:3054496/1‑99 (MQ=255)

                                                                  GCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAAt                                   <  2:3085006‑M1/100‑1 (MQ=255)

                                                                   ccggataagacgcggcaagcgtcgcatccggcCCGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGACAGGTAACTCCCAATc                                  >  1:2080208‑M2/33‑100 (MQ=255)

                                                                   CCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATc                                  >  2:1916676‑M1/1‑100 (MQ=255)

                                                                   CCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATc                                  >  1:1994932‑M1/1‑100 (MQ=255)

                                                                   CCGGATGCGACGCTGGCCGCGTCTTATCCGGTCTGGAGTAACGTGCGGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATc                                  >  2:1346344‑M1/1‑100 (MQ=255)

                                                                    cggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt                                 >  1:2093074‑M2/32‑100 (MQ=255)

                                                                    CGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt                                 >  1:1573691‑M1/1‑100 (MQ=255)

                                                                     ggataagacgcggcaagcgtcgcatccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCtt                                >  1:824415‑M2/31‑100 (MQ=255)

                                                                     GGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCt                                 <  1:2506489‑M1/99‑1 (MQ=255)

                                                                        TGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc                             <  2:1704678‑M1/100‑1 (MQ=255)

                                                                        TGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTAcc                             >  2:3304504‑M1/1‑100 (MQ=255)

                                                                         gCGACGGTTGCCGCGGCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcg                            <  2:2804245/100‑1 (MQ=255)

                                                                           gACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACcgac                          <  1:3125752/100‑1 (MQ=255)

                                                                              gCTTGCCGCGTCTTATCCGGCCTGGGGTAACGTGCTGCACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCgacgac                       >  1:2260364/1‑100 (MQ=255)

                                                                              gCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCgacgac                       <  1:1022765/100‑1 (MQ=255)

                                                                               cggcaagcgtcgcatccggcCCGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGacgacg                      <  2:2080219‑M2/80‑1 (MQ=255)

                                                                                 tGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTc                    <  2:2110524/100‑1 (MQ=255)

                                                                                   ccGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTccc                  >  2:2682500/1‑100 (MQ=255)

                                                                                   ccGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTccc                  <  2:2991627/100‑1 (MQ=255)

                                                                                    cgccTCTTATCCGGCTCTTAGTACTGTGTTCAACGTAGGCACACTAAGGCGTTTTCGCCGCATCCGCCATGCACCTCCCAATCTTACCGTCGACTTc                    <  1:395161/97‑1 (MQ=255)

                                                                                     gcgTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTccc                  <  1:511846/98‑1 (MQ=255)

                                                                                         cTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTc            >  2:35442/1‑100 (MQ=255)

                                                                                           tATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCAc          <  1:903997/100‑1 (MQ=255)

                                                                                            atccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCCTACCGACGACGTCCCAGCTTCacn         <  1:2101066‑M2/93‑2 (MQ=255)

                                                                                              ccggcCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGc       <  1:2826238‑M2/95‑1 (MQ=255)

                                                                                                ggcCTGGAGTAACGGGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCtt     <  2:2149814‑M2/97‑1 (MQ=255)

                                                                                                  cCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGctttt   <  1:1009563‑M2/99‑2 (MQ=255)

                                                                                                  cCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTc   <  2:2221760‑M2/99‑1 (MQ=255)

                                                                                                   cTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTc   <  1:2214955/99‑1 (MQ=255)

                                                                                                   cTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCa  <  1:35441/100‑1 (MQ=255)

ATGTAGACGATGGTGACAGGGATTTTTTGTTTTATGGAAGCGCGATTCCAGAACTGGGCAGACATTGCCGGATGCGACGCTTGCCGCGTCTTATCCGGCCTGGAGTAACGTGCTGAACGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAGGTAACTCCCAATCTTACCGACGACGTCCCAGCTTCACCGCTTTCA  >  NC_000913/3234572‑3234770

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.