New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 4326350NA (NA)8 (0.070) 5/164 NT NA noncoding (549/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences
?NC_000913 = 4326380 NA (NA)noncoding (579/583 nt) REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences REP325 (repetitive extragenic palindromic) element; contains 12 REP sequences

Only 100 of 244 total aligned reads displayed.

CTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTC  >  NC_000913/4326281‑4326479
                                                                                                    |                                                                                                   
cTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                                                     >  2:143744‑M2/1‑100 (MQ=255)
 tACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCt                                                                                                    >  2:212536/1‑100 (MQ=255)
  aCGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCtt                                                                                                   <  2:2567955/100‑1 (MQ=255)
   cGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTa                                                                                                  >  2:3210742/1‑100 (MQ=255)
   cGGAGGGCGCGAGAATGTGCTGGCCCGATACGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGC                                                                                                     >  1:875769‑M2/1‑97 (MQ=255)
      aGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCg                                                                                               <  2:2951760/100‑1 (MQ=255)
      aGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCg                                                                                               >  1:2655453/1‑100 (MQ=255)
        ggTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGAt                                                                                             <  2:2226365/100‑1 (MQ=255)
         gTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATc                                                                                            >  2:1238211/1‑100 (MQ=255)
           gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                                                          <  1:112224/100‑1 (MQ=255)
           gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                                                          >  2:2642678/1‑100 (MQ=255)
           gCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATcac                                                                                          <  2:2369762/100‑1 (MQ=255)
             gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGagatcgg                                                                                        >  1:2856478/1‑94 (MQ=255)
             gggAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATca                                                                                           <  1:3211272/97‑1 (MQ=255)
                aaTTTGTAGGCCTGATAAGACGCGCAATCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGTCTTACCGATCacaatac                                                                                     <  1:1026569/100‑1 (MQ=255)
                aaTTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatac                                                                                     <  1:2323296/100‑1 (MQ=255)
                   ttGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCacaatacaat                                                                                  <  2:2062531/100‑1 (MQ=255)
                    tGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATc                                                                                 <  1:303336/100‑1 (MQ=255)
                      tAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAg                                                                               <  2:1380297/100‑1 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGtt                                                                             >  1:2202349/1‑100 (MQ=255)
                        ggCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGACCACAATACAATCAGtt                                                                             >  1:1277805/1‑100 (MQ=255)
                          ccTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCt                                                                           >  1:2738043/1‑100 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      >  2:1771325/1‑100 (MQ=255)
                               tAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTc                                                                      >  1:3119096/1‑100 (MQ=255)
                                aaGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTca                                                                     <  1:2031410/100‑1 (MQ=255)
                                   aCGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaa                                                                  <  1:1609018/100‑1 (MQ=255)
                                    cgcgCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACGATACAATCAGTTCTTTTTcaca                                                                   <  1:2068572/98‑1 (MQ=255)
                                    cgcgCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACaaa                                                                 >  1:2254025/1‑100 (MQ=255)
                                     gcgcAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAAc                                                                >  2:3034199/1‑100 (MQ=255)
                                      cgcAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACt                                                               <  2:1511471/100‑1 (MQ=255)
                                         aaGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAg                                                            <  1:2970811/100‑1 (MQ=255)
                                          aGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGa                                                           >  2:2469354/1‑100 (MQ=255)
                                           atctCGCATCAGGCAGTC‑GGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAt                                                          <  1:322200/97‑1 (MQ=25)
                                            cGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAtt                                                         <  2:1177629/100‑1 (MQ=255)
                                            cGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAtt                                                         >  2:57283/1‑100 (MQ=255)
                                            cGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGAtt                                                         <  1:2062613/100‑1 (MQ=255)
                                                  aTCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGtt                                                   <  1:2983404/100‑1 (MQ=255)
                                                  aTCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGtt                                                   <  1:392190/100‑1 (MQ=255)
                                                   tCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGttt                                                  <  1:1503448/100‑1 (MQ=255)
                                                   tCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGttt                                                  >  2:1555098/1‑100 (MQ=255)
                                                       gCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATc                                              <  2:1915445/100‑1 (MQ=255)
                                                       gCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATc                                              <  1:3420820/100‑1 (MQ=255)
                                                       gCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATc                                              >  1:1298391/1‑100 (MQ=255)
                                                       gCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATc                                              <  1:446075/100‑1 (MQ=255)
                                                        cA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCg                                             <  1:949610/100‑1 (MQ=255)
                                                        cA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCg                                             <  1:740370/100‑1 (MQ=255)
                                                        cA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCg                                             >  1:2208865/1‑100 (MQ=255)
                                                           tCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGa                                           >  1:1744715/1‑100 (MQ=255)
                                                                 aCCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCaaaa                                     >  2:327576/1‑100 (MQ=255)
                                                                   cGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAAcc                                   <  2:2729880/100‑1 (MQ=255)
                                                                     ttGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGt                                 <  1:2460254/100‑1 (MQ=255)
                                                                      tGCCGGATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcagaccgacagattgtcg                                           <  1:634858‑M2/89‑59 (MQ=255)
                                                                      tGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGt                                 >  2:1633108/1‑99 (MQ=255)
                                                                      tGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTc                                <  1:2560049/100‑1 (MQ=255)
                                                                       gCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCg                               >  2:2023652/1‑100 (MQ=255)
                                                                        ccGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGa                              >  1:1354389/1‑100 (MQ=255)
                                                                         cGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGan                             <  1:792405/100‑2 (MQ=255)
                                                                          ggATGCGGCGCGAGCGCCTTATCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggcc                            <  1:111202‑M2/100‑74 (MQ=255)
                                                                           gATGCGGCGTAAACGCCTTATCCGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccg                           >  1:1724993‑M2/1‑26 (MQ=255)
                                                                             tGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         <  1:158116/100‑1 (MQ=255)
                                                                             tGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         >  2:728505/1‑100 (MQ=255)
                                                                             tGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         <  2:1715043/100‑1 (MQ=255)
                                                                             tGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTg                         <  2:811758/100‑1 (MQ=255)
                                                                              gcggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  2:1947257/100‑1 (MQ=255)
                                                                              gcggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  1:2240708/100‑1 (MQ=255)
                                                                              gcggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGc                        <  1:3515660/100‑1 (MQ=255)
                                                                               cggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       >  1:681020/1‑100 (MQ=255)
                                                                               cggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       >  2:2739398/1‑100 (MQ=255)
                                                                               cggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       >  1:1244697/1‑100 (MQ=255)
                                                                               cggcgCGAGCGCCTCATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCa                       >  2:424906/1‑100 (MQ=255)
                                                                                ggcgCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCaa                      >  1:3277288/1‑100 (MQ=255)
                                                                                   gcgAGCGCCTTATCCGGCTTACCGATCACAATAAAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGACTTTGCAATCg                   >  1:2332587/1‑100 (MQ=255)
                                                                                     gAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGAt                 <  2:1741233/100‑1 (MQ=255)
                                                                                      aGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATg                <  1:3479938/100‑1 (MQ=255)
                                                                                       gcgcCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGt               <  2:3307972/100‑1 (MQ=255)
                                                                                       gcgcCTTATCAGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGt               <  2:1978651/100‑1 (MQ=255)
                                                                                          ccTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAACCTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATTTTAt            >  1:564402/1‑100 (MQ=255)
                                                                                          ccTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTAt            <  2:1684321/100‑1 (MQ=255)
                                                                                            ttATCCGGCTTACCGATCACAATACAATCAGTTCTTGTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATgg          <  2:2494581/100‑1 (MQ=255)
                                                                                             tATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGt         <  1:2685108/100‑1 (MQ=255)
                                                                                             tATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGt         >  2:1061268/1‑100 (MQ=255)
                                                                                              aTCCGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgc        <  2:469228‑M2/100‑94 (MQ=255)
                                                                                              aTCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTc        >  1:3508920/1‑100 (MQ=255)
                                                                                               tCCGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccg         >  2:1256997‑M2/1‑6 (MQ=255)
                                                                                                ccGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcat      <  2:2232632‑M2/100‑96 (MQ=255)
                                                                                                ccGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcat      >  1:2786935‑M2/1‑5 (MQ=255)
                                                                                                ccGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcat      <  2:616346‑M2/100‑96 (MQ=255)
                                                                                                ccGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTc        >  1:490832/1‑98 (MQ=255)
                                                                                                 cGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgctccctccgtaggccggataaggcgtttacgccgcatc     <  1:1804381‑M2/100‑97 (MQ=255)
                                                                                                 cGGCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatc     <  1:3217121‑M2/100‑97 (MQ=255)
                                                                                                 cGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatc     <  2:2285932‑M2/100‑97 (MQ=255)
                                                                                                 cGGCaacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatc     <  2:3451873‑M2/100‑97 (MQ=255)
                                                                                                 cGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGcc     <  1:2084532/100‑1 (MQ=255)
                                                                                                  ggCaacagtgccacgtgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatcc    >  1:987676‑M2/1‑3 (MQ=255)
                                                                                                  ggCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCt    <  2:2912882/100‑1 (MQ=255)
                                                                                                  ggCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCt    <  1:1070943/100‑1 (MQ=255)
                                                                                                   gCaacggtgccagatgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccctccgtaggccggataaggcgtttacgccgcatccg   >  2:357370‑M2/1‑2 (MQ=255)
                                                                                                   gCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCtt   <  2:542946/100‑1 (MQ=255)
                                                                                                    caacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccgg  <  1:1416433‑M2/100‑100 (MQ=255)
                                                                                                    caacagtgccaactgcctgatgcgacgcttgcgcgtcttatcaggcctacaaattcccgcaccatccgtaggccggataaggcgtttacgccgcatccgg  <  1:2637207‑M2/100‑100 (MQ=255)
                                                                                                    |                                                                                                   
CTACGGAGGGTGCGGGAATTTGTAGGCCTGATAAGACGCGCAAGCGTCGCATCAGGCA‑TCTGGCACCGTTGCCGGATGCGGCGCGAGCGCCTTATCCGGCTTACCGATCACAATACAATCAGTTCTTTTTCACAAACTCAGATTTCAGTTTCATCGGACCAAAACCGTCGATTTTGCAATCGATGTTATGGTCGCCTTC  >  NC_000913/4326281‑4326479

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.