| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 4486252 = | 102 (0.800) | 11 (0.090) | 10/162 | NT | 11.3% | coding (35/1101 nt) | lptF | lipopolysaccharide export ABC permease |
| ? | NC_000913 | 4486291 = | 80 (0.690) | coding (74/1101 nt) | lptF | lipopolysaccharide export ABC permease | |||||
| Rejected: Frequency below cutoff threshold. | |||||||||||
Only 100 of 144 total aligned reads displayed.
GACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGA > NC_000913/4486192‑4486390 | gACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt > 1:2225541/1‑100 (MQ=255)gACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt > 2:1870976/1‑100 (MQ=255)ccggaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAt > 2:2482400‑M1/61‑100 (MQ=255) aCGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc < 2:2751402/100‑1 (MQ=255) aCGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtc < 1:1813973/100‑1 (MQ=255) cGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtct < 2:1703439/100‑1 (MQ=255) cGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGACGATACTCTTCATCTTGCTTTTGAtct > 1:2464108/1‑100 (MQ=255) gaatatcgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 1:853611‑M1/58‑100 (MQ=255) gaatagcgccgtcaaccgctgcgccgaggatcctctctaacttttgaccgaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtctt > 1:1918193‑M1/58‑100 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttct > 2:1929418/1‑100 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttct < 1:350717/100‑1 (MQ=255) gTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGAGATAATCTTCATCTCGCTTTTGAtc > 1:1358076/1‑96 (MQ=255) gTTTTTACGGGCGGATTTAACGTGATAATCATAAGTTATCTGGTGCGGGAGACGCTAAAATGTCAGCAGGCGATACTCTTCATCATGCTTTTGAccttct > 1:279210/1‑100 (MQ=255) tatcgccgtcaaccgcagcgccgaggatcctcgctatcttttgtcagaagaagaTCAAAATCCATCTGGCGATACTCTTCATCTTGCTTTTGAtcttct > 1:1232593‑M1/55‑99 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 1:3398294/100‑1 (MQ=255) ttttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGAtcttcttc < 1:3259281/100‑1 (MQ=255) ttACGGGCGTATTTAAAGTTATAATCATAAGATATCTGGTGCGTGACACGCTCAATTGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 1:3025910/100‑1 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAATATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCCTCTTCTg < 2:909233/100‑1 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTTCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 1:1329557/100‑1 (MQ=255) ttACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg < 2:374668/100‑1 (MQ=255) cgccgtcaaccgctgcgccgaggatcctcactaacttttgacagaagaagaTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTg > 1:1450793‑M1/52‑100 (MQ=255) tACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCGAAAGCCAGCTGGCGATACTCTTCATCTGGCTTTTGAtcttct > 1:2796481/1‑95 (MQ=255) ggCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCaaa > 1:3537323/1‑100 (MQ=255) cGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAg < 2:2520409/100‑1 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg < 2:3536924/100‑1 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg > 2:2203142/1‑100 (MQ=255) tttAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAg > 2:1395342/1‑100 (MQ=255) tAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTg > 2:538322/1‑100 (MQ=255) aaGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAg > 1:3081251/1‑100 (MQ=255) aGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAg < 1:870665/99‑1 (MQ=255) gTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGa < 2:3028950/100‑1 (MQ=255) tGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCACAAGTTAGTGAGGAt > 2:2052353/1‑100 (MQ=255) gATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTAATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATc > 2:896931/1‑100 (MQ=255) tAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCt > 2:3275457/1‑100 (MQ=255) aaTCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTc > 2:3461453/1‑100 (MQ=255) cATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATGCTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgc > 1:1049198/1‑100 (MQ=255) aTAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcg > 1:47113/1‑100 (MQ=255) tAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGgcgc > 2:533807/1‑100 (MQ=255) gATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGc > 2:2747410/1‑100 (MQ=255) gATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGc < 1:2211292/100‑1 (MQ=255) gATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGc > 2:2882271/1‑100 (MQ=255) atCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGt < 1:3280851/100‑1 (MQ=255) cTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTg > 2:1404275/1‑100 (MQ=255) tGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGa < 2:851978/100‑1 (MQ=255) ggTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGAc > 1:1380812/1‑100 (MQ=255) gTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACg < 2:2855145/100‑1 (MQ=255) gTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACg > 2:2683539/1‑100 (MQ=255) tGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACgg > 1:1388839/1‑100 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACggn < 2:3483952/100‑2 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGc < 1:3461428/100‑1 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGc > 1:2654367/1‑100 (MQ=255) gCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGc > 2:1792610/1‑100 (MQ=255) cGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCg > 2:141994/1‑100 (MQ=255) gggAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGa > 1:2559295/1‑100 (MQ=255) agaagatcaaaagcaagatgaagagtatcgccagatggattttgaTCTTCTTCTGACAAAAGATAGCGAGGATCCTCGGCGCTGCGGTTGACGGCGata > 1:1232593‑M2/46‑99 (MQ=255) gaagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATAtt > 2:339279‑M2/45‑100 (MQ=255) aagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTc > 1:853611‑M2/44‑100 (MQ=255) aagatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCGGTCAAAAGTTAGAGAGGATCCTCGGCGCAGCGGTTGACGGCGCTATTc > 1:1918193‑M2/44‑100 (MQ=255) cGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:1059054/1‑100 (MQ=255) agatcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTcc > 2:1898303‑M2/43‑100 (MQ=255) gCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCg < 1:3078251/100‑1 (MQ=255) cTCAAAAGCCAGTTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGGCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg < 1:331281/100‑1 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg > 1:3197587/1‑100 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg > 1:523678/1‑100 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg > 1:1462286/1‑100 (MQ=255) cTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg < 1:3271281/100‑1 (MQ=255) atcaaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCgg > 2:2482400‑M2/41‑100 (MQ=255) caaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCg > 1:541429‑M2/39‑100 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCg > 2:1198469‑M1/1‑100 (MQ=255) CAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCg < 2:2514230‑M1/100‑1 (MQ=255) aaaagcaagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGa > 2:2119774‑M2/38‑100 (MQ=255) AAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGa < 2:789251‑M1/100‑1 (MQ=255) AGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGaa < 1:2856245‑M1/98‑1 (MQ=255) AGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATc < 1:1776564‑M1/100‑1 (MQ=255) aagatgaagagtatcgccagctggcttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCCCGGCGCAGCGGTTGACGGCGATATTCCGGCGAACCTgg > 1:1005992‑M2/32‑100 (MQ=255) aGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGt > 1:2725878/1‑100 (MQ=255) cTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGc < 2:1188173/100‑1 (MQ=255) ggCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAACCTGGTGctc > 1:3022596/1‑100 (MQ=255) gATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTcc > 2:1939398/1‑100 (MQ=255) gATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTcc < 2:1880791/100‑1 (MQ=255) tACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCt > 2:2863180/1‑100 (MQ=255) tctTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTtct > 2:1656472/1‑100 (MQ=255) tcaggttGCTTTTGATCTTCTTCTGTCAAAAGTTATTGAGCATCCTCGGCGCAGCGGTTGCCGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCgg < 1:711492/95‑1 (MQ=255) aTCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGt > 2:3216667/1‑100 (MQ=255) tCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGtt < 1:1656465/100‑1 (MQ=255) tCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGtt > 2:3133720/1‑100 (MQ=255) cTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTg > 1:768796/1‑100 (MQ=255) ttGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTgg > 2:2279775/1‑100 (MQ=255) tgcgtttgaTCTTCTCCTGTCAAAAGTTAGTGAGGATCCTCGCCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTCCTCGGGTTggg < 1:714040‑M2/91‑1 (MQ=255) tGCTTTTGATCTTCTTCTGTCCAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGTATCTGGTGCTCTCCCTTCTCGGGTTggg < 1:770583/100‑1 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGTATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg < 1:3446354/100‑1 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg > 2:2027316/1‑100 (MQ=255) tGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTggg < 2:1618127/100‑1 (MQ=255) cttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCg > 2:2471176‑M2/8‑100 (MQ=255) cttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCg > 1:2737477‑M2/8‑100 (MQ=255) cttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCg > 1:3250470‑M2/8‑100 (MQ=255) cttttgaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCg < 1:1059047‑M2/93‑1 (MQ=255) ttttATCTTGTTCTTTCAAAGGTGAGTGAGGATCCTCGGCGCAGCGTTTGATGGCGATATTGCGGCGGATCTGGTGCTCTCGCTTCTCGGGTTggg > 1:2642745/1‑96 (MQ=255) gaTCTTCTTCTGTCAAAAGTTAGTGCGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGcc < 1:2313436‑M2/97‑1 (MQ=255) gaTCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCg > 2:1142567‑M2/3‑100 (MQ=255) | GACGAGTTTTTACGGGCGTATTTAAAGTGATAATCATAAGATATCTGGTGCGGGAGACGCTCAAAAGCCAGCTGGCGATACTCTTCATCTTGCTTTTGATCTTCTTCTGTCAAAAGTTAGTGAGGATCCTCGGCGCAGCGGTTGACGGCGATATTCCGGCGAATCTGGTGCTCTCCCTTCTCGGGTTGGGCGTGCCGGA > NC_000913/4486192‑4486390 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |