BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	4536087 =	122 (0.950)	9 (0.080)	6/160	NT	7.4%	intergenic (+56/+527)	yjhR/nanS	pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
*	?	NC_000913	4536120 =	115 (1.000)	9 (0.080)	6/160	NT	7.4%	intergenic (+89/+494)	yjhR/nanS	pseudogene, helicase family; putative frameshift suppressor/9‑O‑acetyl N‑acetylneuraminic acid esterase
Rejected: Frequency below cutoff threshold.

Only 100 of 172 total aligned reads displayed.

GTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCA  >  NC_000913/4536021‑4536219

gTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCttt                                                                                                     <  2:2098206/100‑1 (MQ=255)

  attaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTcc                                                                                                   >  1:1409363‑M1/65‑100 (MQ=255)

  attaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTcc                                                                                                   >  2:2089335‑M1/65‑100 (MQ=255)

  attaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTcc                                                                                                   >  1:975972‑M1/65‑100 (MQ=255)

   ttaatcccaggcgcattatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCt                                                                                                  >  2:2229462‑M1/64‑100 (MQ=255)

     cTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGa                                                                                                >  1:2423918/1‑100 (MQ=255)

      tttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAt                                                                                               <  1:1186012/100‑1 (MQ=255)

      tttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAt                                                                                               <  2:2749623/100‑1 (MQ=255)

      tttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAt                                                                                               <  1:2573020/100‑1 (MQ=255)

       ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                              <  2:172751/100‑1 (MQ=255)

       ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                              <  2:2423934/100‑1 (MQ=255)

       ttAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCATTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                              <  2:1817851/100‑1 (MQ=255)

       tcccaagcataatatgcaaaggaaaatgattaggtaaacaataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                              >  1:2555518‑M1/60‑100 (MQ=255)

        tAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGTATATTTTACCAATGTTAAGGTGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGAtt                                                                                              <  1:3441182/99‑1 (MQ=255)

         aaaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtat                                                                                            <  1:187594/100‑1 (MQ=255)

          aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                                                           >  2:425396/1‑100 (MQ=255)

          aaTGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATtata                                                                                           >  1:2817538/1‑100 (MQ=255)

             gtgATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAAt                                                                                        >  2:1038459/1‑100 (MQ=255)

                  gaGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTAt                                                                                   >  1:2854482/1‑100 (MQ=255)

                    gCCGTTCATGATACAGGAGTAGTAAAGGTCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTg                                                                                 >  2:2806870/1‑100 (MQ=255)

                    atgcaaaggaaaatgattaggtaaaccataagatttataatcaggaAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTg                                                                                 >  1:3369618‑M1/47‑100 (MQ=255)

                      cGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGtt                                                                               >  1:3228293/1‑100 (MQ=255)

                       gTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGttt                                                                              >  1:1236430/1‑100 (MQ=255)

                          cATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAcc                                                                           <  1:3039761/100‑1 (MQ=255)

                          cATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAcc                                                                           <  2:363739/100‑1 (MQ=255)

                          cATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTAc                                                                            >  1:632409/1‑99 (MQ=255)

                           aTGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATGATAAATCTTATTGTTTACCt                                                                          <  1:2179812/100‑1 (MQ=255)

                            tGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTa                                                                         >  2:7062/1‑100 (MQ=255)

                            tGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACGTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTa                                                                         >  1:1968367/1‑100 (MQ=255)

                               tACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATc                                                                      >  2:3084147/1‑100 (MQ=255)

                               tACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATc                                                                      >  1:39969/1‑100 (MQ=255)

                                aCAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCa                                                                     >  1:1534515/1‑100 (MQ=255)

                                   ggAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttt                                                                  >  2:188799/1‑100 (MQ=255)

                                   ggAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttt                                                                  >  1:3027858/1‑100 (MQ=255)

                                   ggAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttt                                                                  >  2:3269192/1‑100 (MQ=255)

                                   ggAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAttt                                                                  >  2:3355633/1‑100 (MQ=255)

                                    gAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAtttt                                                                 <  2:3137966/100‑1 (MQ=255)

                                      gtagtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGTGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTc                                                                >  1:1100222/1‑99 (MQ=255)

                                         gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCttt                                                            <  2:974275/100‑1 (MQ=255)

                                         gtaAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCttt                                                            <  1:2060637/100‑1 (MQ=255)

                                          taAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTg                                                           <  1:1271750/100‑1 (MQ=255)

                                          taAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTg                                                           <  2:2156142/100‑1 (MQ=255)

                                           aaaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGc                                                          >  1:3047513/1‑100 (MQ=255)

                                            aaGGTCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                         <  1:2806853/100‑1 (MQ=255)

                                            aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                         >  2:1051483/1‑100 (MQ=255)

                                            aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                         <  2:1833939/100‑1 (MQ=255)

                                            aaGGGCATATTTTACCAATGTTAAGGCGACTTTCCGGTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                         >  1:3230800/1‑100 (MQ=255)

                                             aGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCa                                                         >  1:2322339/1‑99 (MQ=255)

                                             aGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCAt                                                        <  2:1073883/100‑1 (MQ=255)

                                                ncATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAAt                                                     >  1:3222698/2‑100 (MQ=255)

                                                 cATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATg                                                    <  1:317271/100‑1 (MQ=255)

                                                  atatTTTACCAATGTTAGAGCGACTTTCCGTTTTATTGCGATTCGCCTTTAGTGATTATAAGTCTTTTTGTTTACCTAATCTTTTTCCTTTGCAt                                                        >  1:2119114/1‑95 (MQ=255)

                                                  atatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgc                                                   <  1:407696/100‑1 (MQ=255)

                                                  atatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgc                                                   >  2:1527588/1‑100 (MQ=255)

                                                   tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgcg                                                  >  2:2826251/1‑100 (MQ=255)

                                                   tatTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATgcg                                                  >  2:1210278/1‑100 (MQ=255)

                                                         aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg                                            >  1:3336494/1‑100 (MQ=255)

                                                         aCCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTggg                                            <  1:3308150/100‑1 (MQ=255)

                                                           cAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGAt                                          <  1:2888109/100‑1 (MQ=255)

                                                              aggaaaggcgactcgcaataaaacggaaagtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTaa                                       >  2:1734154‑M2/38‑100 (MQ=255)

                                                               ggaaaggcgactcgcaataaaacggaaagtcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAAt                                      >  1:975972‑M2/37‑100 (MQ=255)

                                                               gTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAAt                                      >  2:1574149/1‑100 (MQ=255)

                                                                ttAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATg                                     >  2:455999/1‑100 (MQ=255)

                                                                 tAAGTCGACTTTCCGTTTTATTGCTAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCAGTTTCCTTTGCATACTGCGCCTGGGATTAATgg                                    <  1:1721743/100‑1 (MQ=255)

                                                                 tAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATgg                                    >  2:1485512/1‑100 (MQ=255)

                                                                  AAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGc                                   <  2:2550836‑M1/100‑1 (MQ=255)

                                                                    GGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCgg                                 >  1:1693489‑M1/1‑100 (MQ=255)

                                                                     GCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCggg                                <  2:2950511‑M1/100‑1 (MQ=255)

                                                                     GCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCggg                                >  1:485943‑M1/1‑100 (MQ=255)

                                                                          TTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCtt                           <  2:2337035‑M1/100‑1 (MQ=255)

                                                                             ccGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTa                        >  2:1302629/1‑100 (MQ=255)

                                                                              cGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCtttt                         >  1:2668636/1‑98 (MQ=255)

                                                                              cGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAg                       >  1:2003738/1‑100 (MQ=255)

                                                                              cGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAg                       <  2:3417020/100‑1 (MQ=255)

                                                                                 tttATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCTTGGGATTAATGGCGGGTGCTTTTAGGaa                    >  1:1446219/1‑100 (MQ=255)

                                                                                   tATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATACTGCGCCTGGGATTAATGGCGGGTGATTTTAGGAATg                  >  1:2919406/1‑100 (MQ=255)

                                                                                   tATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATg                  >  2:83370/1‑100 (MQ=255)

                                                                                   tATTGCGAGTCGCCTTTCCTGATTATAAATCCTAGTGGTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAgg                      <  2:3278682/96‑1 (MQ=255)

                                                                                    aTTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGTATTAATGGCGGGTGCTTTTAGGTATg                  >  1:1238941/1‑99 (MQ=255)

                                                                                    aTTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATga                 >  1:191614/1‑100 (MQ=255)

                                                                                      tGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaa               <  2:632412/100‑1 (MQ=255)

                                                                                       gCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATAGCGGGTGCTTTTTGGAATgaaag              >  1:1055333/1‑100 (MQ=255)

                                                                                        cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaaga             >  2:3496801/1‑100 (MQ=255)

                                                                                        cGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCGTTTAGGAATgaaaga             >  2:3499857/1‑100 (MQ=255)

                                                                                         gAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATgaaagaa            <  1:1426136/100‑1 (MQ=255)

                                                                                            tcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAAt         <  2:2242357‑M2/93‑1 (MQ=255)

                                                                                            tcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAAt         >  2:2197757‑M2/8‑100 (MQ=255)

                                                                                            tcgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGAGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAAt         <  1:3293461‑M2/93‑1 (MQ=255)

                                                                                             cgccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATg        <  1:2945827‑M2/94‑1 (MQ=255)

                                                                                              nccTTGCCGGAATAGAAATCTTAGTGTTTACCTAATCATTTTCCTTTGCATAATGTGCCTGGGATTACTGGCGGGTGCTTTTCGGAATGACAGAGAATgc       >  1:3321647/2‑100 (MQ=255)

                                                                                              gccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGc       >  1:2122975‑M2/6‑100 (MQ=255)

                                                                                              gccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGc       >  2:1297200‑M2/6‑100 (MQ=255)

                                                                                              gccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGc       >  1:996873‑M2/6‑100 (MQ=255)

                                                                                              gccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGc       >  2:536346‑M2/6‑100 (MQ=255)

                                                                                               ccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCa      >  2:3208443‑M2/5‑100 (MQ=255)

                                                                                               ccttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCa      <  2:2422248‑M2/96‑1 (MQ=255)

                                                                                                cttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGTCGGGTGCTTTTAGGTATGCAAGAAAATGCaa     >  1:3348277‑M2/4‑100 (MQ=255)

                                                                                                cttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCaa     <  2:679079‑M2/97‑1 (MQ=255)

                                                                                                 ttTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAg    <  1:3269169‑M2/98‑1 (MQ=255)

                                                                                                   tCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATgcaagca  >  2:2048514/1‑100 (MQ=255)

GTCAGCTTTAAATGTGATGAGCCGTTCATGATACAGGAGTAGTAAAGGGCATATTTTACCAATGTTAAGGCGACTTTCCGTTTTATTGCGAGTCGCCTTTCCTGATTATAAATCTTATTGTTTACCTAATCATTTTCCTTTGCATAATGCGCCTGGGATTAATGGCGGGTGCTTTTAGGAATGAAAGAAAATGCAAGCA  >  NC_000913/4536021‑4536219

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.